| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4534139 | 172 (0.930) | 3 (0.020) | 3/258 | NT | 1.9% | intergenic (‑86/+291) | yjhX/yjhZ | UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment |
| ? | NC_000913 | = 4534160 | 158 (0.920) | intergenic (‑107/+270) | yjhX/yjhZ | UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCGGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4533982‑4534139‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gataatcagtTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCTC < NC_000913/4534160‑4534012 GCGGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGA > 1:1279615/1‑150GCGGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATAAAGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCAATGA > 1:210156/1‑150 CGGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGAT > 2:2135239/1‑150 CGGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGAT > 1:1834490/1‑150 CGGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGAT < 1:1840206/150‑1 CGGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGAT < 2:3020699/150‑1 CGGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGAT < 2:1085002/150‑1 GACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAA < 2:2235238/150‑1 GACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAA < 1:2935332/150‑1 ACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAAT > 1:1309872/1‑150 ACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAAT > 1:615198/1‑150 GTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCA > 2:1554620/1‑150 GTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCA < 1:806825/150‑1 GTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCA < 1:799195/150‑1 AGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGT‑‑‑CCGACCTTTTCAGGCCGGA < 1:639139/150‑1 AGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTTCCCCGACCTTTTCAGGCCGGACTGATTATCAA < 2:2053487/150‑1 GGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTTCCCCGACCTTTTCAGGCCGGACTGATTATCAAT < 2:2399424/150‑1 AATCAGTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACAC > 1:1413260/1‑150 AATCAGTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTAACAC > 1:507540/1‑150 TCAGTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGT > 2:1537644/1‑150 AGTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTC < 2:1138184/150‑1 AGTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTC < 2:206789/150‑1 GTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGGATTTATCCCGTCAGGAACAACATACCTTACACGTTCT < 1:2548685/150‑1 GTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCT < 2:73787/150‑1 GTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCT < 2:472899/150‑1 GTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCT < 2:73658/150‑1 GTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCT > 2:1933291/1‑150 GTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCT > 2:1859748/1‑150 GTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCT > 2:1222035/1‑150 GTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCT > 1:561265/1‑150 GTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCT > 1:186844/1‑150 GTTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCACGTCAGGAACAACATACCTTACACGTTCT > 2:2949369/1‑150 TTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCTC < 2:2209714/150‑1 TTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCTC < 2:1659370/150‑1 TTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCTC < 2:684044/150‑1 TTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCTC > 1:2441386/1‑150 GCGGACGTGCGCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4533982‑4534139‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gataatcagtTCCCCGACCTTTTCAGGCCGGACTGATTATCAATGCGCCGAAATCGAATGCGGACACCGCGGTGTGTTTGCACGTTTTGCACATGATGATTAAATAGGTTCTTCAGTATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCTC < NC_000913/4534160‑4534012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |