BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	920377 =	100 (0.770)	4 (0.030)	4/226	NT	5.0%	coding (52/135 nt)	USA300HOU_0880	hypothetical protein
*	?	CP000730	920443 =	62 (0.540)	4 (0.030)	4/226	NT	5.0%	coding (6/99 nt)	USA300HOU_0881	hypothetical protein

Only 100 of 127 total aligned reads displayed.

CAGCAAACATCGGCGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACA  >  CP000730/920238‑920517

cagcaAACATCGGCGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCg                                                                                                                                             <  2:126946/141‑1 (MQ=255)

atatcaccaatgtcatcataccatataacttttatcataatcatttcagcgaactttagtttgatgtttttgcttgattaaaatctttcggcgatcttcagcttgatgttttcgtttgattaaattggtaaaatagaaaCg                                                                                                                                             >  2:19034‑M1/140‑141 (MQ=255)

atatcaccaatgtcatcataccatataacttttatcataatcatttcagcgaactttagtttgatgtttttgcttgattaaaatctttcggcgatcttcagcttgatgttttcgtttgattaaattggtaaaatagaaaCg                                                                                                                                             >  2:259366‑M1/140‑141 (MQ=255)

   tcaccaatgtcatcataccatataacttttatcataatcatttcagcgaactttagtttgatgtttttgcttgattaaaatctttcggcgatcttcagcttgatgttttcgtttgattaaattggcaaaatagaaaCGCaa                                                                                                                                          <  1:1372775‑M1/5‑1 (MQ=255)

    aaaCATCGGCGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAAt                                                                                                                                         <  1:593737/141‑1 (MQ=255)

    aaaCATCGGCGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAAt                                                                                                                                         <  1:1638589/141‑1 (MQ=255)

    aaaCATCGGCGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAAt                                                                                                                                         <  1:186883/141‑1 (MQ=255)

       caatgtcatcataccatataacttttatcataatcatttcagcgaactttagtttgatgtttttgcttgattaaaatctttcggcgatcttcagcttgatgttttcgtttgattaaattggtaaaatagaaaCGCAATCca                                                                                                                                      >  1:710255‑M1/133‑141 (MQ=255)

       cATCGGCGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCca                                                                                                                                      <  2:1113630/141‑1 (MQ=255)

        aTCGGCGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCcac                                                                                                                                     >  1:593647/1‑141 (MQ=255)

         tCGGCGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCcaca                                                                                                                                    >  2:444239/1‑141 (MQ=255)

           gtcatcataccatataacttttatcataatcatttcagcgaactttagtttgatgtttttgcttgattaaaatctttcggcgatcttcagcttgatgttttcgtttgattaaattggtaaaatagaaaCGCAATCCACaaa                                                                                                                                  <  1:1229155‑M1/13‑1 (MQ=255)

           gtcatcataccatataacttttatcataatcatttcagcgaactttagtttgatgtttttgcttgattaaaatctttcggcgatcttcagcttgatgttttcgtttgattaaattggtaaaatagaaaCGCAATCCACaaa                                                                                                                                  <  1:1180952‑M1/13‑1 (MQ=255)

             cGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAaag                                                                                                                                >  1:1134809/1‑141 (MQ=255)

             cGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAaag                                                                                                                                >  1:936955/1‑141 (MQ=255)

               aCAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAaagca                                                                                                                              <  1:88462/141‑1 (MQ=255)

                 aaaGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAaagcaca                                                                                                                            <  2:412295/141‑1 (MQ=255)

                  aaGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAaagcacaa                                                                                                                           >  1:262197/1‑141 (MQ=255)

                  aaGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAaagcacaa                                                                                                                           >  2:15450/1‑141 (MQ=255)

                          aTACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCAccccc                                                                                                                   >  2:636071/1‑141 (MQ=255)

                           tACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCAGCCAACACCATCATGTCCAATATAATCAATCAAACTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCa                                                                                                                  <  1:231264/141‑1 (MQ=255)

                            cttttatcataatcatttcagcgaactttagtttgatgtttttgcttgattaaaatctttcggcgatcttcagcttgatgttttcgtttgattaaattggtaaaatagaaaCGCAATCCACaa                                                                                                                                   >  2:954229‑M1/112‑123 (MQ=255)

                            cttttatcataatcatttcagcgaactttagtttgatgtttttgcttgattaaaatctttcggcgatcttcagcttgatgttttcgtttgattaaattggtaaaatagaaaCGCAATCCACaa                                                                                                                                   <  1:954229‑M1/12‑1 (MQ=255)

                            aCATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCaa                                                                                                                 >  1:120238/1‑141 (MQ=255)

                            aCATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCaa                                                                                                                 <  2:1451437/141‑1 (MQ=255)

                             cATATGTGGAGTGGACAAAGCCCGCGACTAGTAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCaaa                                                                                                                >  1:491210/1‑141 (MQ=255)

                              atatGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGGACCCCCAAAc                                                                                                               <  2:606862/141‑1 (MQ=255)

                                   tggagtggaCAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACattat                                                                                                          >  2:1341965/1‑141 (MQ=255)

                                       gtggaCAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTa                                                                                                      <  1:109704/141‑1 (MQ=255)

                                            cAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCt                                                                                                 <  2:691041/141‑1 (MQ=255)

                                             aaaGCCCGCGACTAGCAACAACGCATCCCGCCCACCCCATCCTGTCCGATATAATTAACCAACTTCAGCAGCACATTCAACATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCtt                                                                                                <  1:576151/141‑1 (MQ=255)

                                             aaaGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCtt                                                                                                <  1:1467055/141‑1 (MQ=255)

                                               aGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGc                                                                                              <  1:281374/141‑1 (MQ=255)

                                               aGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGc                                                                                              >  2:1411747/1‑141 (MQ=255)

                                               aGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGc                                                                                              <  1:1052166/141‑1 (MQ=255)

                                               aGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGc                                                                                              >  2:809118/1‑141 (MQ=255)

                                                 cccGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCa                                                                                            <  2:522593/141‑1 (MQ=255)

                                                   cgcgACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAtt                                                                                          >  2:1005254/1‑141 (MQ=255)

                                                   cgcgACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAtt                                                                                          >  1:1243422/1‑141 (MQ=255)

                                                    gcgACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAGTAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAttt                                                                                         >  2:880972/1‑141 (MQ=255)

                                                    actttagtttgatgtttttgcttgattaaaatctttcggcgatcttcagcttgatgttttcgtttgattaaattggtaaaatagaaaCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAttt                                                                                         >  1:426386‑M1/88‑141 (MQ=255)

                                                      gACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAttttt                                                                                       >  2:1250331/1‑141 (MQ=255)

                                                      gACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAttttt                                                                                       >  1:1098064/1‑141 (MQ=255)

                                                       aCTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTtg                                                                                      <  2:1438696/141‑1 (MQ=255)

                                                          aGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTgg                                                                                   <  1:1104565/141‑1 (MQ=255)

                                                           gCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGa                                                                                  >  1:541589/1‑141 (MQ=255)

                                                            caacaaCGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGAt                                                                                 >  1:38298/1‑141 (MQ=255)

                                                              atgtcGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTATTGTGGATTg                                                                               >  2:245756/5‑141 (MQ=255)

                                                                aacGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCg                                                                             <  1:1488012/141‑1 (MQ=255)

                                                                aacGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCg                                                                             <  1:113055/141‑1 (MQ=255)

                                                                  cGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGtt                                                                           <  1:715766/141‑1 (MQ=255)

                                                                  cGCATCCCGCCAACACCATCATGTCCAATATAATCAAGCAAATTAAGCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCATACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGtt                                                                           <  1:1515143/141‑1 (MQ=255)

                                                                    cATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTc                                                                         >  1:578904/1‑141 (MQ=255)

                                                                    cATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTc                                                                         >  2:601127/1‑141 (MQ=255)

                                                                    cATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTAATTTAGTGCTTGCCATTTTTGTGGATTGCGTTTc                                                                         >  2:413446/1‑141 (MQ=255)

                                                                     aTCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCt                                                                        >  1:74555/1‑141 (MQ=255)

                                                                     aTCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCt                                                                        >  2:1295414/1‑141 (MQ=255)

                                                                      tCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGCTTCTa                                                                       >  2:1154639/1‑141 (MQ=255)

                                                                        ccGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAtt                                                                     >  1:181098/1‑141 (MQ=255)

                                                                        ccGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAtt                                                                     >  1:1089285/1‑141 (MQ=255)

                                                                          gCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAtttt                                                                   >  1:1319209/1‑141 (MQ=255)

                                                                              acacCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTGGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCa                                                               >  1:1224360/1‑141 (MQ=255)

                                                                              acacCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCa                                                               >  1:1023541/1‑141 (MQ=255)

                                                                              acacCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCa                                                               >  2:384560/1‑141 (MQ=255)

                                                                              acacCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCa                                                               <  1:923792/141‑1 (MQ=255)

                                                                                acCAACATGTCCAATATAATCCATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt                                                             <  2:668904/141‑1 (MQ=255)

                                                                                      ttcggcgatcttcagcttgatgttttcgtttgattaaattggtaaaatagaaaCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGcc                                                                                             <  1:1144793‑M1/50‑1 (MQ=255)

                                                                                      ttcggcgatcttcagcttgatgttttcgtttgattaaattggtaaaatagaaaCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGcc                                                                                             >  2:1144793‑M1/54‑103 (MQ=255)

                                                                                       tGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCa                                                      <  1:607872/141‑1 (MQ=255)

                                                                                          ccAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAAc                                                   <  2:848908/141‑1 (MQ=255)

                                                                                           cAATATAATCAATCAAATTAATCAAATCATGCAATATCAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTCTTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTCTTTTACCAATTTAATCAAACg                                                  >  2:116509/1‑141 (MQ=255)

                                                                                           cAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACg                                                  >  2:64737/1‑141 (MQ=255)

                                                                                             atatAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaa                                                >  2:259572/1‑141 (MQ=255)

                                                                                                    caatcaaATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTCATCAAACGAAAACATCa                                         >  1:299434/1‑141 (MQ=255)

                                                                                                    caatcaaATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCa                                         >  2:487045/1‑141 (MQ=255)

                                                                                                           aTTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGaa                                  >  2:57721/1‑141 (MQ=255)

                                                                                                              aatcaaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGAt                               >  1:201733/1‑141 (MQ=255)

                                                                                                               atcaaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATc                              >  2:1033563/1‑141 (MQ=255)

                                                                                                                tcaaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCg                             >  1:1397764/1‑141 (MQ=255)

                                                                                                                  aaatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGcc                           <  2:51286/141‑1 (MQ=255)

                                                                                                                   aggcaggCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCGAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCg                          <  2:1552800/135‑1 (MQ=255)

                                                                                                                   aatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCg                          >  2:1406499/1‑141 (MQ=255)

                                                                                                                     tcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTTCCAATTAAATCAAACGAAAACATCAAGCTGAAGATCGCCGaa                        <  1:1427639/141‑1 (MQ=255)

                                                                                                                       aTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAg                      >  2:167936/1‑141 (MQ=255)

                                                                                                                         gCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTTTTTTTTTCTTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAt                    >  2:1280313/1‑141 (MQ=255)

                                                                                                                         gCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAt                    >  1:95699/1‑141 (MQ=255)

                                                                                                                         gCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAt                    >  1:418410/1‑141 (MQ=255)

                                                                                                                         gCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAt                    >  1:610500/1‑141 (MQ=255)

                                                                                                                           aaTATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAttt                  >  1:1008137/1‑141 (MQ=255)

                                                                                                                           aaTATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAttt                  >  1:681837/1‑141 (MQ=255)

                                                                                                                            atatAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTgg                                                                                   >  2:1362110/1‑75 (MQ=255)

                                                                                                                            atatAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTgg                                                                                   <  1:1362110/75‑1 (MQ=255)

                                                                                                                            atatAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtttt                 >  2:194310/1‑141 (MQ=255)

                                                                                                                                     atCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCa        >  1:1410120/1‑141 (MQ=255)

                                                                                                                                       cGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaa      >  1:691418/1‑141 (MQ=255)

                                                                                                                                       cGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaa      <  1:1050188/141‑1 (MQ=255)

                                                                                                                                         aCCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaaaa    >  1:1503722/1‑141 (MQ=255)

                                                                                                                                         aCCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaaaa    >  2:328450/1‑141 (MQ=255)

                                                                                                                                          ccGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAAc   >  1:763602/1‑141 (MQ=255)

                                                                                                                                           CGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACa  <  1:803470‑M1/141‑1 (MQ=255)

CAGCAAACATCGGCGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACA  >  CP000730/920238‑920517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.