New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2455060	74 (1.250)	6 (0.110)	3/258	NT	7.7%	intergenic (‑59/+23)	yfcU/yfcV	pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein/putative fimbrial‑like adhesin protein
	?	NC_000913	= 2455066	75 (1.350)					intergenic (‑65/+17)	yfcU/yfcV	pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein/putative fimbrial‑like adhesin protein

TCGTCTTCAGCCCAGACACTGCTATAACTCCCTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2454907‑2455060 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccatagcGACACTGCTATGGGGTATTTAAATGGATTTTGACCGAACAAGAATAAAAACGGATAAAAACGTGTATGCCTGACCATTCTCTTTTTCGATTACGGATTCTTCCGTGGTGCATTGCGCTGGCAATGTCAGGGAGTTATAGCAGTGTCT  <  NC_000913/2455066‑2454920                                                                                                                                                                                                                                                                                                               TCGTCTTAAGCCCAGACACTGCTATAACTCCCTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCC                                                                                                                                                          <  1:681353/149‑1  CGTCTTCAGCCCAGACACTGCTATAACTCCCTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCA                                                                                                                                                         <  1:7094/149‑1    TCTTCAGCCCAGCCCCTGCTATAACTCCCTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACCCGTTTTTATCCGGTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATA                                                                                                                                                       >  1:465486/1‑149    TCTTCAGCCCAGACACTGCTATAACTCCCTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATA                                                                                                                                                       >  2:819885/1‑149       TCAGCCCAGACACTGCTATAACTCCCTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAcca                                                                                                                                                    >  2:544229/1‑146                    TGCTATAACTCCCTGACATTGCCAGCGCAATTCACCACGGACGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTGTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCGACACTGCTATGGG                                                                                                                                       <  1:268218/149‑1                    TGCTATAACTCCCTGACATTGCCAGCGCAATGCACCACGGAATAATCCGTAATCGATCACGAGACTGGTCCGGCATACACGTTTTAATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATCCCCCATAGCGACACTGCTAGGGG                                                                                                                                       <  2:353658/149‑1                    TGCTATAACTCCCTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAACGAGAATCGTCAGGCATACACGTTTTTCTCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCGACACTGCTATGGG                                                                                                                                       <  2:349617/149‑1                    TGCTATAACTCCCTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCGACACTGCTATGGG                                                                                                                                       <  1:406942/149‑1                                                                                GAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCGACACTGCTATGGGGTATTTAAATGGATTTTG                                                                                                                     >  1:203277/1‑107                                                                                GAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGCGACACTGCTATGGGGTATTTAAATGGATTTTG                                                                                                                     <  2:203277/107‑1                                                                                                                                                  CCCCATAGCGACACTGCTATGGGGTATTTAAATGGATTTTGACCGAACAAGAATAAAAACGGATAAAAACGTGTATGCCTGACCATTCTCTTTTTCGATTACGGATTCTTACGTGGTGCATTGCGCTGGCAATGTCAGTGAGTTATAGa         >  1:12326/1‑148                                                                                                                                                     aATATCGACACTGCTATGGGGTATTTAAATGTATTTTGACCGAACAAGAATAAAAACGGATAAAAACGTGTATGCCTGACCATTCTCTTTTTCGATTACGGATTCTTCCGTGGTGCATTGCGCTGGCAATGTCAGGGAGTTATAGCAGT      <  1:221553/148‑1                                                                                                                                                         GCGACACTGCTATGGGGTATTTAAATGGATTTTGACCGAACAAGAATAAAAACGGATAAAAACGAGTATGCCTGACCATTCTCTTTTTCGATTACGGATTCTTCAGTGGTGCATTGCGCTGGCAATGTCAGGGACTTATAGCAGTGTCg  >  2:700046/1‑148                                                                                                                                                                                                                                                                                                               TCGTCTTCAGCCCAGACACTGCTATAACTCCCTGACATTGCCAGCGCAATGCACCACGGAAGAATCCGTAATCGAAAAAGAGAATGGTCAGGCATACACGTTTTTATCCGTTTTTATTCTTGTTCGGTCAAAATCCATTTAAATACCCCATAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2454907‑2455060 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccatagcGACACTGCTATGGGGTATTTAAATGGATTTTGACCGAACAAGAATAAAAACGGATAAAAACGTGTATGCCTGACCATTCTCTTTTTCGATTACGGATTCTTCCGTGGTGCATTGCGCTGGCAATGTCAGGGAGTTATAGCAGTGTCT  <  NC_000913/2455066‑2454920

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.