| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,049,313 | G→A | S7L (TCG→TTG) | gfcB ← | O‑antigen capsule production lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,049,313 | 0 | G | A | 96.3% | 243.6 / 1.2 | 83 | S7L (TCG→TTG) | gfcB | O‑antigen capsule production lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (1/2); new base A (40/38); total (41/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.91e-01 | |||||||||||
TAGTGGAATAAGGCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCGATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAG > NC_000913/1049179‑1049449 | tAGTGGAATAAGGCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATaaa > 2:525059/1‑140 (MQ=255)tAGTGGAATAAGGCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATaaa > 2:525057/1‑140 (MQ=255)tAGTGGAATAAGGCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATaaa > 2:1486598/1‑140 (MQ=255)tAGTGGAATAAGGCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATaaa > 1:1361175/1‑140 (MQ=255) tGGAATAAGGCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATa > 1:1483587/1‑140 (MQ=255) ggAATAAGGCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCaataaaataa < 1:805886/140‑1 (MQ=255) ggAATAAGGCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCaataaaataa < 1:805813/140‑1 (MQ=255) ggAATAAGGCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCGATAAAATaa < 2:1484507/140‑1 (MQ=255) aaTAAGGCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAaga > 2:1557272/1‑140 (MQ=255) ggCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCTTACATCCCGCAAGAAATAGTGCGAAAATCAGTAAAATAAGAGGgcg > 2:1541039/1‑140 (MQ=255) ggCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGgcg < 1:525057/140‑1 (MQ=255) ggCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGgcg < 1:525059/140‑1 (MQ=255) ggCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGgcg > 1:1521102/1‑140 (MQ=255) ggCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGgcg > 2:1113148/1‑140 (MQ=255) gCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGgcgc < 1:295951/140‑1 (MQ=255) cGCCTGGATCTGCTGATCCTCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATTTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAATATAAGAGGGCGCAcat > 2:1262111/1‑138 (MQ=255) cGCCTGGATCTGCTGATCCGCTACGGTGATTTCCTGATTCTCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCACGAAATAGTGCGAATATCAATAAAATAAGAGGGCGCACCt > 2:1264491/1‑140 (MQ=255) cGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCt > 2:1245717/1‑140 (MQ=255) tGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTaa < 1:1299109/140‑1 (MQ=255) gctgATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAATTCAATAAAATAAGAGGGCGCACCTTTAATCCTTGa > 1:402473/1‑140 (MQ=255) gctgATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGa < 1:1365572/140‑1 (MQ=255) gctgATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGa > 2:1263760/1‑140 (MQ=255) gctgATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGa > 2:289979/1‑140 (MQ=255) gctgATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGa > 2:760662/1‑140 (MQ=255) ctgATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGaa > 1:1003978/1‑140 (MQ=255) ctgATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGaa > 2:335086/1‑140 (MQ=255) ctgATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCATTGaa > 2:1013913/1‑140 (MQ=255) gTGATAACCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCCTACATTGCTGGCTGTGCGTACAACCCGCAAGAAATAGTGCGAAAATCAAGAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTACTTaaaa < 2:247552/140‑1 (MQ=255) gTGATAACCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTaaaa > 2:642812/1‑140 (MQ=255) gATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATTCTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTaaaaaa < 2:1412007/140‑1 (MQ=255) gATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTaaaaaa < 2:1360167/140‑1 (MQ=255) gATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTaaaaaa < 2:1412670/140‑1 (MQ=255) atCCTGATTATCGAAAAGGCAGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATg < 2:1088135/140‑1 (MQ=255) ccTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCa < 2:342840/140‑1 (MQ=255) tgcataccGAAAAGGCTGGCGCGAACAGTATCGCCCAAACTTGGCTGGCTGTGCGAACATCCCGCAAGAAATAGTGCGAAAAACCATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCaaa < 2:1726826/133‑1 (MQ=255) tGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCGATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCaaa < 1:844660/140‑1 (MQ=255) tGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCaaa < 2:345012/140‑1 (MQ=255) tGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCaaa < 2:704634/140‑1 (MQ=255) tGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCaaa < 2:1159471/140‑1 (MQ=255) agATTATCTAAAAGTCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCaaa < 2:1701855/139‑1 (MQ=255) gATTATCGTAAAGGCTGGAGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAATATATAGTGCGAAAATCAATAAAATAAGAGGGCGCTCCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAAt < 2:729836/140‑1 (MQ=255) gATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAAt < 1:1188235/140‑1 (MQ=255) gATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAAt < 2:731326/140‑1 (MQ=255) gATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAAt < 2:731174/140‑1 (MQ=255) aTTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGATAATGAATAAAATAAGTGGGCGCACCTTTAATCCTTGTAAGGTTAATTAAAAATTTGCAAAtc > 2:1424896/1‑140 (MQ=255) aTTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAAtc > 1:1431071/1‑140 (MQ=255) aTTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAAtc > 2:667907/1‑140 (MQ=255) aTTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAAtc > 2:942642/1‑140 (MQ=255) aTTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAAtc > 1:301608/1‑140 (MQ=255) aTTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAAtc > 1:336729/1‑140 (MQ=255) cGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTaa > 2:743116/1‑140 (MQ=255) aGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAACCCCAAAGCTCAAAAGccc > 1:795808/1‑140 (MQ=255) cTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGt < 2:162318/140‑1 (MQ=255) tGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAATGCCCGGTa > 1:816426/1‑140 (MQ=255) tGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTa > 1:1037416/1‑140 (MQ=255) aaTGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAATGGTTAATTAAAATAATGCAAATCTCTAAAGCCCGGTACGAATATc > 2:1603863/1‑140 (MQ=255) tATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCaa > 2:655824/1‑140 (MQ=255) aCCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTACTCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCggg < 2:1658381/140‑1 (MQ=255) aCCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCggg > 2:948807/1‑140 (MQ=255) aCCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTATAAAGCCCGGTACGAATATCGCAACCggg < 2:1404812/140‑1 (MQ=255) cATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTa < 1:1662924/140‑1 (MQ=255) aTACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTAt > 1:1080188/1‑140 (MQ=255) aCTTAGCTGGCTGTGCGTACAACCCTCAAGAAATAGTGCGAAAATCAATAAAAAAAGAGGGCGCACCTTTAATCCTTGAAAGGTTATTAAAAAATCTGCAAATCTGTAAAGCCCGGTACGAATCTCGCAACCGGGTATCa > 1:1627397/1‑140 (MQ=255) cTTTGCGGGCGGTGCGTACATCCCGCAAGAAAGAGTGCGAACACCAATAAAATAAGAGGGCGCACCTTTAATCCTTGACAGGTTAATTAAAAAAATGCCCATCTCTAAAGCCCGGTACGAATATAGCAAGCGGGTATCAt < 2:71451/140‑1 (MQ=255) tGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCACCCGGGTATCagata > 2:257054/1‑136 (MQ=255) gctgTGCGTACATCCCGCAAGAAATAGTGCGAAAATCGATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGATAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACttt > 1:866634/1‑140 (MQ=255) tACATCCCGCAAGAAATTGTGCGATAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCTAATCTCTAATGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGa < 2:957513/140‑1 (MQ=255) tACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGa < 1:504236/140‑1 (MQ=255) tACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGa < 1:1191343/140‑1 (MQ=255) tACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGa < 1:891209/140‑1 (MQ=255) tACATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGa < 1:891647/140‑1 (MQ=255) cATCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGAcg > 2:1349678/1‑140 (MQ=255) tCCCGCAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGAcgcg > 1:1254828/1‑140 (MQ=255) cAAGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGAAACCGGGTATCATTTAACTTTAATTTCGACGCGTTaaa > 2:595541/1‑140 (MQ=255) aaGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTTAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAg < 1:1245717/140‑1 (MQ=255) aaGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAg < 1:308839/140‑1 (MQ=255) aaGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAg < 1:1557272/140‑1 (MQ=255) aaGAAATAGTGCGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAg < 2:331784/140‑1 (MQ=255) aTAGTGCGAAAATCTATAATATAAGAGGGCGCACCTTTTATCCTTGAAAGGTTAATTATAAAAATGCAAATCTCTAATGCCCGGTACGAATATAGCAACCGGGTATCATTTAACTTTATTTTCGACGCGTTTAAGCAGTa < 2:1711169/140‑1 (MQ=255) aTAGTGCGAAAATCAATAAAATAAGAGCGCGCACCTTAAATCATTGAAAGGTTAATTAAAAAAATGCAAAACAATAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGATTTAAAGCAGtt > 2:523030/1‑139 (MQ=255) cGAAAATCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCg < 2:777419/140‑1 (MQ=255) cGAAAATCAATAAAATAAGACCCCCCACCTTTAATCCATGAAAGGATAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCg < 1:1352431/140‑1 (MQ=255) aaaTCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCgtgt < 1:1263760/140‑1 (MQ=255) aTCAATAAATTAAGTGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGAAAATCACTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTTACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAg < 2:1373972/140‑1 (MQ=255) aTCAATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAg < 2:1374449/140‑1 (MQ=255) | TAGTGGAATAAGGCAACGCCTGGATCTGCTGATCCGCTACGGTGATATCCTGATTATCGAAAAGGCTGGCGCGAAATGTATCGACCATACTTTGCTGGCTGTGCGTACATCCCGCAAGAAATAGTGCGAAAATCGATAAAATAAGAGGGCGCACCTTTAATCCTTGAAAGGTTAATTAAAAAAATGCAAATCTCTAAAGCCCGGTACGAATATCGCAACCGGGTATCATTTAACTTTAATTTCGACGCGTTAAAGCAGTATTAGCGTGTAG > NC_000913/1049179‑1049449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |