New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	= 809099	32 (0.590)	4 (0.100) +GAATGTGAATAA	4/76	NT	13.1%	coding (581/1290 nt)	bioA	7,8‑diaminopelargonic acid synthase, PLP‑dependent
	?	W3110S.gb	2239936 =	38 (0.700)					intergenic (+102/+141)	yeiA/mglC	predicted oxidoreductase/methyl‑galactoside transporter subunit

CATCAGGCGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/809086‑809099 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCCGGATAAAAC  >  W3110S.gb/2239936‑2239949               ||||||||||||               CATCAGGCGGGCAAGAATGTGAATAAAGGCCGGATAAAA   >  1:1084282/1‑39  ATCAGGCGGGCAAGAATGTGAATAAAGGCCGGATAAAAC  <  1:3390582/39‑1  ATCAGGCGGGCAAGAATGTGAATAAAGGCCGGATAAAA   >  1:1906480/1‑38   TCAGGCGGGCAAGAATGTGAATAAAGGCCGGATAA     <  1:891367/35‑1               ||||||||||||               CATCAGGCGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/809086‑809099 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCCGGATAAAAC  >  W3110S.gb/2239936‑2239949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.