BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,859,354	0	T	C	51.0%	41.2 / inf	344	N255D (AAC→GAC)	yidK	putative transporter
Reads supporting (aligned to +/- strand): ref base T (106/62); new base C (87/88); total (193/151)
Fisher's exact test for biased strand distribution p-value = 1.65e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 352 total aligned reads displayed.

ACCCTGGCAGCACCAGTACCAGCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGCCCATCGCGATTAGG  >  NC_000913/3859216‑3859493

aCCCTGGCAGCACCAGTACCAGCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTc                                                                                                                                            >  2:1384477/1‑140 (MQ=255)

  ccTGGCAGCACCAGTACCAGCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCAc                                                                                                                                          <  2:892251/140‑1 (MQ=255)

  ccTCGCAGCACCAGTACCAGCGGGTCGAGCAATTACAGCACCGCCGTTAACACCGCCCCCTTATGCCCTTCCGCCAGGCATATTGACGCCAGCGAGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCAc                                                                                                                                          <  2:1454569/140‑1 (MQ=255)

   cTGGCAGCACCAGTACCAGCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCAcc                                                                                                                                         >  1:1064484/1‑140 (MQ=255)

   cTGGCAGCACCAGTACCAGCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGAACACCAGTAAAAGGTGTCCAcc                                                                                                                                         >  1:918274/1‑140 (MQ=255)

         gcaCCAGTACCAGCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATc                                                                                                                                   >  1:497324/1‑140 (MQ=255)

          caCCAGTACCAGCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCa                                                                                                                                  <  2:13065/140‑1 (MQ=255)

           aCCAGTACCAGCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCaa                                                                                                                                 >  1:24302/1‑140 (MQ=255)

            ccAGTACCAGCGGGTCTAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCaaa                                                                                                                                <  1:1025581/140‑1 (MQ=255)

            ccAGTACCAGCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCaaa                                                                                                                                <  1:1534974/140‑1 (MQ=255)

                    aGCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTaaa                                                                                                                        >  2:494680/1‑140 (MQ=255)

                     gCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAAt                                                                                                                       >  2:467038/1‑140 (MQ=255)

                     gCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAAt                                                                                                                       >  2:1324616/1‑140 (MQ=255)

                     gCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAAt                                                                                                                       >  1:128957/1‑140 (MQ=255)

                     gCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGAGTCCACCAGAATCAAACCGGTAAAt                                                                                                                       >  1:1594513/1‑140 (MQ=255)

                          tCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAATAGGTGTCCACCAGAATCAAACCGGTAAATGCcgc                                                                                                                  >  1:965776/1‑140 (MQ=255)

                          tCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCcgc                                                                                                                  >  1:561147/1‑140 (MQ=255)

                          tCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCcgc                                                                                                                  >  1:182041/1‑140 (MQ=255)

                              gCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCATTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCa                                                                                                              <  1:1426543/140‑1 (MQ=255)

                                   ttCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCgg                                                                                                         >  2:57841/1‑140 (MQ=255)

                                   ttCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGAACACCAGTAAAAGGTGTTCACCAGAAACAAACCGGTAAATGCCGCGCCAATCgg                                                                                                         >  1:1565759/1‑140 (MQ=255)

                                    tCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGc                                                                                                        <  2:224333/140‑1 (MQ=255)

                                    tCAGCACCGCCGATAACAGCGCCCCCATTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGc                                                                                                        <  2:56701/140‑1 (MQ=255)

                                     cAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCa                                                                                                       <  2:1269600/140‑1 (MQ=255)

                                     cAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCATTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCa                                                                                                       <  2:102401/140‑1 (MQ=255)

                                          ccgccgTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGa                                                                                                  >  2:1706285/1‑140 (MQ=255)

                                           cgccgTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGAt                                                                                                 >  1:108375/1‑140 (MQ=255)

                                                  aaCAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGAtcggtcgg                                                                                          >  1:199981/1‑140 (MQ=255)

                                                       cgcCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCAc                                                                                     >  1:44802/1‑140 (MQ=255)

                                                       cgcCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCAc                                                                                     >  1:1189171/1‑140 (MQ=255)

                                                       cgcCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCAc                                                                                     >  1:148201/1‑140 (MQ=255)

                                                       cgcCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCAc                                                                                     >  1:947567/1‑140 (MQ=255)

                                                       cgcCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCAc                                                                                     >  1:1436336/1‑140 (MQ=255)

                                                        gcCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCAcc                                                                                    >  1:732632/1‑140 (MQ=255)

                                                              ttttGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGa                                                                              >  2:1348023/1‑140 (MQ=255)

                                                                    ccTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTaa                                                                        >  2:585934/1‑140 (MQ=255)

                                                                      ttCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGTCAAGGGATCGGTCGGGCAACCGATTGAGTTTAAtt                                                                      >  2:983287/1‑140 (MQ=255)

                                                                        ccGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTtc                                                                    >  2:361893/1‑140 (MQ=255)

                                                                        acGCCAGGCTATTTGACTCCAGCGAGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCTTTACGGTAAATTCCGCGCCAATCGGCTAGGGATCGGTCGGGCCACCGATTGAGTTTAATTtc                                                                    <  2:1667318/139‑1 (MQ=255)

                                                                           ccAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCg                                                                 <  2:313801/140‑1 (MQ=255)

                                                                             aGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGc                                                               <  2:770714/140‑1 (MQ=255)

                                                                                  ttttGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTATAAGGTGTACACCTGAATCAAACCGGTACATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGaa                                                          <  2:1286110/140‑1 (MQ=255)

                                                                                  ttttGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGaa                                                          >  2:113768/1‑140 (MQ=255)

                                                                                  ttttGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGaa                                                          <  2:343929/140‑1 (MQ=255)

                                                                                  ttttGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGaa                                                          <  2:1122654/140‑1 (MQ=255)

                                                                                  ttttGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGaa                                                          <  1:779488/140‑1 (MQ=255)

                                                                                    ttGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACg                                                        >  2:1247105/1‑140 (MQ=255)

                                                                                       aCGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACggtg                                                     <  1:1367009/140‑1 (MQ=255)

                                                                                       aCGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACggtg                                                     <  2:428571/140‑1 (MQ=255)

                                                                                          ccAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGgtggtg                                                  >  1:848364/1‑140 (MQ=255)

                                                                                          ccAGCGTGCGATGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAAACGGCAAGGGATCGGTCGGGCCACCGATTGAGATAAATATCTCGGCGTGAACGgtggtg                                                  >  2:1437112/1‑140 (MQ=255)

                                                                                            aGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAg                                                <  1:1252756/140‑1 (MQ=255)

                                                                                            aGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAg                                                <  2:1185812/140‑1 (MQ=255)

                                                                                              cgtgcgtTGCACGATGCCCTGATTTGTACACCAGTATCAGGTTTTCACCAGAATCATACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACAGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGtt                                              <  2:618608/140‑1 (MQ=255)

                                                                                                     tGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAAt                                       >  2:411028/1‑140 (MQ=255)

                                                                                                       cACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGc                                     >  1:1179340/1‑140 (MQ=255)

                                                                                                        aCGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGcc                                    <  1:1457023/140‑1 (MQ=255)

                                                                                                        aCGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGcc                                    <  2:1596508/140‑1 (MQ=255)

                                                                                                        aCGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGcc                                    <  1:1016199/140‑1 (MQ=255)

                                                                                                        aCGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGcc                                    <  2:1104704/140‑1 (MQ=255)

                                                                                                        aCGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGcc                                    <  2:276253/140‑1 (MQ=255)

                                                                                                         cGATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGccc                                   <  1:794690/140‑1 (MQ=255)

                                                                                                          gATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGATGCTCAATGCCCt                                  >  1:365464/1‑140 (MQ=255)

                                                                                                          gATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGT‑GTGAGTTGCTCAATGCCCTg                                 >  1:276981/1‑140 (MQ=255)

                                                                                                          gATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCt                                  >  1:386988/1‑140 (MQ=255)

                                                                                                          gATGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCt                                  >  2:1642348/1‑140 (MQ=255)

                                                                                                           aTGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGAGTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTg                                 >  1:887901/1‑140 (MQ=255)

                                                                                                            tGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGc                                >  1:411552/1‑140 (MQ=255)

                                                                                                            tGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGc                                >  1:319361/1‑140 (MQ=255)

                                                                                                            tGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGGCGGGCCACCGATTGAGTTTAATAACTCGGCGTGAACGGTGGTGAGTTGCACAAAGCACTGc                                >  2:878996/1‑140 (MQ=255)

                                                                                                            tGCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGc                                >  1:379538/1‑140 (MQ=255)

                                                                                                             gCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCa                               <  1:630108/140‑1 (MQ=255)

                                                                                                             gCCCTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAACCCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCa                               <  2:351680/140‑1 (MQ=255)

                                                                                                              cccTGATTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCAt                              <  1:1523911/140‑1 (MQ=255)

                                                                                                                  gATGTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAACTGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATGTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAg                          <  2:1767801/140‑1 (MQ=255)

                                                                                                                   aTTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGc                         <  1:269739/140‑1 (MQ=255)

                                                                                                                   aTTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGc                         <  1:1488613/140‑1 (MQ=255)

                                                                                                                   aTTTGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGc                         >  2:911826/1‑140 (MQ=255)

                                                                                                                     ttGTACACCAGTAACAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTg                       <  1:1271499/140‑1 (MQ=255)

                                                                                                                      tGTACACCAGTTAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTTATTTCTCGGCGTGAACGGTGGTGTGTTGCTCAATGCCCTGCATAAAGCTGc                      >  2:735673/1‑140 (MQ=255)

                                                                                                                      tGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCTGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGACCGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGc                      >  2:8243/1‑140 (MQ=255)

                                                                                                                      tGTACACCAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGc                      >  1:474678/1‑140 (MQ=255)

                                                                                                                        tACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGccc                    >  2:1077303/1‑140 (MQ=255)

                                                                                                                        tACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGccc                    >  1:1690738/1‑140 (MQ=255)

                                                                                                                        tACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGccc                    >  1:754852/1‑140 (MQ=255)

                                                                                                                             ctgttaaaGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTATAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGcc               >  2:809171/6‑140 (MQ=255)

                                                                                                                             cAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGcc               >  1:177026/1‑140 (MQ=255)

                                                                                                                             cAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGACCGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGcc               >  1:1730212/1‑140 (MQ=255)

                                                                                                                             cAGTAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGcc               >  1:1176452/1‑140 (MQ=255)

                                                                                                                                tAAAAGGTGTCCACCAGAATCAAACCGGTAAATTCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTTCCCAt            >  1:619693/1‑140 (MQ=255)

                                                                                                                                tAAAAGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGCCCAt            >  1:1035442/1‑140 (MQ=255)

                                                                                                                                  aaaGGTGTCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGCCCATcg          >  1:113981/1‑140 (MQ=255)

                                                                                                                                     ggTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGCCCATCGCGa       >  1:663696/1‑140 (MQ=255)

                                                                                                                                       tgtTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGCCCATCGCGAtt     >  1:529077/1‑140 (MQ=255)

                                                                                                                                       tgtTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGCCCATCGCGAtt     >  1:1658450/1‑140 (MQ=255)

                                                                                                                                       tgtCCACCAGAATCAAACCGGTACATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCATGCATAAAGCTGCCCTTGCCCATCGCGAtt     <  2:53475/140‑1 (MQ=255)

                                                                                                                                       tgtCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGCCCATCGCGAtt     <  2:466575/140‑1 (MQ=255)

                                                                                                                                       tgtCCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTACTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGCCCATCGCGAtt     <  2:693397/140‑1 (MQ=255)

                                                                                                                                         ttCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGCCCATCGCGATTAg   >  1:1616861/1‑140 (MQ=255)

                                                                                                                                         ttCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGCCAATCGCGATTAg   >  1:334041/1‑140 (MQ=255)

ACCCTGGCAGCACCAGTACCAGCGGGTCGAGCATTTTCAGCACCGCCGTTAACAGCGCCCCCTTTTGCCCTTCCGCCAGGCTTTTTGACGCCAGCGTGCGTTGCACGATGCCCTGATTTGTACACCAGTAAAAGGTGTTCACCAGAATCAAACCGGTAAATGCCGCGCCAATCGGCAAGGGATCGGTCGGGCCACCGATTGAGTTTAATTTCTCGGCGTGAACGGTGGTGAGTTGCTCAATGCCCTGCATAAAGCTGCCCTTGCCCATCGCGATTAGG  >  NC_000913/3859216‑3859493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`