Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,164,564	0	G	T	33.3%	137.7 / 10.5	83	G157V (GGA→GTA)	nagZ	beta N‑acetyl‑glucosaminidase
Reads supporting (aligned to +/- strand):  ref base G (33/19);  new base T (0/26);  total (33/50)
Fisher's exact test for biased strand distribution p-value = 1.09e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCTTAATCCG  >  NC_000913/1164426‑1164699                                                                                                                                           |                                                                                                                                        tGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCTGCCGGTTTATTGATGGTATGCATGAAGCCGGa                                                                                                                                        <  1:881833/140‑1 (MQ=255) tGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGa                                                                                                                                        <  1:881924/140‑1 (MQ=255)         gATATCAGCTTTGCGGCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATGCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGTAGCCGGAATGTAAAc                                                                                                                                >  2:763421/1‑140 (MQ=255)         gATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCTGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAAc                                                                                                                                >  1:43842/1‑140 (MQ=255)             tCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGAcc                                                                                                                            >  1:390495/1‑140 (MQ=255)                     gggcCTGTGCTGTTTGTCGGCCATATCCGCGCGGCGTTGGGCGAGGGTTATTATCTTGCCTAACCAAAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGTTATGCTTTAAGCCGGAATCAAAACGACCGGGAAaca                                                                                                                    <  1:791957/138‑1 (MQ=255)                     gcgcGTGGGCTGGTTGTGGGGCATATCAGCGGGGCGTTGGGCGAGGGTTCTTATCTTGCCGATCCACAAAACGCCCTGGCAATGGCCCGCGGGTTTATTGTTGGTATGCATGAAGCCGGATTGAACACGACCGGGAAaca                                                                                                                    <  2:1219170/140‑1 (MQ=255)                     gcgcCTGTGCTGGATGTCGGGAATAACAGCGCGGCGATTGGCGAGCGTTATTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGTTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAaca                                                                                                                    <  2:285899/140‑1 (MQ=255)                           gtgCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTccc                                                                                                              >  1:1203378/1‑140 (MQ=255)                           gtgCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTccc                                                                                                              >  1:1307766/1‑140 (MQ=255)                                 tagttCGGGCAAAACAGCGCGGCTTTTGGCGTGCTTTCTTATAATGCCGATCCACAAAACGCCCTGGAAATTGCCAGCCGTTTTTTTTAGGTTATGAATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGaca                                                                                                        <  2:1310439/136‑1 (MQ=255)                                 gttgcggggCATATCAGCGCGGCGATTGGCGAGGGTTCTTATCATGCCTTTCCACAAATAGCCATGGAATTTGCAAGCCGTTTTATTGTTGTTTTGATTTATGCCGTAATGAAAACGACCGGGAAACACTTCCCAGGaca                                                                                                        <  2:796747/134‑1 (MQ=255)                                 gtggTCGGGCATATCCGCGGGGCGTTGGGCGCGGGTGATTATCTGGCCGACCCAAAAAACGCCGTGGCAATGGCCTGCGGTTTTTTTGCTGTCAGGCATGACGCGGCAATGAACACGACCGGGAAACACTTCCCAGGaca                                                                                                        <  1:593208/137‑1 (MQ=255)                                 gATGTCGGGCATATCAGCGGGGCGATTGGGGCGCGTTCTTATCATGCCGAACCACAAAAAGCCCTGGCATTTGCCAGCCGGTTTATTGTTGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGaca                                                                                                        <  2:398911/140‑1 (MQ=255)                                 gATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAATGCCCTGGCAATATCCAGCCGGTGTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGaca                                                                                                        >  2:520221/1‑140 (MQ=255)                                 gATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGaca                                                                                                        >  2:721247/1‑140 (MQ=255)                                 gATGTCGGGCATACCAGCGGGGCGTTGGGCGAGCGTTCTTATCATGCCTATCCACAAAACGCCCTGGCATTTGCCAGCGGTTTTTTTTTTGGTTTGAATGATGCCGTAATGAAAACGACCGGGAAACACTTCCCAGGaca                                                                                                        <  2:1292263/140‑1 (MQ=255)                                 gATGTCGGGAATATCCGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAACCCCTGGCAATTGCCAGCCGTTTTATTGTTGGTATGCATGAAGCCGTAATGAAAACGACCGGGAAACACTTCCCAGGaca                                                                                                        <  2:510585/140‑1 (MQ=255)                                 gATGTCGGGAATACCCGCGCGGCGTTTGGCTTGCGTTCTTATCATGCCGATCCAAAAAAACCCCTGTCATTTGCCCGCGGTTTTATTTATGGTATGAATTACGCCGTAATTAACACGACCGGGAAACACTTCCCAGGaca                                                                                                        <  1:925247/140‑1 (MQ=255)                                    gTCGGGCTTTTCAGCGCGGCGTTTGGGGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCATTTGCCTGCCGGTTTTTTGTTGGTTTGAATGAAGCGGGAATGAAAACGACCGGGAAACACTTCCCAGGACACgg                                                                                                     <  2:502901/140‑1 (MQ=255)                                      cGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAATGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTg                                                                                                   >  1:1477293/1‑140 (MQ=255)                                      cGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTg                                                                                                   >  2:928657/1‑140 (MQ=255)                                      cGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTg                                                                                                   >  1:1479285/1‑140 (MQ=255)                                        ggCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCa                                                                                                 >  1:801724/1‑140 (MQ=255)                                          caattCAGGGCGGCTTTTGGGGAGCTTTATTAACTTGCCGATCCACAAAAATCCCTGGCAATTGCATGCCGGTATATTGATGGATTGCATGAAGCGGTAATCAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGt                                                                                               <  2:1583453/136‑1 (MQ=255)                                           atatCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTa                                                                                              >  2:1587412/1‑140 (MQ=255)                                                     ggcttttGGCGAGCTTTCTTAACATGCCGATCAAAAAAACGCCCTGGAAATTGCCAGCGGTTTTATTGATGGTATGAATGAAGCCGGAATTAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACt                                                                                    <  1:600477/135‑1 (MQ=255)                                                     ggcgTTTGGGGTGGGTTTTTATCTTGCCTATCAACAAAAAGCCCTGGAATTTGCCTGCGGGTTTATTGTTGGTTTGCTTGAAGCGGTAATTAACACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACt                                                                                    <  1:1723610/140‑1 (MQ=255)                                                     ggcgTTTGGCTTGCTTTCTTATCTTGCCTAACCAAAAAACGCCCTGGAATTGGCCAGCGGTTTTATTGTTGGTTTGCATGAAGCCGTAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACt                                                                                    <  1:1635721/140‑1 (MQ=255)                                                       gttttGGCGTGGTTTCTTATCATGCCTATCAACAAAATGCCGTGGAATTTGCCAGCGGTTTTTTTGTTGGTTTGCTTTACGCCGTAATTAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTca                                                                                  <  1:422606/137‑1 (MQ=255)                                                       cgATTGGCGAGCGTTATTATAATGCCGATCAACAAAACGCCGTGGAATTTGCCAGCCGTTTTTTTGATGTTATGAATGAAGCCGGAATTAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTca                                                                                  <  1:1630477/140‑1 (MQ=255)                                                         tttGGGGTGCTTTCTTTTCATGCGTATCCAAAAAAAGCCGTGGAAATTGCCAGCGGGTTTTTTGTTGTTTTGCATGATGCGGTAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTcaca                                                                                <  1:692034/139‑1 (MQ=255)                                                         tttGGCGAGCTTTTTTAAAATGCCGATACAAAAAAAGCCCTGGAAATCGCATGCCTGTTTATTGATGGTTTCAATGAAGCCGTAATGAACACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTcaca                                                                                <  1:1683966/139‑1 (MQ=255)                                                         tttGGCGAGCGTTCTTATCTTGCCGATCAAAAAAAAGCCCTGGAATTTGCCAGCGGTTTTTTTGTTGGTTTGATTTAAGCGGTAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTcaca                                                                                <  1:767305/139‑1 (MQ=255)                                                         tttGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATGGCCAGCCGGTTTATTGATGGTATGCATTAAGCCGTAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTcaca                                                                                <  2:1630950/139‑1 (MQ=255)                                                         tttGGCGAGCGTTATTATATTGCCTATCCACAAAAAGCCCTGGAAATTGCCAGCCGGTTTTTTGATGGTATGCATGAAGCCGTAATGAACACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTcaca                                                                                <  1:1671887/139‑1 (MQ=255)                                                         ttgggCGTGCTTTTTTATCTGGCCGATCAAAAAAAAGCCTTGGCTATTGCCAGCCGGTTTTTTGTTGTTTTGCTTGAAGCGGCAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTcaca                                                                                <  1:767397/137‑1 (MQ=255)                                                         ttgggCGTGCGTTCTTATCATGCCTACCCAAAAAATGCCCTGGAATTTGCCCGCGGTTTTTTTGTTGGTATGAATGACGCGGTAATCAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTcaca                                                                                <  1:394669/137‑1 (MQ=255)                                                         tgtGGCGAGTTTTTTTATATTGCCTATCCACAAAATGCCGTGGAATTTGCCAGCGGTTTTTTTGTTGTTATGAATGACGCCGTAATTAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTcaca                                                                                <  1:71641/138‑1 (MQ=255)                                                         aTTGGCGCGCTTTATAATAATGCCGAACCACAAAAAGCCCTGGAATTTGCCAGCCGGTTTATTTTTGGTATGAATGAAGCCGCAATGAACACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTcaca                                                                                <  1:497893/140‑1 (MQ=255)                                                         aTTGGCGAGCGTTATTATATTGCCTATCAACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGTAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTcaca                                                                                <  2:847576/140‑1 (MQ=255)                                                         aTTGGCGAGCGTTATTAACATGCCGTTCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTTTTGATGGTATGAATGACGCCGTAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCATACTcaca                                                                                <  2:598435/140‑1 (MQ=255)                                                          ttGGCGTGCGTTCTTATCATGCCGATCCAAAAAAAGCCCTGGCAATTGCCAGCCGGTTTTTTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTcacac                                                                               <  1:888864/140‑1 (MQ=255)                                                           tGGGGAGCGTTCTTATCTTGCCTAACCACAAAAAGCCCTGTAATTTGCATGCGGTTTTATTGATTTTTTCAATGACGCCGTAATCAACACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTcacaca                                                                              <  1:128412/140‑1 (MQ=255)                                                             cctaGCTTTCTTAACATGCCTAACCAAAAAAAGCCCTGCAAATTGCCACCCGTTTTATTGATGGTATGCATGAACCCGCAATCAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACaaa                                                                            <  2:353533/137‑1 (MQ=255)                                                                              gCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATcc                                                           >  2:692296/1‑140 (MQ=255)                                                                               ccGATCCACAAATAGCCCTGGCAATTGCCAGCGGGTTTTTTGATGGTATGCATGAAGCCGGATTGATAACGACCGGGAAACACTTCCCAGGACACGGTGCTGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCa                                                          <  2:868494/140‑1 (MQ=255)                                                                               ccGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCa                                                          >  1:40115/1‑140 (MQ=255)                                                                               ccGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCa                                                          >  2:1437277/1‑140 (MQ=255)                                                                               ccGATCCAAAAAAACCCATGGCAATTGCCAGCCGTTTTATTGTGGGTATGCATTAAGCCGCAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCa                                                          <  2:871655/140‑1 (MQ=255)                                                                               ccGACCCACAAAAAGCCCTGGCAATTGCCAGCGGTTTTATTGATGGTATGCATTAAGCCGTAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCa                                                          <  2:322187/140‑1 (MQ=255)                                                                                  aTCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGt                                                       >  1:401134/1‑140 (MQ=255)                                                                                      aaaaaacGCCCTGGATATTGCCAGCCGGTTTTTTTATGGTATGAATTAAGCCGTATTGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCcac                                                   <  2:266902/138‑1 (MQ=255)                                                                                      aaaaaaaGCCCTGGAAATTGCCAGCCGGTTTATTGATGGTATGAATGAAGCCGTAATCAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCcac                                                   <  1:663953/138‑1 (MQ=255)                                                                                          aaaGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGc                                               >  2:810947/1‑140 (MQ=255)                                                                                                        tGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGTAACACCGTGCGATCCACCTCCACTAGCGGAGATTCGCGCTa                                 >  2:953016/1‑140 (MQ=255)                                                                                                        tGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTa                                 >  1:1488203/1‑140 (MQ=255)                                                                                                         gCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTaa                                >  2:1736105/1‑140 (MQ=255)                                                                                                          ccAGCGGGTTTTTTTATGGTATGCATGACGCGGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTaaa                               <  1:817798/140‑1 (MQ=255)                                                                                                             gCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGat                            >  1:168378/1‑140 (MQ=255)                                                                                                             gCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGat                            >  2:75581/1‑140 (MQ=255)                                                                                                             gCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGACCACAAGCGGAGATTCGCGCTAAAGat                            >  2:586681/1‑140 (MQ=255)                                                                                                                 ttttATTGATGGTATGCTTGAAGCCGTAATTAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGt                        <  2:1041974/139‑1 (MQ=255)                                                                                                                 gTTTTTTGATGTTTTGCTTGTAGCCGTAATTTAAACGACCGGTAAACACTTCCCAGGACACGTTGCAGTAACGGGAGACTCACACAAAGAAACACCGTGCGATCCTCGTCCACAAGCGGAGATTCGCGCTAAAGATATGt                        <  2:1607894/140‑1 (MQ=255)                                                                                                                 gTTTATTGATGGTATGCATGAAGCCGGAATGAACACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGt                        <  2:1599756/140‑1 (MQ=255)                                                                                                                   ttATTGTTGGTTTGCATGACGCCGTAATTAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCg                      <  1:1192666/140‑1 (MQ=255)                                                                                                                        gttGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCtt                 <  2:967726/138‑1 (MQ=255)                                                                                                                        gttGGTATGAATGAAGCCGTATTTAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCtt                 <  2:967718/138‑1 (MQ=255)                                                                                                                        gATGTTTTGCATTAAGCCGTAATTAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCtt                 <  2:967767/140‑1 (MQ=255)                                                                                                                        gATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCtt                 >  1:1039132/1‑140 (MQ=255)                                                                                                                          tGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCa               <  2:494221/140‑1 (MQ=255)                                                                                                                          tGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCa               <  2:1203378/140‑1 (MQ=255)                                                                                                                           ggTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAg              >  1:1042684/1‑140 (MQ=255)                                                                                                                            ttATGCATTAAGCGGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTATTCAGt             <  2:594977/139‑1 (MQ=255)                                                                                                                            gTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGt             >  1:1570322/1‑140 (MQ=255)                                                                                                                               tGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTcc          >  1:83054/1‑140 (MQ=255)                                                                                                                               tGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTcc          >  1:575191/1‑140 (MQ=255)                                                                                                                               tGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTcc          >  1:574856/1‑140 (MQ=255)                                                                                                                                     aaGCCGGATTGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCTTAATc    <  1:816876/140‑1 (MQ=255)                                                                                                                                      aGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCTTAATcc   >  1:1756721/1‑140 (MQ=255)                                                                                                                                       gCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGTTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTAGGTCTTCATTTCCTTAATCcg  >  1:262059/1‑140 (MQ=255)                                                                                                                                       gCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCTTAATCcg  >  1:262060/1‑140 (MQ=255)                                                                                                                                       gCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCTTAATCcg  >  1:259903/1‑140 (MQ=255)                                                                                                                                           |                                                                                                                                        TGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCTTAATCCG  >  NC_000913/1164426‑1164699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑