Predicted mutation
evidence seq id position mutation annotation gene description
RA minE 478,203 A→C A97A (GCA→GCC)  cydA → cytochrome d terminal oxidase, subunit I

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE478,2030AC100.0% 799.2 / NA 438A97A (GCA→GCC) cydAcytochrome d terminal oxidase, subunit I
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (0/438);  total (0/438)

Only 100 of 438 total aligned reads displayed.

CGCTGGCAATCGAAGGTCTGATGGCCTTCTTCCTCGAATCCACCTTTGTAGGTCTGTTCTTC  >  minE/478196‑478257
       |                                                      
cgcgGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:631385/62‑1 (MQ=9)
cgcTGGCCATCGAAGGCCTGATGGCTTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:512983/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCTTCGGCCTGttcttc  <  1:295493/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:500599/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:581626/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:559201/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:824896/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:547303/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:532385/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:1004005/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:516113/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:601127/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:487417/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:468362/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:45620/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:436151/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:433000/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:842221/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:416734/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:813025/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:776221/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:762507/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:755179/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:748609/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:800656/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:726829/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:717117/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:691391/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:403223/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:672727/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:666236/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:653606/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:649258/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:639936/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:62000/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:615145/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:989835/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:1087545/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:954877/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:1130359/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:1139410/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:124108/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:129444/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:149032/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:935540/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:921978/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:189395/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:382092/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:983706/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:208633/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:912503/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:1052256/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:257121/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:102887/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:374970/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:359578/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:35385/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:347988/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:340224/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:860180/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:1036881/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:874569/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:288598/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:277265/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:268871/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:879535/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttattc  <  1:592414/62‑1 (MQ=12)
cgcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGACCTGttcttc  <  1:1059346/62‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:915493/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:805121/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:968344/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:961674/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:819947/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:885267/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:831189/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:529300/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:85101/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:234422/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:1011971/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:1057259/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:1058410/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:1069584/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:1109258/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:162648/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:174943/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:20217/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:224451/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:739255/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:243159/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:302983/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:391566/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:427737/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:478797/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:554741/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:567569/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:683072/61‑1 (MQ=12)
 gcTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:733668/61‑1 (MQ=12)
  cTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:8931/60‑1 (MQ=12)
  cTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:328762/60‑1 (MQ=12)
  cTGGCCATCGAAGGCCTGATGGCGTTCTTCCTCGAAGCGACCTTCGTCGGCCTGttcttc  <  1:943666/60‑1 (MQ=12)
       |                                                      
CGCTGGCAATCGAAGGTCTGATGGCCTTCTTCCTCGAATCCACCTTTGTAGGTCTGTTCTTC  >  minE/478196‑478257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑