| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4633104 | 346 (1.140) | 6 (0.020) | 4/264 | NT | 1.7% | noncoding (14/140 nt) | REP355 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP355 (repetitive extragenic palindromic) element; contains 3 REP sequences |
| ? | NC_000913 | = 4633154 | 349 (1.200) | noncoding (64/140 nt) | REP355 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP355 (repetitive extragenic palindromic) element; contains 3 REP sequences | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCGAAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4632950‑4633104‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gataagGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGT < NC_000913/4633154‑4633006 GCGAAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTG > 1:2157858/1‑150 CGAAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGA > 1:4536599/1‑150 CGAAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGA < 1:4266126/150‑1 CGAAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGA > 1:194037/1‑150 CGAAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGA > 1:1982274/1‑150 CGAAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGA < 2:140961/150‑1 GAAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGAT < 2:1326028/150‑1 AAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATA > 1:1080030/1‑150 AAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATA > 1:323248/1‑150 AAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATA > 1:1174404/1‑150 AATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAA > 1:4961650/1‑150 AATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAA < 2:4667272/150‑1 ATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTCGGCCTGATAAG > 1:2023946/1‑150 ATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAG > 2:528846/1‑150 ATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAG < 1:2021480/150‑1 ATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAG > 1:1458335/1‑150 CATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑GGCGCATCCGGCATTCGGTGCACGATGCCTGATG < 2:1885935/150‑1 CGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGAT < 2:143629/150‑1 CGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGAT < 2:143799/150‑1 CGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGC < 2:1281562/150‑1 CGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGC < 2:1281750/150‑1 GATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAG < 1:4276560/150‑1 GATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCc < 1:4209074/150‑2 GATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCA < 2:419010/150‑1 GATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCA < 1:3658186/150‑1 GATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCA > 1:2718185/1‑150 GATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGAC < 2:4774511/122‑1 GATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGAC > 1:4774511/1‑122 GATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGAC > 1:4774552/1‑122 GATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGAC < 2:4774552/122‑1 ATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCAC < 2:3329724/150‑1 ATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCAC > 2:2187977/1‑150 ATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCAC > 1:1173230/1‑150 ATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCAC < 1:4917123/150‑1 ATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCAC < 1:4612548/150‑1 ATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCAC > 1:4376164/1‑150 ATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCAC < 1:3552018/150‑1 AGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCG > 1:933947/1‑150 AGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCG > 1:933479/1‑150 AGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCG > 2:4765808/1‑150 AGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCG > 2:4765826/1‑150 GGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGT > 1:2976886/1‑150 GGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAG < 1:60869/132‑1 GGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAG > 2:60869/1‑132 GCGAAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4632950‑4633104‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gataagGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGT < NC_000913/4633154‑4633006 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |