| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 163,419 | A→T | 9.9% | I439F (ATT→TTT) | hrpB → | putative ATP‑dependent helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 163,419 | 0 | A | T | 9.9% | 165.1 / 9.4 | 71 | I439F (ATT→TTT) | hrpB | putative ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): ref base A (32/32); new base T (3/4); total (35/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.17e-01 | |||||||||||
GTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGCAGACAGTTCGC > NC_000913/163276‑163563 | gTCTGTTACAAATGCTGGGGGAACTGGATGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTgcc < 2:583933/149‑1 (MQ=255) tCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTgccg > 2:557189/1‑149 (MQ=255) cTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTgccgc < 1:426343/149‑1 (MQ=255) tGTCACAAATGCCGGGGGCACTGGAGGGGGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCACCGCGGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAATTTTTgccgcg < 2:580386/149‑2 (MQ=255) gTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGAGCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAATTTTTgccgcgg < 1:504024/149‑3 (MQ=255) gTTACAAAGGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCa < 1:51926/149‑1 (MQ=255) aacacATGCTGGGGGCACGGGAGGGGGACCGGCGTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGCTCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAATTTTTgccgcggta < 1:791762/148‑5 (MQ=255) aaaTGCTGGGGGGACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGGTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAATTTTTgccgcggtagca < 2:552996/149‑8 (MQ=255) aaaTGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATtctc > 2:852152/1‑149 (MQ=255) attcggtgggCAATGGAGTGTGAACGGCTTATTGCGCAAGGGCAAAAACTGGCAGCGCTGCTTAACGATCCCAGTTTAGCTGCAATGCTGG‑TAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGaa < 1:214230/142‑1 (MQ=255) gCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAag > 2:511443/1‑149 (MQ=255) gCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGATGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAag > 1:939949/1‑149 (MQ=255) gCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAgccgcc > 1:788928/1‑149 (MQ=255) gAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGAt > 2:435091/1‑149 (MQ=255) aGGGGGAACGGCTTAGTGCGCAAGGGCAAAAACTGGCCGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATg < 2:739790/149‑1 (MQ=255) gggTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCAGCCACGGATgg > 1:511182/1‑149 (MQ=255) gAACGGCTTCGTGCGCAAGGGCAAAAAATGCCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGATACCGCGAAGCACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCaa < 2:549224/149‑1 (MQ=255) aaCGGCGTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTCACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAAt < 1:735730/149‑1 (MQ=255) tGCGAAAGGGCAAAAAATCGCAGCCCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCAGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTgg < 1:706537/149‑1 (MQ=255) cAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGCCGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGCTGGGCAATAGTGACCTGggcgt > 1:828298/1‑149 (MQ=255) cAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGggcgt > 1:607195/1‑149 (MQ=255) aGGGCAAAAAATGGCAGCTCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTATCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAATAGCCGCCACGGATGGGCAATAGTGACCTGggcgtgg < 2:648478/149‑1 (MQ=255) gcgCAAAAAATGGCAGCGCTGGGCACCGAGCCGCGTTTAGCGGCAATGCTGGTTAGCGCGACGAACGACGACGCAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGAGGGGCAATAGTGACCTGggcgtggc < 2:952432/147‑1 (MQ=255) aaaaaaTGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGttt > 1:987508/1‑149 (MQ=255) aaaaaaTGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGGTGCGttt > 2:210556/1‑149 (MQ=255) aataTGGCAGCGCTGCGGAACGATCCGCGATTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCGGCTACCGCGGCAAAAATTGCCGCGATTCTCGACGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTc < 1:506960/146‑1 (MQ=255) aaaaTGTCAGCGCGGTGTAACGAGCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTc < 2:929112/149‑1 (MQ=255) aaaaTGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAATGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGACATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTc > 2:901311/1‑149 (MQ=255) aaTGGCAGCGCTGGGTAACGATCCGCGGTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTcgc < 1:284230/149‑1 (MQ=255) cAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAAt > 2:878312/1‑149 (MQ=255) ggTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGATGACGAAGCTGCTACCGCGGCAAAAAATGACGCCAATATCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGTGCGTGGCGTTTTCGCGCAATCAACCAGc > 2:618139/1‑149 (MQ=255) tAACGATCCGCGTTTAGCGGCAATGCTGGGTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCt < 2:889992/149‑1 (MQ=255) gATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGgca > 2:941716/1‑149 (MQ=255) gATCCGCGCTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGGGGCGTTTTCGCGCAATCAACCAGCCTGgca < 1:599254/149‑1 (MQ=255) tCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGAGTTTTCGCGCCATCAACCAGCCTGgcagc > 1:368135/1‑149 (MQ=255) cgcgTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAGTCAACCAGCCTGGCAGCaa > 2:468749/1‑149 (MQ=255) cgcgTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCaa < 1:435091/149‑1 (MQ=255) tttAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTa > 2:786151/1‑149 (MQ=255) cGGCAATGCTGGTGAGCGCCAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAg < 1:89799/149‑1 (MQ=255) ggCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCGGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGCCCTGGGCGTGGCGTGTTCGCGCAATCAACCAGCCTGGCAGCAACGTCGTCAGc > 1:62370/1‑149 (MQ=255) aTGCTGGGTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGTATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACt < 2:888342/149‑1 (MQ=255) tGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTg > 2:739548/1‑149 (MQ=255) gCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGt < 2:656518/149‑1 (MQ=255) gCTGGTTAGCGCGAAGAACGACGACCAAGCTGCTACCGCGGCAATAATTGCCGCCATTATCGAAGAGCCGCCACGGATGGGCAATACTGCCCTCTGAGTCGCGTTTACGCGCCAGGCTCCAACCGGGCAGCACCCTCGACAGCAACGGt > 1:243290/1‑149 (MQ=255) tAGCGCGAAGAACGACGACGACGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAAc < 2:99934/149‑1 (MQ=255) gaagaaCGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTACGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGATAAAACGCGTaa > 1:50803/1‑149 (MQ=255) gaagaaCGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCACGAAGAGCCGCCACGCATGGGCAATAGTGACATCGGCGTGGCGGTTTCGCGCAAACAACCAGACAGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTaaa > 1:672179/1‑149 (MQ=255) aagaaCGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTaaa < 1:374482/149‑1 (MQ=255) aaagacgacgaAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAacgt < 1:436616/146‑1 (MQ=255) ccgaAGCTGCTACCGCGTCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGc < 1:929202/148‑1 (MQ=255) cgaAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTTGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCg > 1:264224/1‑149 (MQ=255) gaAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCgg > 1:551428/1‑149 (MQ=255) aaGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAATAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGt < 2:379230/149‑1 (MQ=255) aGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCACAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGGGGTg > 2:555787/1‑149 (MQ=255) gctgctACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGa < 1:453325/149‑1 (MQ=255) tgctACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAgg < 2:281827/149‑1 (MQ=255) gctACCGCGGCAAAAATAGCCGCCATTCTCGAAGAGCCGCCACGGACGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGc < 1:76619/149‑1 (MQ=255) ctACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGCa < 2:52480/149‑1 (MQ=255) tACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTACAACGCTTAAACGTACGTGGCGGTGAGGCAg > 2:977825/1‑149 (MQ=255) aCCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGCAGa < 1:852152/149‑1 (MQ=255) aCCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGCAGa < 2:607195/149‑1 (MQ=255) tggcgGCAATTTTTGCCTCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACATGGGCGTGGCGTTTTCGCGCAATCAACCATCCTGGCAGAAACGTAGGCAGCAACTGTTAAAACGCTGAAACGTACGTGGCGGTCAGGCAGAc > 2:705175/3‑149 (MQ=255) tggcgGCAATTTTTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCCACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGCAGAc > 1:917696/3‑149 (MQ=255) ccGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGCAGAc < 1:511443/149‑1 (MQ=255) ccGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGGGCCCTGGGCGTGGCGTTTTCGCGCAATCAACCAGGCTGGGCGGAAGGTAGTCAGCAACTGTTAAAGCGCTTAAACGTACGTGGCGGTGAGGCAgcc > 1:116720/1‑147 (MQ=255) cgcgGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTGTTCGCGCAATCACCCAGCCTGGCAGCAACGGAGTCAGCAACTGGTAAGCCGCTTACACGTCCGGGGCGGTGAGGCAGACa > 1:567128/1‑149 (MQ=255) gcgGCAATTTTTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACATGGGCGTGGCGTTTTAGCGCAATCAACCCGCCTGGCAGCAACGTAGTCACCAACAGATAAAACGCTTAAACGTAAGTAGCGGTCAGGCAGACAg > 2:787412/1‑149 (MQ=255) gCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGCAGACAGTTc > 1:877748/1‑149 (MQ=255) gCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGACATAGTGCCCTGCTCGTTGCGGGTTCGCGCAATCACGCATGCTGGCAGGAACGTAGGCCGCAACTGGTATAAAGCTTAAAACTACGTGGCGGTGAGTACGACAGtta > 2:208519/1‑148 (MQ=255) cAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATCGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGCAGACAGTTCg < 1:123755/149‑1 (MQ=255) cAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGCAGACAGTTCg > 2:649565/1‑149 (MQ=255) aaaaaTTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGCAGACAGTTCGc < 2:404483/149‑1 (MQ=255) | GTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGCAGACAGTTCGC > NC_000913/163276‑163563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |