| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,462,880 | 2 | . | C | 32.6% | 69.4 / 76.1 | 46 | intergenic (+234/‑132) | fadL/yfdF | long‑chain fatty acid outer membrane transporter/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base . (10/21); new base C (2/13); total (12/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.29e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAA > NC_000913/2462743‑2463009 | ttGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑cg > 2:1165998/1‑139 (MQ=255)ttGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑cc > 1:1315409/1‑140 (MQ=255) tGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc < 1:5976/140‑1 (MQ=255) tGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc < 1:967357/140‑1 (MQ=255) gCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTTTCCACAGACAAACCTGAAGGTTATGGCTTATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCTTTTCCA‑GGAT‑A‑‑CT‑‑ccc‑c < 1:800631/140‑1 (MQ=255) gCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGGGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑c < 2:896494/140‑1 (MQ=255) gCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑c < 1:98685/140‑1 (MQ=255) cAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATCAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑cc < 2:1249022/140‑1 (MQ=255) cAAACAGCCTGTTGGCAGCTTGCCCATACAAAACAATAAGCGGTATCCACAGACAAACCTGAAGGGAAACGCATAATTACAGGCGTACTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑cc < 2:571029/140‑1 (MQ=255) cAAACAGCCGGTTGGCAGCTTGCCCTTTCAAATCCATAAGCGGTATCCACAGCCAAACCTGACGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCCAAGAGTTTACTTTTCTGCATTTCCT‑GGAT‑A‑‑CT‑‑ccc‑cc < 2:1100955/140‑1 (MQ=255) aaaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑ccc < 2:687582/140‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCTGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑cccc < 1:765127/140‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑cccc < 2:214985/140‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑cccc < 2:1020973/140‑1 (MQ=255) aCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑ccccc < 2:1740679/140‑1 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑ccctcc < 2:424517/140‑1 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑cccccc < 1:1032424/140‑1 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑cccccc < 1:1602412/140‑1 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑cccccc < 1:1034078/140‑1 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑cccccc < 1:1034020/140‑1 (MQ=255) agacTGTTGGGTGCTTGCCATTTCAAATCAATAAGCGGGATGCTCAGTGATACCTGAATGTAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAATAGTTTACTTTTCTGCATTTCCA‑GGAT‑T‑‑CT‑‑acc‑cccaccg < 2:619116/137‑2 (MQ=255) gCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑cccccccc < 2:1348670/140‑3 (MQ=255) gCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑cccccccc < 2:1383495/140‑3 (MQ=255) gCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑cccccccc < 2:1383645/140‑3 (MQ=255) gCCTGGTGGAAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑cccccccc < 2:1027568/140‑3 (MQ=255) ccTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTgg < 1:850941/140‑1 (MQ=255) cTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑ccc‑ccccccctgg < 2:196918/140‑5 (MQ=255) cagcacgCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATtgtg < 1:1719791/134‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATtgtg < 2:1005397/140‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑‑CC‑CCCCCCTGGCTATTGTgc > 2:986920/1‑140 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTATtgtg < 1:190105/140‑1 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTgcg > 2:880526/1‑140 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CC‑‑CCC‑CCCCCCTGGCTATTGTgcg < 1:1271386/140‑1 (MQ=255) cGGTATCCTCAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTGTCTGCATTTCCA‑GGAT‑A‑‑CTC‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 1:1725604/140‑1 (MQ=255) ggTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 1:331333/140‑1 (MQ=255) aTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGtt < 1:305103/140‑1 (MQ=255) aTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGtt > 1:106393/1‑140 (MQ=255) aTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGtt < 2:1753629/140‑1 (MQ=255) tCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CTC‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGtt < 1:1205250/140‑1 (MQ=255) ccTGAAGGGAAAGGCATATTTTCTGGCGTTATGCTCGTCCTTCTAAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATg < 1:1747904/140‑1 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg > 1:1217409/1‑140 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 1:1581387/140‑1 (MQ=255) tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGATTTTAATTTTCTGCATTTCCA‑GTAT‑A‑‑CTCCCCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 2:755516/140‑1 (MQ=255) tGAAGGGAAAGGCAAATTTTCAGGCGTTCTGCTCGTCCTTCTAAAACAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAAATAAAGATAGGTTCTAAATAAATGAg < 1:1008579/140‑1 (MQ=255) aaaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAG‑A‑‑CTC‑CCC‑CCCCCCGGGCTATTGGGCGCGCATACGCGCAAATGAAAGAGACGTACGAAATAACTGAGCGtttttg > 2:1316981/1‑139 (MQ=255) aGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAt > 1:1225320/1‑140 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAACGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 2:757553/140‑1 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 2:964569/140‑1 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 2:964835/140‑1 (MQ=255) atTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 1:157304/140‑1 (MQ=255) atTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 1:1428689/140‑1 (MQ=255) tttCATGCGTTCTGCAAGTCCTTAACAAACTATTTAATTTTAATCATTTACACGTATCT‑‑CC‑‑CCC‑CCCCCCTGGATATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 1:804262/140‑1 (MQ=255) tttCAGGCGTTCTGCTCGTCCTTCTCAAAGTGTTAACTTTTCTGCATTTCAA‑GGAT‑AATCC‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 2:1083451/140‑1 (MQ=255) tttCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 1:1590717/140‑1 (MQ=255) aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAt > 2:1339322/1‑140 (MQ=255) aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAt > 1:1603242/1‑140 (MQ=255) cGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAtt < 1:1672785/140‑1 (MQ=255) gTTCTGCTCGTCCTTCTCAAAGATTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTATTGTGCGCTCATACTCTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTa < 2:820535/140‑1 (MQ=255) tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTa < 2:421552/140‑1 (MQ=255) tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTa < 1:880526/140‑1 (MQ=255) cTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAat < 2:1426115/140‑1 (MQ=255) ccTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATAtt > 1:1420359/1‑140 (MQ=255) tctcAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTGTGGTGGGGTGATACACTCTTTGTGTAGTTGGGGTGTGATTTAGTGAGGGTTTTTTGTTGGTCGATTTGATTATGGAATATATAttt > 2:2763/1‑140 (MQ=255) gagTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CTC‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACaaa < 1:1643284/140‑1 (MQ=255) agTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACaaa < 2:438968/140‑1 (MQ=255) ttAGTTTTCTGCTTTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCGCGTGGCTATTGTGCGCTAATACACTCAAATTAAAGATAGGTTCTATATAAATGAGCGTTTTTGGTTAGTCTATTTCATTTTGTAATATATATTTGTAACAaatcaat < 2:566522/140‑1 (MQ=255) tCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCCGCCCCCCGGGGTAGGGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGGTTTTTTATAGTCTATTTCATTAGGTAATATATATTTTTAAAAAATCAATCAAAAt > 2:1165148/1‑140 (MQ=255) tCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATg < 1:87690/140‑1 (MQ=255) tGCATTTCCA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTCTTGGGCGCTCGTGCCCGCATTTGGATGATCGGGTCTGAATAAATGTGCGTTTTTTGAGAGTCTATTGCGTTAGGTAATATTTATTTGTAACAAATCAAGCACAATg > 2:499973/1‑140 (MQ=255) cA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATaaaa < 2:682566/140‑1 (MQ=255) cA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATaaaa < 2:682157/140‑1 (MQ=255) cA‑GGAT‑A‑‑CTCCCCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATaaaa < 2:628452/140‑1 (MQ=255) | TTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCA‑GGAT‑A‑‑CT‑‑CCC‑CCCCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAA > NC_000913/2462743‑2463009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |