| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4090007 | 69 (1.010) | 3 (0.050) | 3/268 | NT | 4.2% | coding (919/1071 nt) | frvX | putative peptidase |
| ? | NC_000913 | = 4090040 | 70 (1.050) | coding (886/1071 nt) | frvX | putative peptidase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TAATCCACCTGACGGAACTGGCTAAACGCGTTGACTTTCTCCGCAGTTAAGGTCGTCAGAAAACCCCGTATCAGCGTGAGCAGAGCTTCGTAATCGGCTTTTGAAATCATACCGCTGTTGGCGTGCAGATAACGAGTTGGCAGACACAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4089856‑4090007‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcTACAACGTGATGGGCGGCGGGCGTCCGGTTGTCGCGCTGTGTCTGCCAACTCGTTATCTGCACGCCAACAGCGGTATGATTTCAAAAGCCGATTACGAAGCTCTGCTCACGCTGATACGGGGTTTTCTGACGACCTTAACTGCGGAG < NC_000913/4090040‑4089894 TAATCCACCTGACGGAACTGGCTAAACGCGTTGACTTTCTCCGCAGTTAAGGTCGTCAGAAAACCCCGTATCAGCGTGAGCAGAGCTTCGTAATCGGCTTTTGAAATCATACCGCTGTTGGCGTGCTGATAACGAGTTGGCAGACACAG > 1:291033/1‑149 TCCACCTGACGGAACTGGCTAAACGCGTTGACTTTCTCCGCAGTTAAGGTCGTCAGAAAACCCCGTATCAGCGTGAGCAGAGCTTCGTAATCGGCTTTTGAAATCATACCGCTGTTGGCGTGCAGATAACGAGTTGGCAGACACAGCGC < 2:132585/149‑1 gtgCGCAGGTAAGGTCGTCTGAAAACCACGTATCAGCTTGAGCAGAGATTCGTAATCGGCTTTTGAAATCATACCGCTGTTGGCGTGCAGATAACGAGGTGGCAGACCCAGCGCTACAAGGTGATGGGCGGCGGGCGTCCGGTTGTCGC < 2:883008/146‑1 CAGTTAAGGTCGTCAGAAAACCCCGTATCAGCGTGAGCAGAGCTTCGTAATCGGCTTTTGAAATCATACCGCTGTTGGCGTGCAGATCACGAGTTGGCAGACACAGCGCTACAACGTGATGGGCGGCGGGCGTCCGGTTGTCGCGCTGT < 2:438269/149‑1 TAAGGGCGTCAGAAAACCCCGTATCAGCGTGAGCAGAGCTTCGTAATCGGCTTTTGAAATCATACCGCTGTTGGCGTGCAGATAACGAGTTGGCAGACACAGCGCTACAACGTGATGGGCGGCGGGCGTCCGGTTGTCGCGCTGTGTCT < 1:154865/149‑1 gaGCTACAACGTGATGGGCGGGGGGCGTCCTGTTGTGGCGCTGTGTCTGCCAAATCGTTATCTGCAAGCCATCAGCGGTATGATTTGAAAAGCCGATTACGATGCTCTGCTCACGCTGATACGGGGTTTTCTGACGACCTTAACTGCGG < 2:1113216/147‑1 GCGCTACAACGTGATGGGCGGCGGGCGTCCGGTTGTCGCGCTGTGTCTGCCAACTCGTTATCTGCACGCCAACAGCGGTATGATTTCAAAAGCCGATTACGAAGCTCTGCTCACGCTGATACGGGGTTTTCTGACGACCTTAACTGCGG > 2:900048/1‑149 GCGCTACAACGGGAGGGGCGGCGGGCGTCCTGTTGTCGCGCTGTGTCGGCCAACTCGGTATCTGCTCGCCAACAGCGGTATGATTTCAAAAGCCGATAACGAAGCTCTGCTCACGCTGATACGGGGTTTTCTGACGACCTTAACTGCGG < 2:669079/149‑1 GCTACAACGTGATGGGCGGCGGGCGTCCGGTTGTCGCGCTGTGTCTGCCAACTCGTTATCTGCACGCCAACAGCGGTATGATTTCAAAAGCCGATTAAGAAGCTCTGCTCACGCTGATACGTAGTTATCTGACGACCATAACTGCGGAG > 1:743143/1‑149 TAATCCACCTGACGGAACTGGCTAAACGCGTTGACTTTCTCCGCAGTTAAGGTCGTCAGAAAACCCCGTATCAGCGTGAGCAGAGCTTCGTAATCGGCTTTTGAAATCATACCGCTGTTGGCGTGCAGATAACGAGTTGGCAGACACAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4089856‑4090007‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcTACAACGTGATGGGCGGCGGGCGTCCGGTTGTCGCGCTGTGTCTGCCAACTCGTTATCTGCACGCCAACAGCGGTATGATTTCAAAAGCCGATTACGAAGCTCTGCTCACGCTGATACGGGGTTTTCTGACGACCTTAACTGCGGAG < NC_000913/4090040‑4089894 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |