| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1015094 | 58 (0.840) | 8 (0.120) | 3/98 | NT | 13.6% | coding (975/1647 nt) | fumA | aerobic Class I fumarate hydratase |
| ? | minE | = 1015113 | 47 (0.720) | coding (956/1647 nt) | fumA | aerobic Class I fumarate hydratase | |||||
CTCTTCCGGGATATATTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1015022‑1015094‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctCTGCTGACCGTAATATCAAAGCGAAGATCAACCGTCAGGGGATCTGGATCGAAAAACTGGAACATAATC < minE/1015113‑1015045 CTCTTCCGGGATATATTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCG > 1:597193/1‑71CTCTTCCGGGATATATTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCG > 1:2622456/1‑71 GATATATTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCT < 1:2394566/64‑1 ATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCG > 1:1324977/1‑44 ATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCG > 1:627148/1‑44 TTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCTCTGCTGACCGTAA < 1:3864837/56‑1 CCAGTTTTTCGATCCAGATCCCCTGAAGGTTGATCTTCGCTCTGCTGACCGTAATA > 1:2940006/1‑56 CCAGTTATTCGATCCAGATCCCCTGACGGTTGATCTTCGCTCTGCTGACCGTAATA > 1:532971/1‑56 GATCCCCTGACGGTTGATCTTCGCTCTGCTGACCGTAATATCAAA < 1:788502/45‑1 GATCCCCTGACGGTTGATCTTCGCTCTGCTGACCGTAATATCAAA < 1:2208118/45‑1 GATCCCCTGACGGTTGATCTTCGCTCTGCTGACCGTAATATCAAA < 1:2240749/45‑1 GATCCCCTGACGGTTGATCTTCGCTCTGCTGACCGTAATATCAAA < 1:2801907/45‑1 GATCCCCTGACGGTTGATCTTCGCTCTGCTGACCGTAATATCAAA < 1:3643163/45‑1 GCTCTGCTGACCGTAATATCAAAGCGAAGATCAACCGTCAGGGGATCTGGATCGAAAAACTGGAACATAA > 1:136886/1‑70 CTCTGCTGACCGTAATATCAAAGCGAAGATCAACCGTCAGGGGATCTGGATCGAAAAACTGGAACATAATC > 1:2975916/1‑71 CTCTGCTGACCGTAATATCAAAGCGAAGATCAACCGTCAGGGGATCTGGATCGAAAAACTGGAACATAATC < 1:3906457/71‑1 CTCTGCTGACCGTAATATCAAAGCGAAGATCAACCGTCAGGGGATCTGGATCGAAAAACTGGAACATAATC > 1:2210042/1‑71 CTCTGCTGACCGTAATATCAAAGCGAAGATCAACCGTCAGGGGATCTGGATCGAAAAACTGGAACATAATC > 1:2141771/1‑71 CTCTGCTGACCGTAATATCAAAGCGAAGATCAACCGTCAGGGGATCTGGATCGAAAAACTGGAACATAATC < 1:1467273/71‑1 CTCTGCTGACCGTAATATCAAAGCGAAGATCAACCGTCAGGGGAT > 1:954185/1‑45 TCTGCTGACCGTAATATCAAAGCGAAGATCAACCGTCAGGGGATCTGGATCGAAA < 1:1698776/55‑1 CTCTTCCGGGATATATTTGCCTGGATTATGTTCCAGTTTTTCGATCCAGATCCCCTGACGGTTGATCTTCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1015022‑1015094‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctCTGCTGACCGTAATATCAAAGCGAAGATCAACCGTCAGGGGATCTGGATCGAAAAACTGGAACATAATC < minE/1015113‑1015045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |