BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913_3_pae_pgi	1,195,136	T→G	V5G (GTA→GGA)	icd →	isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913_3_pae_pgi	1,195,136	0	T	G	100.0%	506.6 / NA	140	V5G (GTA→GGA)	icd	isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (76/64); total (76/64)

Only 100 of 142 total aligned reads displayed.

TAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGAAAGTGGTCGACGCTGCAGT  >  NC_000913_3_pae_pgi/1194991‑1195280

tAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAgtt                                                                                                                                              <  1:476678/150‑1 (MQ=255)

tAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAgtt                                                                                                                                              <  3:360757/150‑1 (MQ=255)

tAGGGNAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAgtt                                                                                                                                              <  3:355153/150‑1 (MQ=255)

   ggTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAgttgtt                                                                                                                                           >  1:1562127/1‑150 (MQ=255)

     tagtaTTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTcc                                                                                                                                         <  2:360635/150‑1 (MQ=255)

      agtaTTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTACAGGAGTTGTTCCg                                                                                                                                        >  4:801082/1‑150 (MQ=255)

        taTTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGc                                                                                                                                      >  1:1554086/1‑150 (MQ=255)

              cAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAgg                                                                                                                                <  2:1276945/150‑1 (MQ=255)

                    aaTTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCaagaa                                                                                                                          >  1:106187/1‑150 (MQ=255)

                         cAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCa                                                                                                                     <  1:458379/150‑1 (MQ=255)

                             tCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCt                                                                                                                 <  2:56680/150‑1 (MQ=255)

                               aTTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGc                                                                                                               >  1:861881/1‑150 (MQ=255)

                                 tAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCaa                                                                                                             <  4:322441/150‑1 (MQ=255)

                                    cAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCCCAAGGCAAGAAGATCACCCTGCAAAAc                                                                                                          >  2:472456/1‑150 (MQ=255)

                                    cAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAAc                                                                                                          >  1:204592/1‑150 (MQ=255)

                                     aaaaaaTTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGGGAATGGGAAGTAAAGGGGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACg                                                                                                         >  4:5486/1‑150 (MQ=255)

                                       aaaaTTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGc                                                                                                       >  1:1405094/1‑150 (MQ=255)

                                          aTTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCaaa                                                                                                    <  2:1206137/150‑1 (MQ=255)

                                              ctctAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCa                                                                                                >  4:511610/1‑150 (MQ=255)

                                               tctAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCaa                                                                                               <  2:1257952/150‑1 (MQ=255)

                                               tctAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCaa                                                                                               >  2:1434951/1‑150 (MQ=255)

                                               tctAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCaa                                                                                               >  1:1291655/1‑150 (MQ=255)

                                                 tAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCaag                                                                                                                            <  4:548536/119‑1 (MQ=255)

                                                 tAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCaag                                                                                                                            >  3:548536/1‑119 (MQ=255)

                                                 tAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGc                                                                                                       <  4:7070/140‑1 (MQ=255)

                                                 tAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACg                                                                                             >  3:617408/1‑150 (MQ=255)

                                                 tAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACg                                                                                             >  1:1293220/1‑150 (MQ=255)

                                                 tAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACg                                                                                             >  1:1211724/1‑150 (MQ=255)

                                                 tAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACg                                                                                             >  1:792699/1‑150 (MQ=255)

                                                     gCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAgg                                                                                                                                <  1:404070/111‑1 (MQ=255)

                                                     gCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAgg                                                                                                                                >  2:404070/1‑111 (MQ=255)

                                                     gCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTcc                                                                                         >  1:50639/1‑150 (MQ=255)

                                                      cATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCt                                                                                        <  2:50639/150‑1 (MQ=255)

                                                      cATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCt                                                                                        >  3:262691/1‑150 (MQ=255)

                                                      cATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCt                                                                                        <  4:783226/150‑1 (MQ=255)

                                                      cATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCt                                                                                        >  4:895327/1‑150 (MQ=255)

                                                       aTCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTg                                                                                       >  1:306341/1‑150 (MQ=255)

                                                        tCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCt                                                                                                                 >  4:417944/1‑123 (MQ=255)

                                                        tCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCt                                                                                                                 <  3:417944/123‑1 (MQ=255)

                                                        tCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGa                                                                                      <  1:394945/150‑1 (MQ=255)

                                                         ccGTATCGCAGGACGCAAACGCATATGCAAAGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGaa                                                                                     >  3:484102/1‑150 (MQ=255)

                                                          cGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGaaa                                                                                    <  2:1019309/150‑1 (MQ=255)

                                                              tCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATcc                                                                                <  4:450832/150‑1 (MQ=255)

                                                               cGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCg                                                                               <  3:895327/150‑1 (MQ=255)

                                                                gCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGa                                                                              <  2:1563267/150‑1 (MQ=255)

                                                                gCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGa                                                                              <  3:502327/150‑1 (MQ=255)

                                                                gCAGGACGCAAACGCATATGCAACGTGGCGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGa                                                                              <  1:1393352/150‑1 (MQ=255)

                                                                 cAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCaa                                                                                                                             >  1:1464603/1‑102 (MQ=255)

                                                                     aCGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATc                                                                         <  2:1554086/150‑1 (MQ=255)

                                                                           aCGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTAc                                                                   >  1:196710/1‑150 (MQ=255)

                                                                             gCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACAt                                                                 >  4:611677/1‑150 (MQ=255)

                                                                               atatGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCAcc                                                                                                                   <  3:60864/98‑1 (MQ=255)

                                                                                 atGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCaaa                                                                                                    <  1:1593986/111‑1 (MQ=255)

                                                                                 atGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGaa                                                             <  2:106187/150‑1 (MQ=255)

                                                                                 atGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGaa                                                             <  2:255838/150‑1 (MQ=255)

                                                                                   gCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAagaaga                                                                                                                        <  3:1946/89‑1 (MQ=255)

                                                                                   gCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAagaaga                                                                                                                        >  4:1946/1‑89 (MQ=255)

                                                                                    cAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTc                                                                                          >  2:327662/1‑118 (MQ=255)

                                                                                    cAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTc                                                                                          <  1:327662/118‑1 (MQ=255)

                                                                                      aCGTGGTGGCAGACGGGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGa                                                        <  2:881247/150‑1 (MQ=255)

                                                                                          ggtggCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGa                                                    <  2:1562127/150‑1 (MQ=255)

                                                                                            tggAAGACGAGGAAACCAGTAGCGCTAGAAGGAGATGTGAATCGAAAGTAAAGGAGGTGTTCCGGCACAAGCCAACAAGATCCCCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAAt                                                  <  4:289236/150‑1 (MQ=255)

                                                                                             ggCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATc                                                 >  4:711380/1‑150 (MQ=255)

                                                                                              gCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCg                                                <  2:500903/150‑1 (MQ=255)

                                                                                                aGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGgt                                              <  4:520468/150‑1 (MQ=255)

                                                                                                 gACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAAc                                                                                              <  2:1586988/101‑1 (MQ=255)

                                                                                                 gACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAAc                                                                                              >  1:1586988/1‑101 (MQ=255)

                                                                                                   cGAGCAAACCAGTAGCGCCCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTa                                           <  3:511610/150‑1 (MQ=255)

                                                                                                    gAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATc                                                                                                                      <  2:1162734/74‑1 (MQ=255)

                                                                                                    gAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATc                                                                                                                      >  1:1162734/1‑74 (MQ=255)

                                                                                                      gCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGAt                                        >  4:830628/1‑150 (MQ=255)

                                                                                                       cAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGc                                                                                                                               <  2:446885/62‑1 (MQ=255)

                                                                                                       cAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAg                                                            <  4:626915/129‑1 (MQ=255)

                                                                                                       cAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATg                                       >  2:179704/1‑150 (MQ=255)

                                                                                                        aaaCCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGt                                      >  2:695918/1‑150 (MQ=255)

                                                                                                         aaCCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTa                                     >  4:679699/1‑150 (MQ=255)

                                                                                                           ccAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAAc                                   <  2:1436750/150‑1 (MQ=255)

                                                                                                            cAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAAcc                                  >  3:294195/1‑150 (MQ=255)

                                                                                                               tAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCa                               <  3:679699/150‑1 (MQ=255)

                                                                                                                aGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAg                              >  1:556752/1‑150 (MQ=255)

                                                                                                                 gcgcTCGAAGGAGAGGCGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACACCAGc                             >  2:365731/1‑150 (MQ=255)

                                                                                                                    cTCGAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCAt                          <  2:878363/150‑1 (MQ=255)

                                                                                                                      cGAAGGAGAGGGGAATGGAAAGTAAATGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGc                        >  2:229034/1‑150 (MQ=255)

                                                                                                                       gAAGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCt                       >  1:1238650/1‑150 (MQ=255)

                                                                                                                        aaGGAGAGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTg                      <  4:347360/150‑1 (MQ=255)

                                                                                                                           gagaGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGaaa                   >  1:104080/1‑150 (MQ=255)

                                                                                                                           gagaGGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGa                     <  1:1216334/148‑1 (MQ=255)

                                                                                                                           gagaGGTGAATGGAAAGTAAAGGAGTTGTTCCCGCACAAGGCAAGAATATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGaaa                   <  1:594211/150‑1 (MQ=255)

                                                                                                                             gagGTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGAAAGt                 >  1:255092/1‑150 (MQ=255)

                                                                                                                                gTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCa                                                                                                >  4:105964/1‑68 (MQ=255)

                                                                                                                                gTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCa                                                                                                <  3:105964/68‑1 (MQ=255)

                                                                                                                                gTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTc                                                                                          >  2:676232/1‑74 (MQ=255)

                                                                                                                                gTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTc                                                                                          <  1:676232/74‑1 (MQ=255)

                                                                                                                                gTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGAAAGTGGt              >  2:272932/1‑150 (MQ=255)

                                                                                                                                gTGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGAAAGTGGt              >  1:1142878/1‑150 (MQ=255)

                                                                                                                                 tGAATGGAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCACCGTTCCTGAAAATCCGATTATCCCTTACCTTGAAAGTGATGGAGTCGGTGTAGATGTAACCCCAGCCATGCTGAAAGTGGTc             <  2:564780/150‑1 (MQ=255)

                                                                                                                                      ggAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGAAAGTGGTCGACGc        >  3:630510/1‑150 (MQ=255)

                                                                                                                                      ggAAAGTAAAGGAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGAAAGTGGTCGACGc        <  2:1293220/150‑1 (MQ=255)

                                                                                                                                         aagtaaaggaGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGAAAGTGGTCGACGCTGc     >  1:1085020/1‑150 (MQ=255)

                                                                                                                                            taaaggaGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGAAAGTGGTCGACGCTGCAGt  >  2:1553595/1‑150 (MQ=255)

TAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGCAAACGCATATGCAACGTGGTGGCAGACGAGCAAACCAGTAGCGCTCGAAGGAGAGGTGAATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGAAAGTGGTCGACGCTGCAGT  >  NC_000913_3_pae_pgi/1194991‑1195280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`