| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 645,074 | T→C | 5.7% | intergenic (‑71/+43) | rna ← / ← citT | ribonuclease I/citrate/succinate antiporter; citrate carrier |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 645,074 | 0 | T | C | 5.7% | 239.9 / 3.0 | 86 | intergenic (‑71/+43) | rna/citT | ribonuclease I/citrate/succinate antiporter; citrate carrier |
| Reads supporting (aligned to +/- strand): ref base T (30/51); new base C (3/2); total (33/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AACGCTAAGGCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGATTTCAC > NC_000913/644927‑645218 | aaCGCTAAGGCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGACTACTAGCTATTAAATCATAAAAAAGCCCGCCAGGTGTGCTTa > 2:1137207/1‑149 (MQ=255) gCTAAGGCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCt > 1:519981/1‑149 (MQ=255) gCTAAGGCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGGGGTCTTACCt > 1:362350/1‑149 (MQ=255) ggCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTggcgg < 2:735255/149‑1 (MQ=255) ggCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTggcgg > 1:452877/1‑149 (MQ=255) ggCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGATTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTggcgg < 1:268960/149‑1 (MQ=255) ggCGTAGGCAGACGAGCAGGGACGCAGAGCAACCGCGCGCAACGCGGCGTTACGCCAGAATGCGTTCATAATGGGGGTGGATCTCATACATACACTGAATACTATCTATTAACTCATACATAAGCCCGCCAGGTAAGCCCACCTggcgg < 2:703783/149‑1 (MQ=255) gCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTAAGCCCACCTggcggg < 1:1095031/149‑1 (MQ=255) cGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTggcgggc < 1:298146/149‑1 (MQ=255) ttGGCAGACCTGAATCGAAGCAGACACACCGGGAGGATCTCGGCGTTACGCCTGAATGCTTTCATAATCGGATTGGAACTCATACATACACTGAATAATATCTATTAAATCATAAAACAGCCCGCCAGGTGGGCTTACCTGGCGGGCGt < 2:1154450/149‑1 (MQ=255) ttGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGt < 1:199501/149‑1 (MQ=255) ggCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGtga > 2:180910/1‑149 (MQ=255) gaagagcagGGAAGCCGAGAACCCGCGAGCAACGCGGCGTTACGCCAGTATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATCCTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTgatgat < 2:1136742/149‑1 (MQ=255) gaagagaagGGAAGCAGAGAACCCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTgatgat < 1:437943/149‑1 (MQ=255) aagagaagGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGattatt > 1:591204/1‑149 (MQ=255) agagaagTGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACAATCTATTAAATAATAAAAAAGCCCCCCACGTGGGCTTACCTGGCGGGCGTGATGAttt > 2:269741/1‑149 (MQ=255) gagaagGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTa > 1:228295/1‑149 (MQ=255) taagGGAATCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTAtt < 1:954941/148‑1 (MQ=255) gaagGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTAtt < 1:431326/149‑1 (MQ=255) aagGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTc < 2:1164543/149‑1 (MQ=255) aagGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTc < 2:828441/149‑1 (MQ=255) agGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCa < 1:1062536/149‑1 (MQ=255) ggAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGc < 1:755244/149‑1 (MQ=255) gCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGttt < 1:1171717/149‑1 (MQ=255) cAGAGAAACCGCGCGCAACGCGGCGTTACGCCAGAAGGCTGTCATAATGGGTGTGGATCTCATACATAAACTGATTACTATCTATTAAAGCATAAAAAAGCCCGCCAGGGGGGCTTACCGGGCGGGCTTGATGCTTTATTCTGCGTTTg > 2:927719/1‑149 (MQ=255) agagAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTgg < 2:54191/149‑1 (MQ=255) gaAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGa < 1:200777/149‑1 (MQ=255) aaaCCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGaa < 1:942038/149‑1 (MQ=255) aaCCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAAc < 1:421099/149‑1 (MQ=255) ccGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGt < 1:1058990/149‑1 (MQ=255) cgcgAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTa > 2:429917/1‑149 (MQ=255) gcgAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTAt < 2:46707/149‑1 (MQ=255) gcgAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTAt < 2:715815/149‑1 (MQ=255) gcgAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTAt < 1:500851/149‑1 (MQ=255) gcgAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTAt < 1:76626/149‑1 (MQ=255) gcgAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAAAACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTAt < 1:505306/149‑1 (MQ=255) gAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTa < 1:385461/149‑1 (MQ=255) cAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTTAATCATAAAAACGCCAGCGAGGTGGGCTTACCTGGCGGGCATGATGATTTATTCAGCGTTTGGCGAACGTATTAGtt > 1:221898/1‑149 (MQ=255) aaCGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTATTAAAGCGTTTGGCGAACGTATTAGTTc > 1:844915/1‑149 (MQ=255) aCGCGGCGTTACGCCAGAATGCTTTCATAATGGGAGTGCAACTCATACATACACTGAATACAATCTATTAAATCATAAAAAATCCCGCCAGGTAGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTATGGCGAACGTATTAGTTcc > 2:924388/1‑149 (MQ=255) cgtggggTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCca < 2:85730/143‑1 (MQ=255) ggcgTTACGCCAGAATGCTTTCATAATGGGTGTTGAACTCATACATACACTGAATACTAGCTATTAAATCATAAAAAAGACCGCCATGTGGGCTTACCTTGCGGGCGTGATTATTTATTCAGCGTTTGGCTAAAGTATTAGTTCCACAt < 2:20508/149‑1 (MQ=255) ggTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACCTACACTGAATACTATCTATTAAATCATAACCCAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATgg < 1:130470/148‑1 (MQ=255) gTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGc > 1:30633/1‑149 (MQ=255) aaTGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGgc < 1:227118/149‑1 (MQ=255) gcgatCATAATTCGTGTTGAACTCATACATACCCTTTATACTATCTTTTAATTCAGAAAAAAGCCCCGCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGATTGGCGAACGTATTAGTTCCACATGGCGAGAATCGgccag < 2:1119880/145‑1 (MQ=255) tttCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGgccagcc > 2:721135/1‑149 (MQ=255) tttCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGgccagcc > 1:484295/1‑149 (MQ=255) tCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGccaa < 1:186493/149‑1 (MQ=255) cATTATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGccaac < 1:568109/149‑1 (MQ=255) cATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGccaac < 2:452877/149‑1 (MQ=255) aTAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGccaacc < 1:468285/149‑1 (MQ=255) aaTGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTCGCGGGCGTGATGATTTATTCAGCGTTTGGCGACCGTATTAGTTCCACATGGCGAGAATCGGCCAGccaaccaa > 2:634104/1‑149 (MQ=255) aaTGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATAATAAAAAAGCAAGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGccaaccaa < 2:709383/149‑1 (MQ=255) aTGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCcaaccaac < 1:429917/149‑1 (MQ=255) aaCTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATag < 2:1095210/149‑1 (MQ=255) aaCTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGGGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATag < 2:789818/149‑1 (MQ=255) atacatacACTGAATACTATCTATTAAATCATAATAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGAGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCACCCAGCAGCAACATTGAGATg > 2:237716/1‑149 (MQ=255) atacatacACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGAATTAGTTCCACATGGCCAGCATCGGCCAGCCAACCAACAGCAACATAGAGATg > 2:61404/1‑149 (MQ=255) tacaCTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGTCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAAt < 2:645602/149‑1 (MQ=255) tacaCTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAAt < 2:305508/149‑1 (MQ=255) cTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCAcc > 1:194453/1‑149 (MQ=255) tGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCAccc > 2:372066/1‑149 (MQ=255) aTACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGa > 1:959615/1‑149 (MQ=255) tACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCATACAAGGCGGGCGTTATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAAACGGCCAGCCAACCAACAGCAACATAGAGATGTAAATAACCCAGaa > 2:216433/1‑149 (MQ=255) ctatctatTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGa < 1:339007/149‑1 (MQ=255) ctatctatTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGa < 1:221140/149‑1 (MQ=255) tatTAAATGATAAAACAGCCCGCCAGGTGGGCTTACATGGCGAGCGTGATGATTTATTCAGCGTGTGGCGAACTTATTAGATCCAGATGGCGATAATCTGCCAGCCAACGAACAGCAACATAGAGATGTAATTCACCCCGAAGATTgcg < 2:437398/149‑1 (MQ=255) tatTAAATCATAACAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTgcg < 2:143065/149‑1 (MQ=255) tatTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTgcg < 1:337360/149‑1 (MQ=255) tatTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTgcg < 2:289500/149‑1 (MQ=255) atTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTgcgc > 1:132623/1‑149 (MQ=255) ttAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGcc > 2:882347/1‑149 (MQ=255) ttAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGcc > 1:1158010/1‑149 (MQ=255) aaTCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAg > 2:66744/1‑149 (MQ=255) tCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAgtc < 1:269741/149‑3 (MQ=255) cATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCCGCCCACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGCCg > 2:835202/1‑149 (MQ=255) tcatcacgCCCGCCAGGTAAGCCCACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGcc > 2:430580/8‑149 (MQ=39) aaaaaGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAg < 1:97252/149‑1 (MQ=255) tcacgCCCGCCAGGTAAGCCCACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGCACGTATTAGTTCCACATGGCGAGAATCGGCCCGCCCACCAACAGCAACAAACAGCAGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGt > 2:100268/5‑149 (MQ=255) aaaaGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCACCCAACAGCAACATAGAGATGTAAATCACCCCGAAGAATGCGCCAAGACGCCAGt > 2:962185/1‑149 (MQ=255) tgCCCGCCAGGTGGGCTTACCTTGCGGGCATGATGATTTATTAAGTGTTTGGAGAACGTATTTGTTAGACATGGCGAGAATCTTCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAACATTGCGCCAACACGCCAGTAAt < 2:221898/148‑1 (MQ=255) ccGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCtt > 1:190716/1‑149 (MQ=255) ccGCCAGGTAAGCCCACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCCCATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGCTTGCGCCACGACGCCAGTAATCtt > 2:952319/1‑149 (MQ=255) gTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGAttt < 2:519981/149‑1 (MQ=255) ggCGTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACAGGGCGAGAATCCGCCAGCCAACCAACAGCAACCTAGAGATGTAAATCACCCCGACGCTTGCGCCAAGACGCCAGTAATCTTTTGATTTcac < 2:659914/149‑1 (MQ=255) | AACGCTAAGGCGTTGGCAGAAGAGAAGGGAAGCAGAGAAACCGCGAGCAACGCGGCGTTACGCCAGAATGCTTTCATAATGGGTGTGGAACTCATACATACACTGAATACTATCTATTAAATCATAAAAAAGCCCGCCAGGTGGGCTTACCTGGCGGGCGTGATGATTTATTCAGCGTTTGGCGAACGTATTAGTTCCACATGGCGAGAATCGGCCAGCCAACCAACAGCAACATAGAGATGTAAATCACCCCGAAGATTGCGCCAAGACGCCAGTAATCTTTTGATTTCAC > NC_000913/644927‑645218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |