New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3605170 =	79 (1.330)	5 (0.090)	5/254	NT	6.6%	coding (192/270 nt)	yhhL	DUF1145 family protein
	?	NC_000913	3605202 =	69 (1.270)					coding (224/270 nt)	yhhL	DUF1145 family protein

CACGCCCTGACAGTGGGCGATAAAGGTACGCTGAGCTATAAAGGAACGCGCTTTGTCAGCTTTGTAGGCGAACAATAAGGTTATTTTTTAACTTTAAATTTCTTCTGCCAGGCCAGCAGTTCAAACACGCCGAAAAGGAAAATCCGTACCTTTTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3605328‑3605170 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttttcggcgTGTTTGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGCTGGGCGTCGAGG  >  NC_000913/3605202‑3605347                                                                                                                                                                                                                                                                                                                   CACGCCCTGACAGTGGGCGATAAAGGTACGCTGAGCTATAAAGGAACGCGCTTTGTCAGCTTTGTAGGCGAACAATAAGGTTATTTTTTAACTTTAAATTTCTTCTGCCAGGCCAGCAGTTCAAACACGCCGAAAAGGAAAATCCGTAC                                                                                                                                                              >  1:977470/1‑149      CCTGACAGTGGGCGATAAAGGTACGCTGAGCTATAAGGGAACGCGCTTTGTCAGCTTTGTAGGCGAACAATAAGGTTATTTTTTAACTTTAAATTTCTTCTGCCAGGCCAGCAGTTCAAACACGCCGAAAAGTAAAATCCGTACCTTTT                                                                                                                                                         >  1:52401/1‑149                                                             TTTGTAGGCGAACAATAACGTTATTTTTTAACTTTAAATTTCTTCTGCCAGGCCAGCAGTTCAAACACGCCGAAAAGGAAAATCCGTACCTTTTCGGCGTGTTTGAACTGCTGGCCTGGCAGAAGAAATTAAAAGTTAAAAAATAACCT                                                                                                  <  2:511905/149‑1                                                                                                              AGGCCAGCAGTTCAAACACGCCGAAAAGGAAAATCCGTACCTTTTCGGCGTGTTTGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCG                                                 >  2:292221/1‑149                                                                                                                          CAAACACGCCGAAAAGGAAAATCCGTACCTTTTCGGCGTGTTTGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAACTGACAAAGCGCGTTCGTTTATAGCTCAGCGTTCCTTTATCGC                                     >  1:843392/1‑149                                                                                                                                 GCCGAAAAGGAAAATCCGTACCTTTTCGGCGTGTTTGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTTTAGCTCAGCGTACCTTTATCGCGCACTGT                              >  2:41322/1‑149                                                                                                                                   CGAAAAGGAAAATCCGTACCTTTTCGGCGTGTTTGAACTGCTGGCCTGGCAGAAGAAATTTTAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCA                            >  1:1000498/1‑149                                                                                                                                                     CCTTTTCGGCGTGTTTGAAATGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGCTGGG          <  2:204966/149‑1                                                                                                                                                     CCTTTTCGGCGTGTTAGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCATTATAGCTCAGCGTACCTTTATCTCCCACTGTCAGGGCGTGGTACTGCTGGG          >  1:593670/1‑149                                                                                                                                                      CTTTTCGGCGTGTTTGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGCTGGGC         >  1:832884/1‑149                                                                                                                                                      CTTTTCGGCGTGTTTGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGCTGGGC         >  1:999131/1‑149                                                                                                                                                       TTTTCGGCGTGTTTGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAACGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGCGGGGCG        >  2:685356/1‑149                                                                                                                                                       TTTTCGGCGTGTTTGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGAGTTCCTTTATAGCTCAGCGTACCTTTATCGCCAACTGTCAGGGCGTGGGACTGCTGGGCG        >  1:562672/1‑149                                                                                                                                                          TCGGCGTGTTTGAACTGCTGGCCTGGCCGAAGAAATTTACAGTTAAAAAATAACCTAATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGCTGGGCGTCG     <  2:867049/149‑1                                                                                                                                                          TCGGCGTGATTGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGCTGGGCGTCG     <  1:980624/149‑1                                                                                                                                                             GCGTGTTTGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGCTGGGCGTCGAGG  >  2:411936/1‑149                                                                                                                                                                                                                                                                                                                   CACGCCCTGACAGTGGGCGATAAAGGTACGCTGAGCTATAAAGGAACGCGCTTTGTCAGCTTTGTAGGCGAACAATAAGGTTATTTTTTAACTTTAAATTTCTTCTGCCAGGCCAGCAGTTCAAACACGCCGAAAAGGAAAATCCGTACCTTTTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3605328‑3605170 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttttcggcgTGTTTGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAACCTTATTGTTCGCCTACAAAGCTGACAAAGCGCGTTCCTTTATAGCTCAGCGTACCTTTATCGCCCACTGTCAGGGCGTGGTACTGCTGGGCGTCGAGG  >  NC_000913/3605202‑3605347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.