| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 215622 | 68 (0.990) | 23 (0.710) +TTTAATATCAGTAAACCGGACATAACC |
17/50 | NT | 36.9% | coding (732/732 nt) | dnaQ | DNA polymerase III epsilon subunit |
| ? | minE | 2705182 = | 99 (1.430) | intergenic (+106/‑1) | damX/dam | hypothetical protein/DNA adenine methylase | |||||
GATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/215553‑215622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAAC > minE/2705182‑2705249 ||||||||||||||||||||||||||| GATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAT < 1:3813150/71‑1GATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAT < 1:2391778/71‑1 ATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAT < 1:2639205/70‑1 TGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATT > 1:3897013/1‑69 TGCAGCTCATGAAGCCCGTCGCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATT > 1:3755221/1‑69 GCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATAT < 1:1277390/71‑1 GCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAA < 1:852959/68‑1 CATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAG > 1:1030854/1‑71 CATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAG > 1:2635942/1‑71 AAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAA < 1:914567/70‑1 AAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAA < 1:3077485/70‑1 AAGCCCGTCTCGATCTGGGGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAAT < 1:1657431/62‑1 CCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCG < 1:2257087/71‑1 CCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCG < 1:2462091/71‑1 CCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCG < 1:2846300/70‑1 CGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGA > 1:164748/1‑71 GTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAAT < 1:1465548/56‑1 TCTCGATCTTGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGACCATAATTTAATAT < 1:3378032/57‑1 TCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACA > 1:808848/1‑71 TCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACAT > 1:4030273/1‑70 CGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATAT > 1:3651680/1‑54 CGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATAT > 1:2597718/1‑54 GATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACAT < 1:1965848/68‑1 GATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACAT < 1:1491809/68‑1 CTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCA > 1:1984766/1‑71 CTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCA > 1:903342/1‑71 CTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAA > 1:7268/1‑47 TGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCAT > 1:1027054/1‑71 TGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACA < 1:2068869/60‑1 CAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGA < 1:2982642/71‑1 CAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGA < 1:2832713/71‑1 AGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAA < 1:3409634/71‑1 AGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGA < 1:741195/70‑1 GAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAg > 1:1634837/1‑38 GAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAA < 1:1391806/71‑1 AAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:1779861/36‑1 AGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACAGGACATAACCCATGAAGAAAAA > 1:609105/1‑71 GAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACC > 1:3920082/1‑58 AGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGC > 1:1387166/1‑71 AGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAAC < 1:2578727/44‑1 AGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGT > 1:331963/1‑40 GCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGC < 1:31187/71‑1 GCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCG > 1:2928097/1‑44 GCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGT < 1:1905684/38‑1 GGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTT < 1:2321240/71‑1 GGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTT < 1:3122073/71‑1 AGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTT < 1:2140730/71‑1 GTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACA < 1:3355337/42‑1 GTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACA < 1:1375826/42‑1 GTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACA < 1:1245688/42‑1 GTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACA < 1:568193/42‑1 GCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGA < 1:1074574/70‑1 GCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG > 1:1574411/1‑69 GCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCCTTTTTGA < 1:3898830/70‑1 CCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAG < 1:1356805/71‑1 CTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGT < 1:3642871/71‑1 CTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGT < 1:219000/71‑1 CTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGT < 1:1968977/71‑1 CTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:797969/1‑71 CTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG < 1:4050551/65‑1 tAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAG < 1:1928714/69‑1 GAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGG < 1:3122729/71‑1 GCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTT < 1:3428938/57‑1 TAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG < 1:2968171/55‑1 TAATTTAATATCAGTAAACCGGACATAACCCATGAA > 1:4084355/1‑36 TAATTTAATATCAGTAAACCGGACATAACCCATGAA > 1:3702238/1‑36 ATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTT > 1:1499477/1‑51 TTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTT > 1:2348160/1‑49 TAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTAT > 1:2047014/1‑71 ATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCC > 1:2607080/1‑71 TATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCTAGTATCCC > 1:3959630/1‑71 TATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTT < 1:1013573/45‑1 CAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCC > 1:138944/1‑69 CAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG < 1:3821058/44‑1 TAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTT < 1:3414011/71‑1 AAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCT > 1:235993/1‑69 AAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGT < 1:3916564/59‑1 AACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATC < 1:887933/61‑1 AACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAA > 1:1417531/1‑41 CGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGA < 1:1807411/71‑1 CGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGG > 1:156916/1‑49 GGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCT > 1:810651/1‑64 GGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAA > 1:3142887/1‑52 ACATAACCCATGAAGATAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATAT > 1:1366943/1‑71 ACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGG > 1:2939060/1‑44 ACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGG > 1:3946698/1‑44 CATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATA > 1:3643300/1‑69 ACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAAC > 1:1992291/1‑71 ACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAA < 1:2458781/70‑1 ACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAA < 1:1425273/70‑1 CCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGG < 1:3791428/37‑1 ||||||||||||||||||||||||||| GATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/215553‑215622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAAC > minE/2705182‑2705249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |