New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	3091524 =	53 (1.120)	3 (0.080)	3/84	NT	6.9%	intergenic (+40/‑69)	gshB/yqgE	glutathione synthetase/hypothetical protein
	?	W3110S.gb	3091559 =	37 (0.950)					intergenic (+75/‑34)	gshB/yqgE	glutathione synthetase/hypothetical protein

TAAATTCATTGTCAGAGGTTCTGTTTCCTGGTTCAAAAAAGCAACAGCGCCCAGTATGCGTGGAAAGAAGGGCGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/3091601‑3091524 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgctgtTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCATGCC  >  W3110S.gb/3091559‑3091627                                                                                                                                                     TAAATTCATTGTCAGAGGTTCTGTTTCCTGGTTCAAAAAAGCAACAGCGCCCAGTATGCGTGGAAAGAAGG                                                                              >  1:3045216/1‑71    ATTCATTGTCAGAGGTTCTGTTTCCTGGTTCAAAAAAGCAACAGCGCCCAGTATGCGTGGAAAGAAGGGCG                                                                           <  1:3779937/71‑1       CATTGTCAGAGGTTCTGTTTCCTGGTTCAAAAAAGCAACAGCGCCCAGTATGCGTGGAAAGAAGGGCGCT                                                                         >  1:1589686/1‑70       CATTGTCAGAGGTTCTGTTTCCTGGTTCAAAAAAGCAACAGCGCCCAGTATGCGTGGAAAGAAGGGCGCT                                                                         >  1:2882754/1‑70        ATTGTCAGAGGTTCTGTTTCCTGGTTCAAAAAAGCAACAGCGCCCAGTATGCGTGGAAAGAAGGGCGCTGT                                                                       <  1:1458346/71‑1                     CTGTTTCCTGGTTCAAAAAAGCAACAGCGCCCAGTATGCGTGGAAAGAAGGGCGC                                                                          >  1:4107223/1‑55                                            ACAGCGCCCAGTATGCGTGGAAAGAAGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCT                                         <  1:3405721/65‑1                                                 GCCCAGTATGCGTGGAAAGAAGGGCGCTGTTGCTTTTTTGAACCAGGAAACAGAAC                                             >  1:2311029/1‑56                                                       TATGCGTGGAAAGAAGGGCGCTGTTGCTTTTTTGAACC                                                         <  1:488736/38‑1                                                                       GGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGC        <  1:2658569/71‑1                                                                       GGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGC        >  1:1463849/1‑71                                                                       GGCGCTGTTGCTTTTTTGAACCAGGAAACAGAACCTATGACAATGAATTTACAGCATCACTTTCTTATT          <  1:480140/69‑1                                                                        GCGCTGTTGCTTTTTTGAACAAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCC       <  1:3317460/71‑1                                                                          GCTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCAT     <  1:1046600/71‑1                                                                           CTGTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAA                                <  1:2863069/43‑1                                                                             GTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCATGCC  >  1:1670112/1‑71                                                                             GTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCT              <  1:3284014/59‑1                                                                             GTTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCT              <  1:3340326/59‑1                                                                              TTGTTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTA                            >  1:1991278/1‑44                                                                              TTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATT          <  1:1591374/62‑1                                                                                                                                                     TAAATTCATTGTCAGAGGTTCTGTTTCCTGGTTCAAAAAAGCAACAGCGCCCAGTATGCGTGGAAAGAAGGGCGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  W3110S.gb/3091601‑3091524 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgctgtTGCTTTTTTGAACCAGGAAACAGAACCTCTGACAATGAATTTACAGCATCACTTTCTTATTGCCATGCC  >  W3110S.gb/3091559‑3091627

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.