New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | = 168886 | 76 (1.100) | 3 (0.050) | 3/100 | NT | 3.8% | coding (188/726 nt) | rpsB | 30S ribosomal subunit protein S2 |
? | minE | = 168904 | 78 (1.180) | coding (206/726 nt) | rpsB | 30S ribosomal subunit protein S2 | |||||
Rejected: Frequency below/above cutoff threshold. |
ATCATCAACCTTGAGAAAACTGTACCGATGTTCAACGAAGCTCTGGCTGAACTGAACAAGATTGCTTCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/168816‑168886 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgAAAAGGATTTTACCTTTGCGAGAAGCAATCTTGTTCAGTTCAGCCAGAGCTTCGTTGAACATCGGTACA < minE/168904‑168836 ATCATCAACCTTGAGAAAACTGTACCGATGTTCAACGAAGCTCTGGCTGAACTGAACAAGATTGCTTCTCG > 1:556023/1‑71 TCATCAACCTTGAGAAAACTGTACCGATGTTCAACGAAGCTCTGGCTGAACTGAACAAGATTGCTTCTCG > 1:3625146/1‑70 TCAACCTTGAGAAAACTGTACCGATGTTCAACGAAGCTCTCGCTGAACTGAACAAGATTGCTTCTCG > 1:2687395/1‑67 TTCAACGAAGCTCTGGCTGAACTGAACAAGATTGCTTCTCGAAAAGGATTTTACCTTT < 1:484054/58‑1 CAACGAAGCTCTGGCTGAACTGAACAAGATTGCTTCTCGAAAAGGATTTTACCTTTGC > 1:1975955/1‑58 GCTGAACTGAACAAGATTGCTTCTCGAAAAGGATTTTACCTTTGCG > 1:855929/1‑46 CGAAAAGGATTTTACCTTTGCGAGAAGCAATCTTGTTCAGTTCAGCCAGAGCTTCGTTGAACATCGGTACA < 1:2899737/71‑1 CGAAAAGGATTTTACCTTTGCGAGAAGCAATCTTGTTCAGTTCAGCCAGAGCTTCGTTGAACATCGGTACA < 1:3369955/71‑1 CGAAAAGGATTTTACCTTTGCGAGAAGCAATCTTGTTCAGTTCAGCCAGAGCTTCGTTGAACATCGGTACA < 1:91947/71‑1 CGAAAAGGATTTTACCTTTGCGAGAAGCAATCTTGTTCAGTTCAGCC < 1:2994815/47‑1 ATCATCAACCTTGAGAAAACTGTACCGATGTTCAACGAAGCTCTGGCTGAACTGAACAAGATTGCTTCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/168816‑168886 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgAAAAGGATTTTACCTTTGCGAGAAGCAATCTTGTTCAGTTCAGCCAGAGCTTCGTTGAACATCGGTACA < minE/168904‑168836 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |