| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 18301 = | 81 (1.170) | 8 (0.120) | 4/102 | NT | 9.4% | intergenic (+140/+192) | nhaR/rpsT | DNA‑binding transcriptional activator/30S ribosomal subunit protein S20 |
| ? | minE | 18320 = | 74 (1.090) | intergenic (+159/+173) | nhaR/rpsT | DNA‑binding transcriptional activator/30S ribosomal subunit protein S20 | |||||
TGATACATTCTGAACAAGAATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/18323‑18301‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGT > minE/18320‑18367 TGATACATTCTGAACAAGAATATATCAGCCGATGGTTCTACGATTCTTA < 1:2337010/49‑1 ATACATTCTGAACAAGAATATATCAGCCGATGGTTCTACGATTCTTAAG > 1:843641/1‑49 ATACATTCTGAACAAGAATATATCAGCCGATGGTTCTACGATTCTTAA > 1:830838/1‑48 ATACATTCTGAACAAGAATATATCAGCCGATGGTTCTACGATTCTTA < 1:3433817/47‑1 ATTCTGAACAAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCA > 1:1646036/1‑48 ATTCTGAACAAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCA > 1:2716390/1‑48 TCTGAACAAGAATATATCAGCGGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGT > 1:2071970/1‑63 TCTGAACAAGAATATATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGT > 1:100772/1‑63 TGATACATTCTGAACAAGAATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/18323‑18301‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGT > minE/18320‑18367 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |