| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,079,856 | C→G | 6.9% | A594P (GCT→CCT) | tktA ← | transketolase 1, thiamine triphosphate‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,079,856 | 0 | C | G | 6.9% | 289.8 / 7.1 | 103 | A594P (GCT→CCT) | tktA | transketolase 1, thiamine triphosphate‑binding |
| Reads supporting (aligned to +/- strand): ref base C (45/50); new base G (4/3); total (49/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 108 total aligned reads displayed.
AGCTCTGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAATCAGTTCCGGCTGACCGGCGCAGTCT > NC_000913/3079708‑3080004 | agcTCTGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAagcagc < 2:575719/149‑1 (MQ=255) tctGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTTACCGCTGTCGGCAGTACGGATTCAAGGTAAGCAGCATc > 1:901284/1‑149 (MQ=255) tctGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATc < 2:1106392/149‑1 (MQ=255) tctGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACACGCTTCTACAGCACCGCGTGCAGTACCCGCTTTCGGCAGTACGGCTTCACGGTAAGCAGCATc > 2:596641/1‑149 (MQ=255) ccGGAGCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGc < 1:122119/149‑1 (MQ=255) gaggagATTCTCCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGGCAGCAATACCCGCTTCTACAGCAACGCGTGCAGAAACCGCATTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTg < 1:614250/149‑1 (MQ=255) gCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGGATGCTGCttacc < 1:561335/149‑4 (MQ=255) gCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGGATGCTGCttacc < 1:356607/149‑4 (MQ=255) gCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGGATGCTGCttacc < 1:406497/149‑4 (MQ=255) aGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGCTAAGCAGCATCCTGCTTGTCaa > 2:267414/1‑149 (MQ=255) aTTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAAt < 2:662096/149‑1 (MQ=255) aTTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAAt < 1:1133512/149‑1 (MQ=255) aTTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAAt > 1:247948/1‑149 (MQ=255) aTTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGGGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAAt > 2:911086/1‑149 (MQ=255) ttCACCGCAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATg < 2:208710/149‑1 (MQ=255) ttCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATg > 1:985250/1‑149 (MQ=255) tCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGGGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCGTCCTGCTTGTCTAATGc > 2:594962/1‑149 (MQ=255) tCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGc < 1:32077/149‑1 (MQ=255) tCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGc < 1:762953/149‑1 (MQ=255) aCCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGt < 2:396168/149‑1 (MQ=255) ccGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTc > 1:163367/1‑149 (MQ=255) cGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCTGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCg < 1:993592/149‑1 (MQ=255) cGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCg > 1:657831/1‑149 (MQ=255) cGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCg < 2:962909/149‑1 (MQ=255) aaGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCTTCGGt > 2:719749/1‑149 (MQ=255) aGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTa < 1:559168/149‑1 (MQ=255) gtggtCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCCGCTTCCTGCTTGTCAAATGCGTCGGTAGa > 2:489012/1‑149 (MQ=255) ggtCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACGCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCTTCCTGCTTGTCAACTGCGTCGGTAGACg < 2:113259/149‑1 (MQ=255) gtCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAAAACCCGCATCTACAGCAACGAGAGCAGTAACCGCTATCGGCAGAACGGAGTCACCGTAAGCAGCATCCAGCTTGTCAAATGCGTCGGTAGACgg > 1:298139/1‑149 (MQ=38) tCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCTCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGc < 1:1176092/149‑1 (MQ=255) tCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGc < 1:246093/149‑1 (MQ=255) ccGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGa > 2:1082342/1‑149 (MQ=255) cgacgaTAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTAAGCAATCCCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCTGTACGGATTCACGGTAAGCAGCATCCTGCGTGTCAAATGCGTCGGTAGACGGCATGGac > 1:899634/1‑149 (MQ=255) acgaTTGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGATTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGacac < 2:36292/149‑1 (MQ=255) acgaTAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGacac < 1:1138257/149‑1 (MQ=255) gaTAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTGGTCAAATGCGGCGGTTGACGGCATGGAcaccc > 2:1045304/1‑148 (MQ=255) tAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAcg < 2:182648/149‑1 (MQ=255) cACCGTTCAGGCCACCATACTGGTACCAGTAGTCAGAAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCAGGGTAAGCAGCATCCTGCTTGTCAAATGCGGCGGTAGACGGCATTGACACCAcgcgc < 2:899265/149‑1 (MQ=255) cACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAcgcgc > 1:152481/1‑149 (MQ=255) aCCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACCCCAcgcgcg > 2:96296/1‑149 (MQ=255) ttCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCttt > 2:43417/1‑149 (MQ=255) ttCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCttt < 1:552068/149‑1 (MQ=255) aGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAc < 1:715137/149‑1 (MQ=255) aGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCAACAGCACCGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCGTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCCCGCGCGCGTTCAc > 1:819589/1‑149 (MQ=255) gCCAACATACTTGTACGAGTAGTCAGCAATACACGCTTCTACAGCAACGCGTGCAGTAACAGCGTTCGGCAGTACGGATTCACGGTAAGCAGGATCCTGCTTGTCAAATGCGTCGGTAGACTGCATGGAAACCACGCGCGCTTTCACGc > 1:551946/1‑149 (MQ=255) ccAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGcc < 1:433410/149‑1 (MQ=255) aaCATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCtt < 2:871959/149‑1 (MQ=255) aaCATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGGCAAATGCGTCGGTAGCCGGCATGGACACCACGCGCGCTTTCACGCCtt > 2:1059127/1‑149 (MQ=255) aTACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCgg < 1:170662/149‑1 (MQ=255) aTACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCgg < 1:1157525/149‑1 (MQ=255) aCTTGTACCAGTAGTCAGCAATACCCTCTTCAACAGCAACGCGTGCAGTAACCGCTTTAGGCAGTACGGATTCACGGTAAGCAGTATCCTGCTTGTCAAATGCGTCGGTAGACGGCATTGACACCACGCGCGCTTTCACGCCTTCGGca < 1:898844/149‑1 (MQ=255) aCTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGca < 1:298754/149‑1 (MQ=255) tGTACCAGTAGTCCGCAATCCCCGCTTCTACAGCCACGCGTGCAGTAACCGCTTTCGGCAGTCCGGATTCACGGTAAGCAGCATCCTGCTTGTCATATGCGTCGGTATACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGcagtc < 2:553968/149‑1 (MQ=255) gTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGcagtca < 1:176668/149‑1 (MQ=255) ccAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGtt > 1:659005/1‑149 (MQ=255) agtagtCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCCCGCCTTCGGCCGTCAGtttt > 2:659541/1‑149 (MQ=255) agtagtCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGtttt < 1:927734/149‑1 (MQ=255) gtagtCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGttttt > 2:472310/1‑149 (MQ=255) gtagtCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGttttt < 1:993847/149‑1 (MQ=255) gtagtCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTATCACGCCTACGGCAGTCAGtattt > 1:533315/1‑149 (MQ=255) tagtCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTc < 2:521184/149‑1 (MQ=255) tagtCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTc < 1:583889/149‑1 (MQ=255) tagtCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTc < 2:247948/149‑1 (MQ=255) tCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTa < 1:50317/149‑1 (MQ=255) tCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGGACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTa > 2:551029/1‑149 (MQ=255) tCAGCAATACCCGCTTCTACAGCAACCCGTGCAGTAACCGCTTTCGGCAGTACGGATGCACGGTAACCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTa < 2:110013/149‑1 (MQ=255) cgCAATACCCGCGTCTCCAGCAAAGCGTGCAGTAACCGCTTTCGGCAGTACGGAGGCACGGTAAGCAGGATCCTGGTTGTCAAATGCGGGGGTAGCGGGGATGGACCCCTGGCGCGATGTCGCGCGGTGGGCTGTCAGTTGATCGTAgg > 2:511422/2‑149 (MQ=255) gCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCGTCGGCAGTCAGGTTTTCGTTGgc > 1:963286/1‑149 (MQ=255) ccGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACa > 2:1114437/1‑149 (MQ=255) gCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGc < 1:167381/149‑1 (MQ=255) tCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAg < 2:163367/149‑1 (MQ=255) tCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAg > 1:556896/1‑149 (MQ=255) tCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCGTTCACGCCGTCGGCAGTCAGTTTATAGTAGGCAGCAccagccag > 1:713593/1‑149 (MQ=255) tACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATGCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGtt < 1:824439/149‑1 (MQ=255) aCAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTc > 1:1128966/1‑149 (MQ=255) aGCAACGCGTGAAGTAACCGCTTTCGCCAGTACGGATTTACGGTAAGCAGCATCCTGCTTGTCAAATGCGACGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCGGTCATTTTTTCGTTGGCAGCAACCGCCAGTTCaa > 2:876766/1‑149 (MQ=255) cAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCATCt > 1:938012/1‑149 (MQ=255) cgTGCACTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCAGCCTGCGTGTCAACTGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGa < 2:92142/149‑1 (MQ=255) aGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCTTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTACGGCAGTCAGTTTTTCGTAGTCAGCAACAGCCAGTTAAACTACTGAACCgg > 1:1044539/1‑149 (MQ=255) aGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGAAGGCATGGACACCACGCTCGCTTTCACGCCTTCGGCAGTCAGTGTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCgg > 2:316367/1‑149 (MQ=255) tAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTa < 2:399555/149‑1 (MQ=255) aaCCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCTACAGCCAGTTCAACTGCTGCACCGGTAg > 1:256039/1‑149 (MQ=255) aaCCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAg < 2:659005/149‑1 (MQ=255) cGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACCCCACGCGCGCTTTACCGCCTTCGGCAGTCAGTTTTTCGTAGGCCGCACCAGCCAGTTCAACTTCGGAACCGGTAGCGa > 1:1149331/1‑149 (MQ=255) cGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATACTGCTTGTCAAATGCGTCGGTAGCCGGCATGCACCCCACGCGCGCTTTCACGCCTTCGGCAGTCAGATTTTCGTAGGCAGAAACACCAAGTAAAACTTCTGAACCGGTAGCGa > 2:874123/1‑149 (MQ=255) cGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGaaaa < 1:267414/149‑1 (MQ=255) ggCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAAt > 2:845211/1‑149 (MQ=255) aGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAATCAg > 2:1154794/1‑149 (MQ=255) cGGAATCACGTTAAGCAGCATCCTGCTTGTCAAATGCGTCTCTAGACGGCATGGACACCACTCGCGCTTTCACGCCTTCTGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTTAACCGGTAGCGATGAAAATCAGTTcc < 2:848938/149‑1 (MQ=255) tgATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACTCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAATCAGTTCCg < 1:784428/148‑1 (MQ=255) gATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAATCAGTTCCgg < 2:842411/149‑1 (MQ=255) gATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAATCAGTTCCgg < 2:85352/149‑1 (MQ=255) gATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAATCAGTTCCgg < 2:29709/149‑1 (MQ=255) tttgacaaGCAGGATGCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAATCAGTTCCGGCTGa > 1:844756/7‑149 (MQ=255) aCGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGGAGCGATGCAAATCAGTTCCGGATGAc > 1:241715/1‑149 (MQ=255) caaGCAGGATGCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGCAAATCATTTACGGCTGACCGgc > 1:801150/2‑149 (MQ=255) gcagcaTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAATCAGTTCCGGCTGACCGGCGCa < 1:1082342/149‑1 (MQ=255) gcaTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAATCAGTTCCgg < 1:317524/134‑1 (MQ=255) gcaTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAATCAGTTCCgg > 2:317524/1‑134 (MQ=255) caTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACCCCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACCGCCAGTTCACCTTCTGCACCGGTAGCGATGAAAATCAGTTCCGGCTGCCCGGCGCCGTCt > 1:319771/1‑149 (MQ=255) | AGCTCTGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAGGCCAACATACTTGTACCAGTAGTCAGCAATACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAATCAGTTCCGGCTGACCGGCGCAGTCT > NC_000913/3079708‑3080004 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |