| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3738790 | 126 (2.160) | 5 (0.100) | 3/90 | NT | 4.0% | coding (388/468 nt) | yieI | predicted inner membrane protein |
| ? | W3110S.gb | = 3738797 | 124 (2.360) | coding (381/468 nt) | yieI | predicted inner membrane protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCAGGACATGAAATATCCAATCCGGGTAGACGGGTAATGATTCTGCTCATCACCACACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3738729‑3738790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAA < W3110S.gb/3738797‑3738728 TCAGGACATGAAATATCCAATCCGGGTAGACGGGTAATGATTCTGCTCATCACCACACCTGCATTGCTGG > 1:1897714/1‑70TCAGGACATGAAATATCCAATCCGGGTAGACGGGTAATGATTCTGCTCATCACCACACCTGCATTGCTGG > 1:2603335/1‑70 ATGAAATATCCAATCCGGGTAGACGGGTAATGATTCTGCTCATCACCACACCTGCATTGCTGGCAGGTGTG < 1:1748670/71‑1 ATGAAATATCCAATCCGGGTAGACGGGTAATGATTCTGCTCATCACCACACCTGCATTGCTGGCAGGTGTG < 1:2917458/71‑1 AAATATCCAATCCGGGTAGACGGGTAATGATTCTGCTCATCACCACACCTGCATTGCTGGCAGGTGTGGTG < 1:4930833/71‑1 TGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCG < 1:2500840/42‑1 TGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCG < 1:2997550/42‑1 TGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCG < 1:3519072/42‑1 TGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCG < 1:3580199/42‑1 TGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCG < 1:4393177/42‑1 TGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCG < 1:5057352/42‑1 TGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCG < 1:673209/42‑1 TGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCG < 1:793288/42‑1 CATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAA < 1:146045/71‑1 CATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAA < 1:682518/71‑1 CATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGA < 1:3964752/70‑1 TCAGGACATGAAATATCCAATCCGGGTAGACGGGTAATGATTCTGCTCATCACCACACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3738729‑3738790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAA < W3110S.gb/3738797‑3738728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |