| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 170738 | 70 (1.010) | 5 (0.080) | 3/92 | NT | 7.8% | coding (59/726 nt) | pyrH | uridylate kinase |
| ? | minE | = 170755 | 56 (0.920) | coding (76/726 nt) | pyrH | uridylate kinase | |||||
GTCTCAGGAAAGAAACATGGCTACCAATGCAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/170664‑170738‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaagcCTTCAGTGCCCTGCAGAGCTTCGCCACTCAACTTAAGCAGAATGCGTTTATAGACGGGTTTTGCATTGGT < minE/170755‑170686 GTCTCAGGAAAGAAACATGGCTACCAATGCAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCG < 1:2365365/71‑1 TCTCAGGAAAGAAACATGGCTACCAATGGAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCGA < 1:3966295/71‑1 TCTCAGGAAAGAAACATGGCTACCAATGCAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCGA < 1:2613001/71‑1 TCTCAGGAAAGAAACATGGCTACCAATGCAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCGA < 1:3814295/71‑1 TCTCAGGAAAGAAACATGGCTACCAATGCAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCG > 1:1212910/1‑70 TCTCAGGAAAGAAACATGGCTACCAATGCAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCG > 1:578578/1‑70 TCAGGAAAGAAACATGGCTACCAATGCAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCGAAG > 1:924781/1‑71 AACATGGCTACCAATGCAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCGAAG > 1:2367642/1‑61 CCAATGCAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCGAAGCCTTCAGTGCCCTGCAGAGC > 1:3487781/1‑71 AATGCAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCGAAGCCTTCAGTGCCCTGCAGAGCTT > 1:1835801/1‑71 CGCATTCTGCTTAAGTTGAGTGGCGAAGCCTTCAGTGCCCTGCAGAGCTTC > 1:2801247/1‑51 CGCATTCTGCTTAAGTTGAGTGGCGAAGCCTTCAGTGCCCTGCAGAGCTTC > 1:63227/1‑51 CGCATTCTGCTTAAGTTGAGTGGCGAAGCCTTCAGTGCCCTGCAGAGCTTC > 1:192674/1‑51 AAGCCTTCAGTGCCCTGCAGAGCTTCGCCACTCAACTTAAGCAGAATGCGTTTATAGACGGGTTTTGCA > 1:2653405/1‑69 AGCCTTCAGTGCCCTGCAGAGCTTCGCCACTCAACTTAAGCAGAATGCGTTTATA < 1:3985519/55‑1 CCTTCAGTGCCCTGCAGAGCTTCGCCACTCAACTTAAGCAGAATGCGTTTATAGACGGGTTTTGCATTGGT < 1:3479788/71‑1 CCTTCAGTGCCCTGCAGAGCTTCGCCACTCAACTTAAGCAGAATGCGTTTATAGACGGGTTTTGCATTGGT < 1:3474971/71‑1 GTCTCAGGAAAGAAACATGGCTACCAATGCAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/170664‑170738‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaagcCTTCAGTGCCCTGCAGAGCTTCGCCACTCAACTTAAGCAGAATGCGTTTATAGACGGGTTTTGCATTGGT < minE/170755‑170686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |