| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 2564137 = | 11 (0.200) | 13 (0.280) +ATGCGGT |
7/86 | NT | 32.2% | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | W3110S.gb | = 3997968 | 53 (0.980) | coding (684/753 nt) | yhiQ | predicted SAM‑dependent methyltransferase | |||||
CATTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/2564206‑2564137‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCGCCAGCGGTGGCGCGTA < W3110S.gb/3997968‑3997948 ||||||| CATTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAA > 1:1317416/1‑71CATTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAA < 1:4148096/71‑1 GGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCG > 1:1960839/1‑71 GGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGC < 1:212881/70‑1 GGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGC < 1:4020096/70‑1 CGCCTCTTTTTGG‑GGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTAT < 1:4083360/70‑1 CCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTC < 1:1795252/71‑1 CTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCG > 1:1208644/1‑71 TTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGC > 1:3193052/1‑69 TTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGC > 1:318518/1‑69 TTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAA > 1:2205092/1‑55 TTTGGCGGATCGGTCGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAA > 1:3984907/1‑55 TTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGC < 1:3907708/70‑1 TGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCG < 1:4189599/70‑1 GGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGC < 1:897414/71‑1 GGATCGGTTGTGCCGGTGACGGTGAAATCACTCACATTTCCTTCCTGAATGCGGTATTC < 1:3904974/59‑1 GGATCGGTTGTGCCGGTGACGGTGAAAGCACTCGCATTTCCTTCCTGAATGCGGTA < 1:1804694/56‑1 TCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCt > 1:3648657/1‑70 TCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCt < 1:1165190/71‑2 TCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATT > 1:508394/1‑55 CGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTA < 1:3670822/52‑1 GGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCtgg < 1:865374/71‑4 GTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGG < 1:2183313/61‑1 GTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTA > 1:4508016/1‑47 GCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTAT < 1:2393401/46‑1 CCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTAT < 1:2264215/45‑1 GTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGC < 1:3186625/50‑1 AATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGG < 1:3022317/42‑1 AATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGG < 1:2841070/42‑1 TCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGC > 1:2524850/1‑46 ||||||| CATTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/2564206‑2564137‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCGCCAGCGGTGGCGCGTA < W3110S.gb/3997968‑3997948 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |