| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1611749 = | 7 (0.140) | 18 (0.430) +ATGCGGT |
12/86 | NT | 46.2% | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | minE | = 2603083 | 42 (0.870) | coding (684/753 nt) | yhiQ | predicted SAM‑dependent methyltransferase | |||||
CATTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1611818‑1611749‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCGCCAGCGGTGGCGCG < minE/2603083‑2603065 ||||||| CATTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAA > 1:1687569/1‑71 GGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCG > 1:395097/1‑71 TCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGG < 1:2931112/64‑1 TTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGC > 1:2870819/1‑69 TTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCG > 1:712096/1‑68 TTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTA > 1:2141486/1‑64 TTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTA > 1:2674662/1‑64 TTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTA > 1:2747966/1‑63 TTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGC > 1:1440947/1‑71 TTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGC > 1:186762/1‑71 TGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGG > 1:619910/1‑71 GCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTG > 1:2718700/1‑71 GGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGG < 1:2205183/70‑1 ATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGC > 1:2906089/1‑71 ATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGC > 1:1206517/1‑71 TCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCt < 1:2550066/71‑2 TCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCt < 1:2056778/71‑2 TCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCt < 1:1464249/71‑2 TCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCt < 1:904597/71‑2 CGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGCt > 1:2494926/1‑69 GGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCG > 1:1307960/1‑61 CCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGC > 1:2838393/1‑40 CGGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTG < 1:1526190/56‑1 GGTGACGGTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTGGCGC > 1:2466383/1‑59 GTGAAATCACTCGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGG < 1:1457744/46‑1 CGCATTTCCTTCCTGAATGCGGTATTCGCCAGCGGTG > 1:2536862/1‑37 ||||||| CATTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1611818‑1611749‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCGCCAGCGGTGGCGCG < minE/2603083‑2603065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |