| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | minE | 1,948,347 | C→A | intergenic (‑38/+81) | gcvP ← / ← gcvH | glycine decarboxylase, PLP‑dependent, subunit (protein P) of glycine cleavage complex/glycine cleavage complex lipoylprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 1,948,347 | 0 | C | A | 100.0% | 318.5 / NA | 97 | intergenic (‑38/+81) | gcvP/gcvH | glycine decarboxylase, PLP‑dependent, subunit (protein P) of glycine cleavage complex/glycine cleavage complex lipoylprotein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (41/56); total (41/56) | |||||||||||
TTCAAGCTGGCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACCTCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATCCTCTCCCGCAGAA > minE/1948283‑1948413 | ttCAAGCTGGCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACatctct > 1:2526223/1‑70 (MQ=255)ttCAAGCTGGCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACAtctctc > 1:2832679/1‑71 (MQ=255)ttCAAGCTGGCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACAtctctc > 1:3049976/1‑71 (MQ=255)ttCAAGCTGGCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACAtctctc > 1:3137611/1‑71 (MQ=255)ttCAAGCTGGCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACAtctctc > 1:2183699/1‑71 (MQ=255)ttCAAGCTGGCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACAtctctc > 1:2163087/1‑71 (MQ=255)ttCAAGCTGGCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACAtctctc > 1:3469034/1‑71 (MQ=255)ttCAAGCTGGCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACAtctctc > 1:2008452/1‑71 (MQ=255)ttCAAGCTGGCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACAtctctc > 1:3587389/1‑71 (MQ=255)ttCAAGCTGGCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACAtctctc > 1:412660/1‑71 (MQ=255) gCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTAc > 1:2276365/1‑67 (MQ=255) gCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACg > 1:3658243/1‑68 (MQ=255) gCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACg > 1:4438152/1‑68 (MQ=255) gCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACg > 1:976287/1‑68 (MQ=255) gCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACg > 1:1359064/1‑68 (MQ=255) cTTAACGTCTGTGTCATTAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:3097615/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:4818722/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:2542011/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:1125792/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:2381402/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:714155/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:3224360/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:695130/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:3408455/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:2246974/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:646739/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:597140/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:1445351/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:1947639/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:3778131/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:1792784/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:1526144/71‑1 (MQ=255) cTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:435968/71‑1 (MQ=255) aaCGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAagagag > 1:200987/1‑71 (MQ=255) aaCGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAagagag > 1:3496913/1‑71 (MQ=255) aaCGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAagagag > 1:3988679/1‑71 (MQ=255) aaCGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAagagag > 1:1376764/1‑71 (MQ=255) aaCGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAagagag > 1:1562059/1‑71 (MQ=255) aCGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgt < 1:4794403/71‑1 (MQ=255) aCGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgt < 1:1095601/71‑1 (MQ=255) aCGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgt < 1:80169/71‑1 (MQ=255) aCGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgt < 1:2874416/71‑1 (MQ=255) aCGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgt < 1:1281466/71‑1 (MQ=255) aCGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgt < 1:250809/71‑1 (MQ=255) aCGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgt < 1:1861875/71‑1 (MQ=255) aCGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgt < 1:2034923/71‑1 (MQ=255) tgtgTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgtgaggg > 1:1674177/1‑71 (MQ=255) tgtgTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgtgaggg > 1:770880/1‑71 (MQ=255) tgtCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgtgagggt < 1:2961610/70‑1 (MQ=255) tgtCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgtgagggt < 1:1919346/70‑1 (MQ=255) tCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:4880372/58‑1 (MQ=255) tCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:1468260/58‑1 (MQ=255) tCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:4012491/58‑1 (MQ=255) tCATGAGCGATGGTTCCCGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:1779196/58‑1 (MQ=255) aTGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgtgagggtgagg > 1:259702/1‑70 (MQ=255) aTGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAaga < 1:4707187/49‑1 (MQ=255) aTGGTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAAt < 1:1445441/70‑1 (MQ=255) ggTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAAtttt > 1:4440667/1‑71 (MQ=255) gTTCCTGAAACGTGCTGTGAATTGTGAACATCTCTCCTTACGAaga < 1:985286/46‑1 (MQ=39) gTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAAtttt < 1:913361/70‑1 (MQ=255) gTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAAtttt < 1:4596226/70‑1 (MQ=255) gTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAAtttt < 1:2914992/70‑1 (MQ=255) gTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAAtttt < 1:4067746/70‑1 (MQ=255) gTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAAtttt < 1:3955753/70‑1 (MQ=255) gTTCCTGAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAAtttt < 1:1969981/70‑1 (MQ=255) gAAACGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCAcc > 1:3037622/1‑71 (MQ=255) aCGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCa > 1:1835876/1‑66 (MQ=255) aCGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCt > 1:888645/1‑70 (MQ=255) aCGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCt > 1:2491077/1‑70 (MQ=255) aCGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCt > 1:2300947/1‑70 (MQ=255) aCGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCt > 1:3560092/1‑70 (MQ=255) aCGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCt > 1:105751/1‑70 (MQ=255) aCGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCt > 1:1276578/1‑70 (MQ=255) aCGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCt > 1:133267/1‑70 (MQ=255) aCGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCt > 1:3365288/1‑70 (MQ=255) aCGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCt > 1:3277970/1‑70 (MQ=255) aCGTGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCt > 1:603021/1‑70 (MQ=255) tGCTGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATc < 1:1170416/71‑1 (MQ=255) tGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAgt < 1:2266214/38‑1 (MQ=255) tGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATc < 1:719913/71‑1 (MQ=255) tGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATc < 1:122819/71‑1 (MQ=255) tGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATc < 1:271414/71‑1 (MQ=255) tGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATc < 1:1324774/71‑1 (MQ=255) tGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATc < 1:2289130/71‑1 (MQ=255) tGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATc < 1:3107381/71‑1 (MQ=255) tGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATc < 1:258123/71‑1 (MQ=255) tGCAGTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACACTGATc < 1:4402231/71‑1 (MQ=255) gTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCa < 1:4810283/59‑1 (MQ=255) gTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCa < 1:704808/59‑1 (MQ=255) gTGAATTGTGAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCa < 1:2290152/59‑1 (MQ=255) gtgAACATCTCTCCTTACGAAGAGAgtgagggtga > 1:4677678/1‑35 (MQ=255) gtgAACATCTCTCCTTACGAAGAGAgtgagggtga > 1:669006/1‑35 (MQ=255) gtgAACATCTCTCCTTACGAAGAGAgtgagggtga > 1:994875/1‑35 (MQ=255) gtgAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATCCTCTccc > 1:3123325/1‑67 (MQ=255) gtgAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATCCTCTCCCg > 1:3864541/1‑68 (MQ=255) gtgAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATCCTCTCCCg > 1:1147291/1‑68 (MQ=255) gAACATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATc < 1:3822503/58‑1 (MQ=255) aaCATCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATCCTCTCCCGCagaa < 1:3174307/70‑1 (MQ=255) | TTCAAGCTGGCTTAACGTCTGTGTCATGAGCGATGGTTCCTGAAACGTGCAGTGAATTGTGAACCTCTCTCCTTACGAAGAGAGTGAGGGTGAGGCATAAATTTTCCTCACCCTGATCCTCTCCCGCAGAA > minE/1948283‑1948413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |