Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,908,5140AT26.4% 183.4 / 14.9 111intergenic (‑148/+35)pstB/pstAphosphate ABC transporter ATPase/phosphate ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base A (59/22);  new base T (0/29);  total (59/52)
Fisher's exact test for biased strand distribution p-value = 5.04e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 125 total aligned reads displayed.

TTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTC  >  NC_000913/3908375‑3908653
                                                                                                                                           |                                                                                                                                           
tttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGgaga                                                                                                                                             <  1:452596/140‑1 (MQ=255)
tttCCTCATCGGGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGgaga                                                                                                                                             <  1:931282/140‑1 (MQ=255)
 ttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGagag                                                                                                                                            >  1:1620271/1‑140 (MQ=255)
 ttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGagag                                                                                                                                            >  1:1176329/1‑140 (MQ=255)
  tCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAgg                                                                                                                                           >  2:601535/1‑140 (MQ=255)
    cTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGt                                                                                                                                         <  1:1741316/140‑1 (MQ=255)
         cGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                                                                                                                    >  2:749897/1‑140 (MQ=255)
         cGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                                                                                                                    >  2:749619/1‑140 (MQ=255)
         cGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                                                                                                                    >  2:749599/1‑140 (MQ=255)
           tGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTg                                                                                                                                  >  2:1393351/1‑140 (MQ=255)
                        tCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCgt                                                                                                                     >  1:1439483/1‑140 (MQ=255)
                           cTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTc                                                                                                                  >  1:1109198/1‑140 (MQ=255)
                           cTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTc                                                                                                                  >  1:764097/1‑140 (MQ=255)
                           cTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTc                                                                                                                  >  1:813082/1‑140 (MQ=255)
                            tAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAATACCGTGTCa                                                                                                                 >  2:1641950/1‑140 (MQ=255)
                              aTCCGGCTTACCGTCGGCCGGATCAGGGTTTCACGCCGCATCGGCCAATGTTTTAACCGTGTACTCATTCAAAATGGCGCTCGGTCGGCCCCCACGCCCCTGTGGGGTGCGGTTTTGGGTGTGGGGAAAACCGTGTCAGc                                                                                                               <  1:1660626/140‑1 (MQ=255)
                              aTCAGGCTTACCTTAGGCCGTATCTGGCGTTCACGCCGCATCCGGCAATGTTTTAACCGTGTACTGAGTCAAAATGGCGCTGGGTCGGACCCCTCGCCCCTCTGGGGTGTGGTTTAGGGTGAGGGGAAAACCGTGTCAGc                                                                                                               <  1:653979/140‑1 (MQ=37)
                                       aCCGTTGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAATGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAc                                                                                                      <  2:1751457/140‑1 (MQ=255)
                                       aCCGTAGGCCGTATCTGGCGTTCACGCCGCATCCGTAAAAGTGTTAACCGTGTACAGAGTCAAAACGGCGCTCGGTCGGGCCCCTCGCCCCTCTGGGGAGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAc                                                                                                      <  2:864854/140‑1 (MQ=38)
                                       aCCGTAGGCCGGATCAGGCGTTCTCGCCGCATCCGGCAATGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAc                                                                                                      <  2:1790295/140‑1 (MQ=255)
                                       aCCGTAGGCCGGATCAGGCGTTCACGCCGCAACCGGCAAAGTGTTAACCGTGTACAGACTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAc                                                                                                      <  2:1790303/140‑1 (MQ=255)
                                        ccGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAcc                                                                                                     >  1:531545/1‑140 (MQ=255)
                                             ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:1491730/1‑140 (MQ=255)
                                             ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:1494269/1‑140 (MQ=255)
                                             ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:377462/1‑140 (MQ=255)
                                             ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:850199/1‑140 (MQ=255)
                                                        gCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCa                                                                                     >  2:983742/1‑140 (MQ=255)
                                                         cGTTCACGCCGCATCCGGCCAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaa                                                                                    >  1:1151396/1‑140 (MQ=255)
                                                            tCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaaaaa                                                                                 >  1:70806/1‑140 (MQ=255)
                                                             cACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAaac                                                                                >  1:1491115/1‑140 (MQ=255)
                                                             cACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAaac                                                                                >  1:1491133/1‑140 (MQ=255)
                                                                   gcATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcgcg                                                                          >  2:953992/1‑140 (MQ=255)
                                                                   gcATCCGCAAATGTGTTAACCGTTTACAGAGACAAAATGGCGCTCGGCGGGCCCCCTCGCCCCTCTGGGGTGTGGTTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcgcg                                                                          <  1:947669/140‑1 (MQ=255)
                                                                     aTCCGGAAACGTGTTAACCGTGTTCAGAGTCAACAAGGCGCTCGGTCGGCCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcgcgcg                                                                        <  2:1807379/140‑1 (MQ=38)
                                                                        cGGAAATGTTTTAACCGTTTACTGAGTCAAAATGGCGCTGGGTCGGCCCCCTCGCCCCTCGGGGGTGTGGGTTCGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCa                                                                     <  1:49369/140‑1 (MQ=255)
                                                                          gCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGa                                                                   >  1:1326726/1‑140 (MQ=255)
                                                                                    aaCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagca                                                         >  2:813678/1‑140 (MQ=255)
                                                                                     aCCTTGTACAGAGTCAAAAAGTCGCTCGGTCGGTCCCCTCGACCCTCTGGGGAGAGGGTTATGGTGAGGGGAAAACCGTGTCAGAAATATCAAACGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcatcag                                                        >  2:1309136/1‑140 (MQ=38)
                                                                                     aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  1:1001348/1‑140 (MQ=255)
                                                                                     aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  1:1263975/1‑140 (MQ=255)
                                                                                     aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  2:644960/1‑140 (MQ=255)
                                                                                     aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCATCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  1:6082/1‑140 (MQ=255)
                                                                                     aCCGTGTACAGAGACAAACAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        <  2:521828/140‑1 (MQ=255)
                                                                                     aCCGTGTACACAGCCAAAATGGCGCTCGGTCGGTCCCATCGCCCCTCGGGGGTGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        <  2:519702/140‑1 (MQ=39)
                                                                                         ggtACAGAGTCAAAAAGGCGCTCGGTCGGCCCCCTCGCCCCTAGGGGGAGTGGGTTAGTGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCCGCAGCAGt                                                    <  2:1491703/139‑1 (MQ=255)
                                                                                          gtACAGTGTCAAATTGGAGCTCGGTCGGTCCCCTCGCCCCTGTGGGGAGAGGGTTAGGGTGTGGGGAAATCCGTGTCAGCAATATCATCCGTGTTTATTGTTCGCAAATACATCGCGCGCCAGAATGTTCAGCAGCAGTa                                                   >  2:536763/1‑140 (MQ=37)
                                                                                          gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGt                                                                                                                                   <  2:1606208/60‑1 (MQ=255)
                                                                                          gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa                                                   >  1:546770/1‑140 (MQ=255)
                                                                                          gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa                                                   >  2:536551/1‑140 (MQ=255)
                                                                                          gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa                                                   >  1:332904/1‑140 (MQ=255)
                                                                                          gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa                                                   >  1:263710/1‑140 (MQ=255)
                                                                                          gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa                                                   >  1:1173813/1‑140 (MQ=255)
                                                                                              cgtgTCAAACGGGCGCGCGGTGGGGCCCCTCGCCCCTGGGGGGAGTGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:139009/137‑1 (MQ=255)
                                                                                              cgcgTCAAAACGGCGGTGGGTCGGTCCCCGCGCCCCTGGGGGGAGTGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:138873/137‑1 (MQ=255)
                                                                                              atagTCAAAATGGCGCTGGGTCGGTCCCCTCGCCCCTCTGGGGTGTGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:99977/138‑1 (MQ=39)
                                                                                              agtgTCAAAACGGCGCTCGGTCGGTCCCCTCGCCCCTCGGGGGTGAGGTTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:1286226/137‑1 (MQ=255)
                                                                                              agcgTCAAAAAGGCGCTCGGTCGGTCCCATCGCCCCTCTGGGTAGAGGTTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  2:501821/137‑1 (MQ=255)
                                                                                              agattaaaaatGGCGCTGGGTGGGTCCCCGCGCCCCTGTGGGTAGAGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:1366073/134‑1 (MQ=255)
                                                                                              agagTCAAAATGGCGCTCGGTCGGTCCCCACCCCCCTGTGGGGAGTGGTTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:64841/140‑1 (MQ=255)
                                                                                              agagTCAAAACGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGTGTGGGTTCGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:230956/140‑1 (MQ=39)
                                                                                              agagTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGTGTGGTTTTGGTTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:64785/140‑1 (MQ=255)
                                                                                              agagTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  2:1747869/140‑1 (MQ=255)
                                                                                              agagTCAAAAAGGCGCGCGGTCGGTCCCCGCGCCCCTCGGGGTTGTGGTTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:1286281/140‑1 (MQ=255)
                                                                                              agagTCAAAAAGGCGCGCGGCCGGACCCCCCGCCCCTCTGGGGAGAGGTTTAGGGAGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  2:502094/140‑1 (MQ=39)
                                                                                              agagTAAAAACGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:1496929/140‑1 (MQ=255)
                                                                                                agTCAAAACGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGTGGGTTCGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGcaca                                             <  1:638729/140‑1 (MQ=255)
                                                                                                agTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTCGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGcaca                                             <  2:879298/140‑1 (MQ=255)
                                                                                                agTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGcaca                                             >  2:1491344/1‑140 (MQ=255)
                                                                                                agTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGcaca                                             >  1:1745578/1‑140 (MQ=255)
                                                                                                agTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGcaca                                             <  2:327118/140‑1 (MQ=255)
                                                                                                agTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGATCAGCAGCAGTACGcaca                                             >  1:265406/1‑140 (MQ=255)
                                                                                                 gTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAg                                            >  1:192020/1‑140 (MQ=255)
                                                                                                 gTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAg                                            >  1:881347/1‑140 (MQ=255)
                                                                                                 gTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAg                                            >  1:262805/1‑140 (MQ=255)
                                                                                                     aaacGGCGCTCGGTCGGACCCCTCGCCCCTCTGGGGAGAGGTTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  2:457837/140‑1 (MQ=255)
                                                                                                     aaaaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  1:1422271/140‑1 (MQ=255)
                                                                                                     aaaaGGCGCTCGGTCGGTCCCCTCGCCCCTCGGGGGAGTGGGTTAGGGTGAGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  1:1422522/140‑1 (MQ=255)
                                                                                                     aaaaGGCGCTCGGTCGGTCCCCTCGCCCCACTGGGGAGAGGGTTAGGTTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  2:870932/140‑1 (MQ=255)
                                                                                                     aaaaGGCGCTCGGTCGGTCCCCGCGCCCCTCTGGGGTGAGGTTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  1:484913/140‑1 (MQ=255)
                                                                                                       acggCGCTGGGTCGGTCCCCTCGCCCCTGTGGGGTGTGGTTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAAt                                      <  1:759582/138‑1 (MQ=255)
                                                                                                       acggCGCTCGGTCGGCCCCCTCGCCCCTCTGGGTTGTGGGTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAAt                                      <  1:1386307/138‑1 (MQ=255)
                                                                                                          gcgcTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGAt                                   >  2:1698093/1‑140 (MQ=255)
                                                                                                                 gtcggtcCCCTCGCCCCTTTGGGGAGTGGTTTTGTGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAcc                            <  2:70806/140‑1 (MQ=255)
                                                                                                                  tcggtcCCCTCGCCCCTGTGGGGAGTGGTTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAccc                           <  1:1063074/140‑1 (MQ=255)
                                                                                                                  tcggtcCCCTCGCCCCTCTGGGGTGTGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAccc                           <  1:1062070/140‑1 (MQ=255)
                                                                                                                     gtcCCCTCGCCCCTCTGGGGAGTGGTTTCGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCgg                        <  1:281967/140‑1 (MQ=255)
                                                                                                                       cccctcgcccctcgGGGGAGAGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGcc                      <  1:1573042/140‑1 (MQ=255)
                                                                                                                        ccccCGCCCCTCTGGGGTGTGGTTTTGGTTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGccc                     <  1:1246460/140‑1 (MQ=255)
                                                                                                                        cccTCGCCCCTCTGGGGAGAGGTTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGccc                     <  2:1358177/140‑1 (MQ=255)
                                                                                                                            cGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAACACCGTGTCAGCCATATCAACCGTGATTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGAACGCACAGGGTAATGATCAATACCCCGGCCCAGGc                 >  2:1158776/1‑140 (MQ=255)
                                                                                                                                  tctGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtg           >  2:102226/1‑140 (MQ=255)
                                                                                                                                  tctGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtg           >  1:1147053/1‑140 (MQ=255)
                                                                                                                                        gagtGGGTTTGGGTGAGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCa     <  1:1759994/140‑1 (MQ=255)
                                                                                                                                        gagtGGGTTAGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCa     <  1:197357/140‑1 (MQ=255)
                                                                                                                                         agagGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCAt    >  2:320602/1‑140 (MQ=255)
                                                                                                                                         agagGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCAt    >  2:965288/1‑140 (MQ=255)
                                                                                                                                           agGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTc  >  1:513459/1‑140 (MQ=255)
                                                                                                                                           agGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTc  >  2:1382956/1‑140 (MQ=255)
                                                                                                                                           agGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTc  >  2:1381645/1‑140 (MQ=255)
                                                                                                                                           agGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTc  >  1:790687/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                           
TTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTC  >  NC_000913/3908375‑3908653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑