| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4326878 = | 96 (1.400) | 3 (0.050) | 3/258 | NT | 3.4% | intergenic (‑144/‑257) | yjdM/crfC | zinc‑ribbon family protein/clamp‑binding sister replication fork colocalization protein, dynamin‑related |
| ? | NC_000913 | 4326902 = | 81 (1.270) | intergenic (‑168/‑233) | yjdM/crfC | zinc‑ribbon family protein/clamp‑binding sister replication fork colocalization protein, dynamin‑related | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTTAGTGTGTTGTTTTTTATCAGAATAAATAACGTCTTCTGATACGTTTAAAACGTCAGAAAGATAAAAATATCATGTGAATTAAAAAAAGAACAAGTAGAGCATTAACATTATCTTAAATAATAAATAGAGGCAAAAAGATTATTTTCTTTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4327033‑4326878‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctttttgcCTCTATTTATTATTTAAGATAATGTTAATGCTCTACTTGTTCTTTTTTTAATTCACATGATATTTTTATCTTTCTGACGTTTTAAACGTATCAGAAGACGTTATTTATTCTGATAAAAAACAACACACTAAATATAAAATTATTTC > NC_000913/4326902‑4327047 TTTAGTGTGTTGTTTTTTATCAGAATAAATAACGTCTTCTGATACGTTTAAAACGTCAGAAAGATAAAAATATCATGTGAATTAAAAAAAGAACAAGTAGAGCATTAACATTATCTTAAATAATAAATAGAGGCAAAAAGATTATTTTa > 2:1125251/1‑148TTTAGTGTGTTGTTTTTTATCAGAATAAATAACGTCTTCTGATACGTTTAAAACGTCAGAAAGATAAAAATATCATGTGAATTAAAAAAAGAACAAGTAGAGCATTAACATTATCTTAAATAATAAATAGAGGCAAAAAGATTATTTTC > 2:450166/1‑149 AGTGTGTTGTTTTTTATCAGAATAAATAACGTCTTCTGATACGTTTAAAACGTCAGAAAGATAAAAATATCATGTGAATTAAAAAAAGAACAAGTAGAGCATTAACATAATCTTAAATAATAAATAGAGGCAAAAAGATTATTTTCTTT < 1:398196/149‑1 TGTGTTGTTTTTTATCAGAATAAATAACGTCTTCTGATACTTTTAAAACGTCAGAAAGATAAAAAAATCATGTGAATTAAAAAAAGAACAAGTATAGCATTAACATTATCTTAAATAATAAATAGAGGCAAAAAGATAATTTTCTTTTT < 2:575066/149‑1 TGTGTTGTTTTTTATCAGAATAAATAACGTATTCTGATACGTTTAAAACGTCAGAAATATAAAAATATCATGTGAATTAAAAAAAGAACAAGTAGAGCATTAACATTATCTTAAATAATAAATAGAGGCAAAAAGATTATTTTCTTTTT < 1:763398/149‑1 TGTGTTGTTTTTTATCAGAATAAATAACGGCTTCTGATACGTTTAAAACGTCAGAAAGATAAAAATATCATGTGAATTAAAAAAAGAACAAGTAGAGCATTAACATTATCTTAAATAATAAATAGAGGCAAAAAGATTATTTTCTTTTT < 2:732539/149‑1 tTGTTGTTTTTTATCAGAATAAATAACGTCTTCTGATACGTTTAAAACGTCAGAAAGATAAAAATATCATGTGAATTAAAAAAAGAACAAGT‑GAGCATTAACATTATCTTAAATAATAAATAGAGGCAAAAAGATTATTTTCTTTTTGC < 1:1004848/148‑1 TGTTGTTTTTTATCAGAATAAATAACGTCTTCTGATACGTTTAAAACGTCAGAAAGATAAAAATATCATGTGAATTAAAAAAAGAACAAGTAGAGCATTAACATTATCTTAAATAATAAATAGAGGCAAAAAGATTATTTTCTTTTTGC < 1:1024612/149‑1 TTAAAAAAAGAACAAGTAGAGCATTAACATTATCTTAAATAATAAATAGAGGCAAAAAGTTTAATTTCTTTTTGCCGCTTTTTTTTATTTTAGATAATTTTAATGCTCTACTTGTTTGTTTTTTAATTCACATGATATTTTTATATTTa > 2:917702/1‑148 AAAAGAACAAGTAGAGCATTAACATTATCTTAAATAATAAATAGAGGCAAAAAGATTATTTTCTTTTTGCCTCTATTTATTATTTAAGATAATGTTAATGCTCTACTTGTTCTTTTTTTAATTCACATGATATTTTTATCTTTCTGACG > 2:163232/1‑149 GCAAAAAGATTATTTTCTTTTTGCCTCTATTTATTATTTAAGATAATGTTAATGCTCTACTTGTTCTTTTTTTAATTAACATGATATTTTTATCTTTCTGACGTTTTAAACGTATCAGAAGACGTTATTTATTCTGATAAAAAACAACA > 2:1056134/1‑149 TCTTTTTGCCTCTATTTATTATTTAAGATAATGTTAATGCTCTACTTGTTCTTTTTTTAATTCACATGATATTTTTATCTTTCTGACGTTTTAAACGTATCAGAAGACGTTATTTATTCTGATAAAAAACAACACACTAAATATAAAAT > 2:892041/1‑149 TCTTTTTGCCTCTATTTATTATTTAAGATAATGTTAATGCTCTACTTGTTCTTTTTTTAATTCACATGATATTTTTATCTTTCTGACGTTTTAAACGTATCAGAAGACGTTATTTATTCTGATAAAAAAAAACACACTAAATATAAAAT > 1:577879/1‑149 TTTTGCCTCTATTTATTATTTAAGATAATGTTAATGCTCTACTTGTTCTTTTTTTAATTCACATGATATTTTTATCTTTCTGACGTTTTAAACGTATCAGAAGACGTTATTTATTCTGATAAAAAACAACACACTAAATATAAAATTAT > 1:174405/1‑149 TTTGACTCTATTTATTATTTAAGATAATGTTAATGCTCTACTTGTTCTTTTTTTAATTCACATGATATTTTTATCTTTCTGACGTTTTAAACGTATCAGAAGACGTTATTTATTCTGATAAAAAACAACACACTAAATATAAAATTATT < 1:663035/149‑1 TGCCTCTATTTATTATTTAAGATAATGTTAATGCTCTACTTGTTCTTTTTTTAATTCACATGATATTTTTATCTTTCTGACGTTTTAAACGTATCAGAAGACGTTATTTATTCTGATAAAAAACAACACACTAAATATAAAATTATTTC < 2:230123/149‑1 TTTAGTGTGTTGTTTTTTATCAGAATAAATAACGTCTTCTGATACGTTTAAAACGTCAGAAAGATAAAAATATCATGTGAATTAAAAAAAGAACAAGTAGAGCATTAACATTATCTTAAATAATAAATAGAGGCAAAAAGATTATTTTCTTTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4327033‑4326878‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tctttttgcCTCTATTTATTATTTAAGATAATGTTAATGCTCTACTTGTTCTTTTTTTAATTCACATGATATTTTTATCTTTCTGACGTTTTAAACGTATCAGAAGACGTTATTTATTCTGATAAAAAACAACACACTAAATATAAAATTATTTC > NC_000913/4326902‑4327047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |