| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 344913 | 74 (1.070) | 3 (0.050) | 3/88 | NT | 4.3% | coding (526/678 nt) | ybbL | predicted transporter subunit |
| ? | minE | = 344930 | 71 (1.220) | coding (543/678 nt) | ybbL | predicted transporter subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/344836‑344913‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acataacgATGGATCATCTCATTGACGTTATGTTTATTACTTTCATCCAGCGCACTGGTTATTTCATCCAGCAATAAA < minE/344930‑344861 GTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAA > 1:56951/1‑71 TAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAAC < 1:3139394/71‑1 ACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACAT < 1:3103491/71‑1 ACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACAT < 1:2240968/71‑1 CTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAAC < 1:27903/67‑1 GCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAACG > 1:1221453/1‑71 GCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAAC > 1:2947642/1‑70 TTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAAC < 1:1810663/61‑1 TATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACA > 1:1614659/1‑60 GCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGTATGAAAGTAATAAACAT < 1:2518308/58‑1 GCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACAT < 1:2062325/58‑1 AAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAACGATGGATCATCTCA > 1:60176/1‑71 CTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAACGATGGATCATCTCATTGACGTTATG < 1:507545/70‑1 GATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAACGATGGATCATCTCATTGACGTTATGTTT < 1:2962371/70‑1 ATAACGATGGATCATCTCATTGACGTTATGTTTATTACTTTCATCCAGCGCACTGGTTATTTCATCCAGCA < 1:97793/71‑1 ATAACGATGGATCATCTCATTGACGTTATGTTTATTACTTTCATCCAGCGCACTGGTTATTTCATCCAGC > 1:1051400/1‑70 ATAACGATGGATCATCTCATTGACGTTATGTTTATTACTTTCATCCAGCG < 1:3678815/50‑1 TAACGATGGATCATCTCATTGACGTTATGTTTATTACTTTCATCCAGCGCACTGGTTATTTCATCCAGCAA > 1:2991425/1‑71 TAACGATGGATCATCTCATTGACGTTATGTTTATTACTTTCAT < 1:2922728/43‑1 TAACGATGGATCATCTCATTGACGTTATGTTTATTACTTTCAT < 1:2073611/43‑1 AACGATGGATCATCTCATTGACGTTATGTTTATTACTTTCATCCAGCGCA > 1:3370349/1‑50 AACGATGGATCATCTCATTGACGTTATGTTTATTACTTTCATCCAGCGCA > 1:2669149/1‑50 ACGATGGATCATCTCATTGACGTTATGTTTATTACTTTCATCCAGCGCACTGGTTATTTCATCCAGCAAT > 1:1245963/1‑70 CGATGGATCATCTCATTGACGTTATGTTTATTACTTTCATCCAGCGCACTGGTTATTTCATCCAGCAATAA < 1:3181278/71‑1 CGATGGATCATCTCATTGACGTTATGTTTATTACTTTCATCCAGCGCACTGGTTATTTCATCCAGCAATAA < 1:1137167/71‑1 GATGGATCATCTCATTGACGTTATGTTTATTACTTTCATCCAGCGCACTGGTTATTTCATCCAGCAATAAA < 1:2631060/71‑1 GTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/344836‑344913‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acataacgATGGATCATCTCATTGACGTTATGTTTATTACTTTCATCCAGCGCACTGGTTATTTCATCCAGCAATAAA < minE/344930‑344861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |