| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 190627 = | 111 (0.860) | 6 (0.050) | 6/232 | NT | 5.8% | intergenic (+3/+62) | cap5P/isdG1 | capsular polysaccharide biosynthesis protein Cap5P/heme‑degrading enzyme IsdG |
| ? | CP000730 | 190682 = | 94 (0.800) | intergenic (+58/+7) | cap5P/isdG1 | capsular polysaccharide biosynthesis protein Cap5P/heme‑degrading enzyme IsdG | |||||
GTTTAAAAAGTGATGACGATGGACAGCAAAGTCCAATATTATCAAATAAAGTATTCAAATATGATATTGGCTACCACTATCAAAAATAAATATATTAAAAACCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGGGGTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/190777‑190627‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggggtttttAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATACATCGGAATTCAACCAA > CP000730/190682‑190821 GTTTAAAAAGTGATGACGGTGGACAGCAAAGTCCAATATTATCAAACAAAGTATTCAAATATGATATTGGCTACCACTATCAAAAATAAATATATTAAAATCCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATT < 2:1493834/141‑1 TTTAAAAAGTGATGACGATGAACAACAAAGTCCAATATTATCAAATAAACTATTAAAATATGATATTGGCTACCACTATCAAAAATAAATATATTAAAAACCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTA < 2:355763/141‑1 TAAAAAGTGATTACGATGGACAGCAAAGTCCAATATTATCAAATAAAGTATTCAAATATGATATTGGCTACCACTATCAAAAATAAATATATTAAAAACCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGG < 2:902121/141‑1 TAAAAAGTGATGACGATGGACAGAAAAGTCCAATATTATAAAATAAAGTATTCAAATATGATATTGGCTACCACTATCAAAAATAAATATATTAAAAACCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGG < 1:15001/141‑1 AAAAAGTGATGACGATGGACAGCAAAGTCCAATATTATCAAATAAAGTATTCAAATATGATATTGGCTACCACTATCAAAAATAAATATATTAAAAACCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGGG > 2:1497430/1‑141 AAAAGTGATGACGATGGACATCAAAGTCCAATATTATCAAATAAAGTATTCAAATATGATATTGGCTACCACTATCAAAAATAAATATATTAAAAACCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGGGG < 1:433717/141‑1 AAAAGTGATGACGATGGACAGCAAAGTCCAATATTATCAAATAAAGTATTCAAATATGATATTGGCTACCACTATCAAAAATAAATATATTAAAAACCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGGGG < 2:24607/141‑1 AAAGTGATGACGATGGACAGCAAAGTCCAATATTATCAAATAAAGTATTCAAATATGATATTGGCTACCACTATCAAAAATAAATATATTAAAAACCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGGGGT > 1:877763/1‑141 AAAGTGATGACGATGGACAGCAAAGTCCAATATTATCAAATAAAGTATTCAAATATGATATTGGCTACCACTATCAAAAATAAATATATTAAAAACCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGGGGT < 2:918435/141‑1 GTGATGACGATGGACAGCAAAGTCCAATATTATCAAATAAAGTATTCAAATATGATATTGGCTACCACTATCAAAAATAAATATATTAAAAACCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGGGGTTTT < 1:561688/141‑1 GTGATGACGATGGACAGCAAAGTCCAATATTATCAAATAAAGTATTCAAATATGATATTGGCTACCAATATCCAAACTAAATATATTAACAACCTCTAGTCACCGCTGGTTGTCTCAACCAACTTCATGATTAGGGGTTTT > 1:1238550/1‑141 TGATGACGATGGACAGCAAAGTCCAATATTATCAAATAAAGTATTCAAATATGATATTGGCTACCACTATCAAAAATAAATATATTAAAAACCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGGGGTTTTT > 1:823419/1‑141 AAACCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGGGGTTTTTAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACT > 1:794238/1‑141 CCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGGGGTTTTTAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTA > 2:246704/1‑141 CTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGGGGTTTTTAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAA > 2:719106/1‑141 GTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGGGGTTTTTAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAAACG > 1:768715/1‑141 TGTCTAAACCAACTTCATGACTAGGGGTTTTTAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAAACGTACATTTTTATG > 2:52111/1‑141 TCATGATTAGGGGTTTTTAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTCGCTGTTATTGGAGCGTGCTTTTCATCGCCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATA > 1:743859/1‑141 AGGGGTTTTTAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATACATCGGAA < 2:239127/141‑1 GGGGTTTTTAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATACATCGGAAT < 1:368387/141‑1 GGTTTTTAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATACATCGGAATTC < 2:457738/141‑1 GGTTTTGAATATATTTATTTTTGATAGTGGTAGCCAATATCAGATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATACATCGGAATTC < 2:1582483/141‑1 TTTTTAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTTCTGTCCATCGTCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATACATCGGAATTCAA > 2:1508392/1‑141 TTAATATATTTATTTTTGATAGTGGTAGCCAATGTCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCAATCGTCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATACATCGGAATTCAACCA > 1:864770/1‑141 TTAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATACATCGGAATTCAACCA < 2:552981/141‑1 TTAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATACATCGGAATTCAACCA > 1:1239631/1‑141 TTAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATACATCGGAATTCAACCA < 2:919621/141‑1 TAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATACATCGGAATTCAACCAA < 1:7467/141‑1 TAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATACATCGGAATTCAACCAA < 2:1077155/141‑1 GTTTAAAAAGTGATGACGATGGACAGCAAAGTCCAATATTATCAAATAAAGTATTCAAATATGATATTGGCTACCACTATCAAAAATAAATATATTAAAAACCCCTAGTCACCGCTGGTTGTCTAAACCAACTTCATGATTAGGGGTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/190777‑190627‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggggtttttAATATATTTATTTTTGATAGTGGTAGCCAATATCATATTTGAATACTTTATTTGATAATATTGGACTTTGCTGTCCATCGTCATCACTTTTTAAACGTACATTTTTATGAGCTTCTTTAAATACATCGGAATTCAACCAA > CP000730/190682‑190821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |