| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 3,316,755 | G→A | R258C (CGT→TGT) | nusA ← | transcription termination/antitermination L factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 3,316,755 | 0 | G | A | 100.0% | 495.6 / NA | 137 | R258C (CGT→TGT) | nusA | transcription termination/antitermination L factor |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (79/58); total (79/58) | |||||||||||
Only 100 of 138 total aligned reads displayed.
TGGTGTGTTTATCTTCATCCACCACGATAGAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGA > NC_000913_3_pae_pgi/3316614‑3316901 | tGGTGTGTTTATCTTCATCCACCACGATAGAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACg < 4:941409/151‑1 (MQ=255)tGGTGTGTTTATCTTCATCCACCACGATAGAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTACGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACg > 3:728410/1‑151 (MQ=255) gtTTATCTTCATCCACCACGATAGAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATAcc > 1:273515/1‑151 (MQ=255) ttATCTTCATCCACCACGATCGAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTa < 2:587201/151‑1 (MQ=255) tATCTTCATCCACCACGATAGAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTAc > 1:1472100/1‑151 (MQ=255) aTCTTCATCCACCACGATAGAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACg > 4:869568/1‑151 (MQ=255) aTCTTCATCCACCACGATAGAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACg < 3:1097250/151‑1 (MQ=255) tCTTCATCCACCACGATATAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGc > 2:1292969/1‑151 (MQ=255) tCTTCATCCACCACGATAGAAGCCACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGc > 3:820401/1‑151 (MQ=255) tCTTCATCCACCACGATAGAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGc > 2:363150/1‑151 (MQ=255) ttCATCCACCACGATAGAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCaa > 4:284430/1‑151 (MQ=255) caccacGATAGAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCt > 2:1319359/1‑151 (MQ=255) cGATAGAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCgg < 1:887495/151‑1 (MQ=255) gAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGa > 4:705525/1‑151 (MQ=255) aGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCCTACCTACGCAGTCCCCTACCGGATCGaga > 2:1393955/1‑149 (MQ=255) aGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATa < 2:505863/151‑1 (MQ=255) aCGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCAAGCGGACGATATCGTTACGCTCGCCCCCCAGCTCATTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGtt < 1:1582846/151‑1 (MQ=255) tCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTAt < 3:63783/151‑1 (MQ=255) ccGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGc < 1:1205703/120‑1 (MQ=255) cGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTg < 3:147288/151‑1 (MQ=255) ggTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTgg > 3:490282/1‑151 (MQ=255) ggTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTgg < 4:129032/151‑1 (MQ=255) ggTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTgg > 1:592211/1‑151 (MQ=255) cATTGCGTTAATCACGAACTGCGTCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTc > 1:1466171/1‑151 (MQ=255) aTTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCAc < 1:1210606/118‑1 (MQ=255) aTTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCAc > 2:1210606/1‑118 (MQ=255) tGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCAcc > 1:1342981/1‑151 (MQ=255) cGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACcgc < 2:1786112/151‑1 (MQ=255) gTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACcgcg > 2:967340/1‑151 (MQ=255) tAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATc > 2:26622/1‑121 (MQ=255) tAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATc < 1:26622/121‑1 (MQ=255) tAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGAt > 1:1842795/1‑151 (MQ=255) aTCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATAc < 2:1481326/124‑1 (MQ=255) aTCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGAttt > 2:1015429/1‑151 (MQ=255) cACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTc > 2:377711/1‑151 (MQ=255) cACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTc > 2:844148/1‑151 (MQ=255) aCGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCg < 2:1842795/151‑1 (MQ=255) aCGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCg > 2:752948/1‑151 (MQ=255) aaCTGCGTCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCAc < 2:1466171/151‑1 (MQ=255) gcgcCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCgg < 4:731880/106‑1 (MQ=255) gcgcCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTg < 4:309456/125‑1 (MQ=255) gcgcCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACgaga > 2:1854884/1‑151 (MQ=255) cGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGAt < 3:716908/104‑1 (MQ=255) cGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAAccc < 2:1472100/151‑1 (MQ=255) gTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGa > 4:1206336/1‑151 (MQ=255) tATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCgg < 2:1623542/148‑1 (MQ=255) tATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCgg > 1:1623542/1‑148 (MQ=255) catcCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATcgcg > 3:835973/1‑151 (MQ=255) atcCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGa > 2:1454940/1‑151 (MQ=255) cccACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGc < 3:206180/130‑1 (MQ=255) cccACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGc > 3:489933/1‑151 (MQ=255) ccACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGcc < 2:716221/151‑1 (MQ=255) caGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAg > 4:1034813/1‑77 (MQ=255) caGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAg < 3:1034813/77‑1 (MQ=255) caGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCgct > 1:1480503/1‑151 (MQ=255) ggACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCg > 2:1571646/1‑89 (MQ=255) ggACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCg < 1:1571646/89‑1 (MQ=255) ggACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGa > 4:397397/1‑143 (MQ=255) ggACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGa < 3:397397/143‑1 (MQ=255) cGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCttt < 1:1319359/151‑1 (MQ=255) gATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTa < 4:955541/151‑1 (MQ=255) tatCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAAt < 1:470015/151‑1 (MQ=255) tatCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAAt < 4:496249/151‑1 (MQ=255) tatCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAAt > 2:702753/1‑151 (MQ=255) ngATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCNCNACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTc > 1:799812/2‑151 (MQ=255) cGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTc > 1:1866502/1‑151 (MQ=255) cGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTGAATTTc > 4:731538/1‑151 (MQ=255) gATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCa < 1:421392/63‑1 (MQ=255) gATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTaa > 2:917312/1‑146 (MQ=255) tACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCa > 2:1611009/1‑65 (MQ=255) cGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGGGAACCCGGATCGGGAGCCGCTGCTTTAATTTCAATCa > 1:1019503/1‑151 (MQ=255) cGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGa > 2:1502160/1‑123 (MQ=255) cGCTCGCCACCCAGTTCAGTAGACACAGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGa < 1:1502160/123‑1 (MQ=255) gCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCAc > 1:123295/1‑151 (MQ=255) ccACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCActtctt > 4:627832/1‑151 (MQ=255) cACCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAAccc < 1:986621/113‑1 (MQ=255) aCCCAGTTCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCg > 2:1579284/1‑151 (MQ=255) tCAGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGAttt > 1:372330/1‑151 (MQ=255) aGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCg < 3:708868/58‑1 (MQ=255) aGTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCg > 4:708868/1‑58 (MQ=255) gTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCa > 3:1154080/1‑79 (MQ=255) gTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCa < 4:1154080/79‑1 (MQ=255) gTAGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAAccc < 2:868451/102‑1 (MQ=255) aGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGAtttt < 2:555242/87‑1 (MQ=255) aGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGAtttt > 1:555242/1‑87 (MQ=255) aGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGc < 1:1015429/151‑1 (MQ=255) aGACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGc < 1:752948/151‑1 (MQ=255) gACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATa > 3:889095/1‑57 (MQ=255) gACACCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATa < 4:889095/57‑1 (MQ=255) cacCGCCTGAACACACGCGCCACGCGCACCCGCGCAAACGCCTACCGGAACGATACATCTATCGATGGTTGTCACGGCAAAGTGCGCACCAGAACCCGGAGAGCTCGCCGGTGCTCTAATCACAATCACTTCTTCGCCGATTTCTGGCACt > 2:334024/1‑151 (MQ=255) cacCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACgag < 2:1044504/92‑1 (MQ=255) cacCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACgag > 1:1044504/1‑92 (MQ=255) cacCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACt > 1:895645/1‑151 (MQ=255) cacCGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACt > 2:272445/1‑151 (MQ=255) ccGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACgag < 4:666927/90‑1 (MQ=255) ccGCCTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACgag > 3:666927/1‑90 (MQ=255) ccTGAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAAt > 3:977738/1‑115 (MQ=255) gAACACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACg > 2:973036/1‑151 (MQ=255) aaCACACGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGCGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACgg > 1:772815/1‑151 (MQ=255) acacacGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGa < 4:861563/151‑1 (MQ=255) | TGGTGTGTTTATCTTCATCCACCACGATAGAAGCAACGTCTGCCGGTGCCATTGCGTTAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGA > NC_000913_3_pae_pgi/3316614‑3316901 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |