| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4456090 = | 63 (0.920) | 3 (0.050) | 3/268 | NT | 4.5% | coding (306/1374 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase |
| ? | NC_000913 | 4456140 = | 65 (0.980) | coding (356/1374 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGCTTTCGCCCAGATGAGCCGAAACCTCAAAGTTCCCCGGCACACCGCCGATTACAAAGCCCGGTTTGTAACCACACTGTTCCAGAATCCAGGTCGCCATTCCCGCGGTGGTGGTTTTGCCGTGTGTACCGGCAACGGCCAGCACCCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4456241‑4456090‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggGAATGGCGACCTGGATTCTGGAACAGTGTGGTTACAAACCGGGCTTTGTAATCGGCGGTGTGCCGGGGAACTTTGAGGTTTCGGCTCATCTGGGCGAAAGCGACTTCTTTGTTATCGAAGCGGATGAGTATGACTGCGCCTTCTTCGA > NC_000913/4456140‑4456287 CGCTTTCGCCCAGATGAGCCGAAACCTCAAAGTTCCCCGGCACACCGCCGATTACAAACCCCGGTTTGTAACCACACTGCTCCAGAATCCAGGTCGCCATTCCCGCGGTGGTGGTTTTGCCGTGTGTATCGGCAACGGCCAGCACCCAG < 2:609880/149‑1CGCTTTCGCCAAGATGAGCCGAAACCTCAAAGTTCCCCGGCACACCGCCGATTACAAAGCCCGGTTTGTAACCACACTGTTCCAGAATCCAGGTCGCCATTCCCGCGGTGGTGGTTTTGCCGTGTGTACCGGCAACGGCCAGCACCCAG < 2:1070677/149‑1 GCTTTCGCCCAGATGAGCCGAAACCTCAAAGTTCCCCGGCACACCGCCGATTACAAAGCCCGGTTTGTAACCACACTGTTCCAGAATCCAGGTCGCCATTCCCGCGGTGGTGGTTTTGCCGTGTGTACCGGCAACGGCCAGCACCCAGC < 1:403975/149‑1 GCTTTCGCCCAGATGAGCCGAAACCTCAAAGTTCCCCGGCACACCGCCGATTACAAAGCCCGGTTTGTAACCACACTGTTCCAGAATCCAGGTCGCCATTCCCGCGGTGGTGGTTTTGCCGTGTGTACCGGCAACGGCCAGCACCCAGC > 2:951072/1‑149 ctgTCGCCCAGATGAGCCGAACCCTAAAAGTTCCCCGGCACACCGCCGATAACAAAGCCCGGTTTGTAACCACACTGTTCCAGAATCCAGGTCTCCATTCCCGCGGTGGTGGTTTTGCCGTGTGTACCGGCAACGGCCAGCACCCAGCG < 2:797916/146‑1 CATTCCCGCGGTGGTGGTTTTGCCGTGTGTACCGGCAACGGCCAGCACCCAGCGGGAATGGCGACCTGGATTCTGGAACAGTGTGGTTACAAACCGGGCTTTGTAATCGGCGGTGTGCCGGGGAACTTTGAGGTTTAGGCTCATCTGGG > 2:236521/1‑149 CCGCGGTGGTGGTTTTGCCGTGTGTACCGGCAACGGCCAGCACCCAGCGGGAATGGCGACATGGATTCTGGAACAGTGAGGTTACAAACCGGGCTTTGTAATCGGCGGTGTGCCGGGGAACTTAGAGGTGTCGGCTCAGCTGGGCGAAA > 1:774539/1‑149 GCGGTGGTGGTTTTGCCGTGTGTACCGGCAACGGCCAGCACC‑‑GCGGGAATGGCGAACTGGATTCTGGAACAGTGTGGTTACAAACCGGGCTTTGTAATCGGCGGTGTGCCGGTGAACTTTGAGGTTTCGGCTCATCTGGGCGAAAGCGA > 2:382568/1‑149 GCGGGAATGGCGACCTGGATTCTGGAACAGTGTGGTTACAAACCGGGCTTTGTAATCGGCGGTGTGCCGGGGAACTTTGAGGTTTCGGCTCATCTGGGCGAAAGCGACTTCTTTGTTATCGAAGCGGATGAGTATGACTGCGCCTTCTT < 2:153519/149‑1 CGGGAATGGCGACCTGGATTCTGGAACAGTGTGGTTACAAACCGGGCTTTGTAAGCGGCGGTGTGCCGGGGAACTTTGAGGTTTCGGCTCATCTGGGCGAAAGCGACTTCTTTGTTATCGAAGCGGATGTGTATGACTGCGCCTTCTTC < 1:764718/149‑1 GGGAATGGCGACCTGGATTCTGGAACAGTGTGGTTACAAACCGGGCTTTGTAATCGGCGGTGTGCCGGGGAACTTTGAGGTTTCGGCTCATCTGGGCGAAAGCGACTTCTTTGTTATCGAAGCGGATGAGTATGACTGCGCCTTCTTCG > 2:513105/1‑149 GGAATGGCGACCTGGATTCTGGAACAGTGTGGTTAGAAACCGGGCTTTGTAATCTTCGGTGTGGCGGGGAACTTTGAGGTTTCGGCTCATCTGGGCGAAAGCGACTTCTTTGTTATCGAAGCGGATGAGTATGACTGCGCCTTCTTCGA < 1:249027/149‑1 CGCTTTCGCCCAGATGAGCCGAAACCTCAAAGTTCCCCGGCACACCGCCGATTACAAAGCCCGGTTTGTAACCACACTGTTCCAGAATCCAGGTCGCCATTCCCGCGGTGGTGGTTTTGCCGTGTGTACCGGCAACGGCCAGCACCCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4456241‑4456090‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggGAATGGCGACCTGGATTCTGGAACAGTGTGGTTACAAACCGGGCTTTGTAATCGGCGGTGTGCCGGGGAACTTTGAGGTTTCGGCTCATCTGGGCGAAAGCGACTTCTTTGTTATCGAAGCGGATGAGTATGACTGCGCCTTCTTCGA > NC_000913/4456140‑4456287 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |