| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,732,136 | A→C | 5.6% | intergenic (+13/‑65) | xylF → / → xylG | D‑xylose transporter subunit/D‑xylose ABC transporter dual domain ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,732,136 | 0 | A | C | 5.6% | 264.4 / 3.9 | 109 | intergenic (+13/‑65) | xylF/xylG | D‑xylose transporter subunit/D‑xylose ABC transporter dual domain ATPase |
| Reads supporting (aligned to +/- strand): ref base A (46/54); new base C (2/5); total (48/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.88e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
CAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAA > NC_000913/3731990‑3732283 | cAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAgc > 1:51745/1‑149 (MQ=255) aaaaGCAGATACCACACTGAATAATGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAgcg > 1:439589/1‑149 (MQ=255) ccACACTGAATATTGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCggggg > 2:599550/1‑149 (MQ=255) cacaCTGAATAATGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCCGCTCCGCGCTGGGGc < 1:388466/149‑1 (MQ=255) cacaCTGAATAATGGCCTGAAAGATGGCCCCTCCCTCCTCCTGACACCGATCGATGTGAATAAATACATCTTGAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCCGCTCCGCGCTGGGGc < 1:563240/149‑1 (MQ=255) acTGAATAATGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGAAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTg < 2:721011/149‑1 (MQ=255) cTGAATAATGGCCTGACAGATCTCCCCACCCGCCACCTGACACCGATCGATGCGAATAAAAACAACCTCAAAGATCCGGAAAGTAAAGACGGAGTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGa < 1:388668/149‑1 (MQ=255) tGAATAATGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTTAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCCGCTCCGCGCTGGGGCGtaac < 2:685315/149‑4 (MQ=255) tGAATAATGGCCTGAAAGATGACCCCTCCCGCCACCTGACCCCGATCGATGTGAATAAAAACAACATCAAAGATACGGTACTTAAAGACGGATTCCACAAACAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGAt < 1:355898/149‑1 (MQ=255) aataatGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTCAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGTGTGAttt > 2:673946/1‑149 (MQ=255) taatGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGAGAATAAAAACAACATCAACGATACGGTACTTAAAGACGGATTCCTCAACGAGATCGAGCTGTAAGCGTCACGCCCCCGCTTCGCGCTGGGGCGtaacgctt < 2:766305/149‑8 (MQ=255) aatGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACACCATCAAAGATAGGGTAATTAAAGACGGATTCCACAAAGAGCGCGCGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTtctc < 2:349186/149‑1 (MQ=255) atGGCCTGACAGATGCCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAACAACAACATCAAAGATACGCTAATTAAAGACGGAGTCCACAAAGCGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTtctct < 1:742848/149‑1 (MQ=255) tGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGTGGAGCGGGGGCGTGATTtctctc > 1:344904/1‑149 (MQ=255) aaaGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCcg > 1:350878/1‑149 (MQ=255) aaaGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGAGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCcg > 2:520577/1‑149 (MQ=255) atgATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATCCGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCcgc < 1:142807/147‑1 (MQ=255) aaGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTACTTAAAGACGGATTCCACAACGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCcgc < 1:277609/149‑1 (MQ=255) aGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCcgcg < 1:919202/149‑1 (MQ=255) aTGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGtg < 1:484642/149‑1 (MQ=255) gTCCCCTCCCGCCTCCTGACACCGTTCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGTCGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGtgaa < 2:377946/149‑1 (MQ=255) tCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCTAAGATACGGTAATTAAAGACGGATTCCACACAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGtgaat < 2:472990/149‑1 (MQ=255) tCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGtgaat < 1:599550/149‑1 (MQ=255) ccccTCCCGCCTCCTGCCACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCAAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGtgaatg > 1:78066/1‑149 (MQ=255) cTCCCGCCTCCTGCCACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGCCGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTgaatgaat < 1:872880/149‑1 (MQ=255) cTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTgaatgaat > 2:973129/1‑149 (MQ=255) tCCCGCCTCCTCACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACCGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGGGATTTCTCTCCATGCCGCGTGAATGAAtt > 1:29874/1‑149 (MQ=255) cctGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAACGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAgg < 1:42003/149‑1 (MQ=255) cctGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAgg < 2:898587/149‑1 (MQ=255) cctGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAgg < 1:45940/149‑1 (MQ=255) ctGAAACCGAGCGATGTGAATAAAAACAACATCAAAGATACGGTAATACAAGACGGATTCCACAACGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGt < 2:1014081/149‑1 (MQ=255) tGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTg < 2:136018/149‑1 (MQ=255) tGACACCGAGCGATGTGAATAAAACCAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCGTAGGTg < 2:532836/149‑1 (MQ=255) acacCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGa > 1:541321/1‑149 (MQ=255) acacCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGa > 1:858210/1‑149 (MQ=255) cacCGATCGATGTGAATAAAAACAACATCAAAGATACGGGAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGac < 2:384643/149‑2 (MQ=255) acCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCTTGAATGAATTGGCTTAGGTGGAGt > 2:956191/1‑149 (MQ=255) cgagcgatGAGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCg < 1:879355/149‑1 (MQ=255) atgccaaTCAACACAACCTCAAAGATACCGTACTTAAAGCCGGATTCCACAAAGAGAGCGAGCTGTCAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGc < 1:166616/144‑1 (MQ=255) agctgAATAAAAACAACATCAAAGATACCGAAATTAAAGACGGATTCCCCAAAGAGAGCGAGCTGTACGCGATACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGc < 1:354843/146‑1 (MQ=255) tgtgAATAAAAACAACATCAAAGATACGGTAATTAAACACGGATTCCACAAAGAGAGCTAGCTGTATGCGTTAGGCCCCTGCGCTGAGGGGGGGCGTGTTTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATggc < 1:328933/149‑3 (MQ=255) gtgAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCt > 2:849508/1‑149 (MQ=255) ggAATAAAAACAACCTGATCGATACGGCAATAAACGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCCGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAAATGGCTTAGGTGGAGTCGTTATGCCtt < 2:3803/148‑1 (MQ=255) gAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGTTTCCACAAAGAGAGCGCGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGCGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTa > 1:476689/1‑149 (MQ=255) gAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTa > 1:506686/1‑149 (MQ=255) gAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTa > 1:382692/1‑149 (MQ=255) gAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCACAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGCATTGGCTTAGGTGGAGTCGTTATGCCTTa > 1:215977/1‑149 (MQ=255) gAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGAAAGCGTTACGCACAATCGCGTAGCCGGGGCGTGATTTCTCTCCCTGCCTCGTAAATTAATAGGATGAGCTGGAGTCTTTATGCATTa > 1:467079/1‑149 (MQ=255) gAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATT‑CACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTAt > 1:134954/1‑149 (MQ=255) aaTAAAAACATCATCAAAGATCGGGTAATTAAAGACGGATTCAACAAAGAGATCGAGCTGTAAGTGTTAAGCCCCAGCGCGGTGCGGGTGAGTGATTTCTCTCCTTGCCGCGTGATTGAATTGGATTAGGTGGAGTCGTTATGCCTTAt < 2:950242/149‑1 (MQ=255) aaTAAAAACAACATCACAGATACGGTATTTAACCACGGATTCCACAAAGAGAGCGAGCTGTAAGCGGTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCAAGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTAt < 2:772241/149‑1 (MQ=255) aaTAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTAt > 1:757899/1‑149 (MQ=255) aaTAAAAACAACATAAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGAAAGCGTTACGCCCCCGCGCGGTGCGGGGGCGTGATTTCTCTGCCTGCCGCGTGTATGAATTGGCTTAGGTGGAGTCGTTATGCATTAt > 2:868498/1‑149 (MQ=255) tAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCt > 1:113138/1‑149 (MQ=255) tAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCt < 1:120382/149‑1 (MQ=255) aaaCAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCGTATCTACt > 1:881728/1‑149 (MQ=255) aacaacTTCAAAGAAACGGAAATTAAAGTCGGAATCCACAAAGAGTCCGCTCAGTAAGCGTTACGCCCCATCGCGGCGGGGGGGCGTGATTTCTCTCCATCCCGCGAGAATGAATTGGCTTAGGTGGAGGCGTTATGCCTTATCTACtt < 1:903686/149‑1 (MQ=255) aacaacATCAAAGTTACGGTAATTAAAGACGGTTTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGAGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACtt < 1:160100/149‑1 (MQ=255) aacaacATCAAAGATACGGTAATTAAAGACGGATTCCTCAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCTGGGGCGTGATTTCACTACATGCCGCGTGAATCAATTGGCTTAGGTGGAGGGGTTATGCCTTATCTAcct > 1:699997/1‑147 (MQ=255) caacaTCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGATCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGa < 2:597477/149‑1 (MQ=255) tCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGATCTGTAAGCGTTACGCCCCAGCGCGGATCGGGGGCGTGATTTCTCTCCCTGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTCATATga > 2:64224/1‑149 (MQ=255) tCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATga < 1:829220/149‑1 (MQ=255) tCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATga < 1:869979/149‑1 (MQ=255) cAAAGATACGGTCATTAAAGACGGATTCCACATAGATAGCGATCTGTAAGCGTTACGCCACAGCGCGGAGCGGGGGCGTGATTTCTCTCCATCCCGCGTGAATTTAATGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATgaa < 1:775745/149‑1 (MQ=255) cAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATgaa < 2:433854/149‑1 (MQ=255) aaaGATACGGTTATTAAAGACGGATTCCACAAAGAGAGAGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATgaag < 2:143940/149‑1 (MQ=255) aaGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATgaaga > 2:371047/1‑149 (MQ=255) aGATACGGAAATAAAAGCCGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGTTTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATgaagaa < 1:256325/149‑1 (MQ=255) gTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTAcc > 1:805284/1‑149 (MQ=255) aTTAAAGACGTATTCCACATAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGAGTGATTTCTCTACATGACGCGTTATTGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCaaa < 1:73433/149‑1 (MQ=255) aTTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGGAATGCCTTATCTACTTGAAATGAAGAACATTACCaaa < 1:972790/149‑1 (MQ=255) aaaGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAAcc > 1:196970/1‑149 (MQ=255) aGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGGGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCtt > 2:485190/1‑149 (MQ=255) aCGGATTCCACCAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAATAACATTACCAAAACCATCg < 2:912597/149‑1 (MQ=255) cGGATTCCACAATGAGCGCGAGCTGTACGCGTTACTCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCgg < 1:695117/149‑1 (MQ=255) cGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCgg < 2:123654/149‑1 (MQ=255) cGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGACCCAGCGCGGAGCGGGGGTGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCgg < 1:673946/149‑1 (MQ=255) ggATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCATCGGc > 2:845002/1‑149 (MQ=255) ttCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCCTGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAgt > 1:450837/1‑149 (MQ=255) cacaAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGCTTTCTCTCCATGCGGCGTGATTGAATTGGCTTAGGTGGCGGCGTTATGCCTTATCTACTTGAAATGAATAACATTACCAAAACCTTCGGCAGtgtg > 2:814761/1‑149 (MQ=255) aaGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGTGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAgg < 2:344904/149‑1 (MQ=255) agagagCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTTTGCCTTATCTACTTGATATGAAGAACATTACCAAACCCTTCGGCAGTGTGAAggg > 1:739282/1‑148 (MQ=255) tgagcgagcTGTATGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTTAATTAATTGGATTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTTTGAAGGCGa < 2:455336/148‑1 (MQ=255) agcgagcTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGAtt < 1:943099/149‑1 (MQ=255) cgagcTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTGATGTACTTGAAATGAAGAGCATTACCAAAACCTTCGGCAGTGTGAAGGCGCTTGa > 1:708976/1‑149 (MQ=255) cTGTAAGCGTTACGCCCCAGCGCGGCGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAAc > 1:126083/1‑149 (MQ=255) tGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCCCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTAATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACg < 2:577110/149‑1 (MQ=255) aaGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGAGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCt < 1:332288/149‑1 (MQ=255) aGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTg > 1:788338/1‑149 (MQ=255) aGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAAATGGCTTAGGGGGAGTCGTTATGCCTTATGTACTTGAAATGATGAACATTACCAAAACCTTCGGCAGTGTGCAGGCGATTGATAACGTCTg > 1:312662/1‑149 (MQ=255) gCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGc < 2:858210/149‑1 (MQ=255) ttACGCCCAAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTAAGGTGTAGGCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAAAGTCTGCTTg > 2:252964/1‑149 (MQ=255) caCGCCCCCGCTCCGCGCTGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTTCTTGc > 2:975177/2‑149 (MQ=255) aCGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGTAATGAAGAACATTACCGAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCg > 1:707936/1‑149 (MQ=255) aCGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAAGGAATTGGCTTAGGGGGCGGCGTTATGCCTTATCTCCTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCg < 1:668487/149‑1 (MQ=255) cGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCATAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTATGCATGCgg > 1:53555/1‑149 (MQ=255) gCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTGTGCTTGCGGt > 2:235474/1‑149 (MQ=255) gCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATCAAATGGCTTAGGTGCAGTCGTTATGCCATATCTACTTGCAATGAAGAACATTACCAAAACATTCGGCAGTGAGAAGGCGATTGATAACGTCTGCTTGCGGt > 2:1894/1‑149 (MQ=255) cAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGaa < 2:419540/149‑1 (MQ=255) cAGCGCGGAGCGGGGGCGTGATTTCTCTCAATGCAGCCTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACATTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCTGTTGaa > 1:608101/1‑149 (MQ=255) | CAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAAGCGTTACGCCCCAGCGCGGAGCGGGGGCGTGATTTCTCTCCATGCCGCGTGAATGAATTGGCTTAGGTGGAGTCGTTATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAA > NC_000913/3731990‑3732283 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |