| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | W3110S.gb | 3,746,913 | Δ1,199 bp | 100% | [tnaB]–[tnaB] | [tnaB], insH, [tnaB] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | W3110S.gb | 3746913–3748109 | 3748111 | 3–1199 | 59 [0] | [0] 62 | [tnaB]–[tnaB] | [tnaB],insH,[tnaB] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3746912 | 0 (0.000) | 49 (1.390) | 31/92 | NT | 100% | coding (71/447 nt) | tnaB | tryptophan transporter of low affinity |
| ? | W3110S.gb | 3748112 = | 0 (0.000) | coding (871/984 nt) | tnaB | tryptophan transporter of low affinity | |||||
TTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3746840‑3746912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCG > W3110S.gb/3748112‑3748177 TTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGT > 1:2632769/1‑70 AAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGT > 1:2817187/1‑68 AAACAGGTCCGCCAGATAATCGAACAACCCCAGAGTGACACCAAAGAACGAACTGGCAACAGCTAAGT > 1:757035/1‑68 AACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTA < 1:2330378/69‑1 ACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:1051077/71‑1 CCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACAC > 1:1116413/1‑70 CAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:3114875/61‑1 ATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:2970478/55‑1 TCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAA < 1:1125193/71‑1 TCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCA < 1:1863009/61‑1 GAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACT > 1:1639264/1‑71 AACAACCCCAGCGTGACACCAAAGAACGAACTTGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTC < 1:672675/71‑1 ACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTC > 1:2768676/1‑70 CAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGA > 1:2966178/1‑71 AACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:1288550/71‑1 CCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAA < 1:615964/71‑1 CCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:489316/68‑1 CCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAG < 1:3368976/53‑1 CCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAG < 1:3293403/53‑1 CAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:1410089/1‑45 GCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCG > 1:2746655/1‑71 CGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGT > 1:3372864/1‑71 CGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAG > 1:1120960/1‑51 CGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAG > 1:2400487/1‑51 CGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:3279486/1‑42 CGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:1352225/1‑42 CGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:2894205/1‑42 ACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCA > 1:2508638/1‑50 ACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCA > 1:2134886/1‑50 CACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGT < 1:192898/71‑1 ACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTT > 1:2098410/1‑71 ACCAAAGAACGAACTGCCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:1512160/49‑1 gCAAAGAACGATGTGGCAACTGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTT < 1:59824/70‑1 CCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTT < 1:668791/71‑1 CCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTT < 1:963170/70‑1 CCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:1626036/48‑1 CCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:2137633/48‑1 CAAAGAAGGAACTGGCAACAGCTAAGTTAGAGAACA > 1:835097/1‑36 CAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACA > 1:3476442/1‑36 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACAC > 1:1265892/1‑36 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACAC > 1:2395351/1‑36 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTT > 1:1320089/1‑66 GAACGAACTGGCAACAGCTGAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGT < 1:956971/69‑1 GAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGT < 1:1541283/69‑1 GAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGT < 1:2615139/69‑1 AACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTT < 1:1122941/65‑1 ACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCC < 1:2159368/70‑1 CGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAA > 1:363443/1‑50 CGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAA > 1:2216839/1‑50 AACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGG < 1:3653876/71‑1 AACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAG > 1:201471/1‑70 TGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:2026924/43‑1 GCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGA < 1:3296999/71‑1 CAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAA > 1:2996179/1‑67 ACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTT < 1:2899820/71‑1 CAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTC < 1:518164/71‑1 CAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTC < 1:2862968/71‑1 AGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCA > 1:1269779/1‑71 GCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTT < 1:730611/49‑1 GCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTT < 1:126135/49‑1 TAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAC > 1:695772/1‑69 AGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCC‑AGGAACGATTTCACCAGCG < 1:1827248/71‑1 GTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCG < 1:3654053/71‑1 TTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3746840‑3746912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCG > W3110S.gb/3748112‑3748177 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |