BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1870532 =	146 (1.130)	8 (0.070)	6/238	NT	5.6%	intergenic (‑10/‑325)	ytmP/USA300HOU_1740	possible kanamycin kinase/hypothetical protein
*	?	CP000730	1870584 =	135 (1.120)	8 (0.070)	6/238	NT	5.6%	intergenic (‑62/‑273)	ytmP/USA300HOU_1740	possible kanamycin kinase/hypothetical protein

Only 100 of 171 total aligned reads displayed.

ATAAATGGATTTGAATTTCGTTTTAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGACTAAATTTAAATCG  >  CP000730/1870392‑1870672

tatatgtcaagtaagtgactatagaatgtatggtgtcaatgacagacattacgatttaaatttagtcgtgtaatgtaggcattggttgaggatttacaataattatctggacataatatttgtaccagtatggtgttataa                                                                                                                                                >  1:188547‑M1/141‑141 (MQ=255)

 atatgtcaagtaagtgactatagaatgtatggtgtcaatgacagacattacgatttaaatttagtcgtgtaatgtaggcattggttgaggatttacaataattatctggacataatatttgtaccagtatggtgttataaa                                                                                                                                               <  1:222191‑M1/2‑1 (MQ=255)

 atatgtcaagtaagtgactatagaatgtatggtgtcaatgacagacattacgatttaaatttagtcgtgtaatgtaggcattggttgaggatttacaataattatctggacataatatttgtaccagtatggtgttataaa                                                                                                                                               <  1:1584663‑M1/2‑1 (MQ=255)

  aaaTGGATTTGAATTTCGTTTTAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAAt                                                                                                                                              >  2:9172/1‑141 (MQ=255)

   atgtcaagtaagtgactatagaatgtatggtgtcaatgacagtcattacgatttaaatttagtcgtgtaatgtaggcattggttgaggatttacaataattatctggacataatatttgtaccagtatggtgttataAAtt                                                                                                                                             >  1:794884‑M1/138‑141 (MQ=255)

   aaTGGATTTGAATTTCGTTTTAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAAtt                                                                                                                                             >  2:558503/1‑141 (MQ=255)

     tGGATTTGAATTTCGTTTTAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAg                                                                                                                                           >  1:909120/1‑141 (MQ=255)

     gtcaagtaagtgcctatagaatgtatggtgtcaatgacagacattacgatttaaatttagtcgtgtaatgtaggcattggttgcggatttcaaataattatctggacataatatttgtaccagtatggtgttataAATTAg                                                                                                                                           <  1:72644‑M1/6‑1 (MQ=255)

      ggATTTGAATTTCGTTTTAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGa                                                                                                                                          >  2:1421534/1‑141 (MQ=255)

       caagtaagtgactatagaatgtatggtgtcaatgacagacattacgatttaaatttagtcgtgtaatgtaggcattggttgaggatttacaataattatctggacataatatttgtaccagtatggtgttataAATTAGaa                                                                                                                                         <  1:983132‑M1/8‑1 (MQ=255)

        agttGAATTTCGTTTTAAACACCACTTTTGTCCCTCTTGTTCAGCCATATATGCTTCACCAGAGGCACCACCTGCTGAATCAAGTGGCCACCCTAATTGATAAAACTGCTCCAGCGCGTCCACCTCACTTTCGATTAGaa‑a                                                                                                                                       <  2:538449/139‑1 (MQ=255)

               tttCGGTTTAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑N‑ATTGctc                                                                                                                               >  2:1242474/1‑141 (MQ=255)

                ttCGTTTTAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTAGTCTACCTCAATTTCAATTAGAA‑A‑ATGGctct                                                                                                                              >  2:587506/1‑141 (MQ=255)

                 tCGTTTTAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCTATTAGAA‑A‑ATGGCTCTa                                                                                                                             >  2:180067/1‑141 (MQ=255)

                 tCGTTTTAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCTATTAGAA‑A‑ATGGCTCTa                                                                                                                             >  2:180080/1‑141 (MQ=255)

                 tCGTTTTAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGctctt                                                                                                                             <  2:1059171/141‑2 (MQ=255)

                 tCGTTTTAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTa                                                                                                                             >  1:594377/1‑141 (MQ=255)

                    ttttAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGaa                                                                                                                          <  2:1572093/141‑1 (MQ=255)

                     tttAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGaaa                                                                                                                         >  2:1018342/1‑141 (MQ=255)

                     tttAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGaaa                                                                                                                         <  1:70788/141‑1 (MQ=255)

                      ttAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAAt                                                                                                                        <  1:1165474/141‑1 (MQ=255)

                         aaaaCAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAgg                                                                                                                     <  2:85096/141‑1 (MQ=255)

                            acaacTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTTGaaaaacctat                                                                                                                  <  1:1207346/141‑8 (MQ=255)

                             caacTTTTGTCTAACTTGTTCAGCCATATATGCTTCAACAAATGCACCACATGCTGAATCCAGTGGCCACCCTAATTGATAAAACTGCTCCAACCCGTCCACCACACTTTCAATTAGAA‑A‑ATAGCCCTAGAAATAGGtttt                                                                                                                 >  2:969761/1‑141 (MQ=255)

                             caacTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGtttt                                                                                                                 >  1:252261/1‑141 (MQ=255)

                             caacTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGtttt                                                                                                                 <  2:1435580/141‑1 (MQ=255)

                              aacTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGttttt                                                                                                                >  2:798418/1‑141 (MQ=255)

                               acTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTc                                                                                                               <  2:337143/141‑1 (MQ=255)

                                     aatgacagacattacgatttaaatttagtcgtgtaatgtaggcattggttgaggatttacaataattatctggacataatatttgtaccagtatggtgttataAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGc                                                                                                         >  2:839341‑M1/104‑141 (MQ=255)

                                       ccATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCa                                                                                                       >  1:1255640/1‑141 (MQ=255)

                                         aTCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCata                                                                                                     >  2:1080496/1‑141 (MQ=255)

                                         aTCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCata                                                                                                     <  1:424934/141‑1 (MQ=255)

                                          tCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCatat                                                                                                    >  1:662714/1‑141 (MQ=255)

                                                tCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTa                                                                                              <  1:286689/141‑1 (MQ=255)

                                                 cAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTCGAAATAGGCTTTTCAAGAGACATATATTTTaa                                                                                             >  1:1594001/1‑141 (MQ=255)

                                                  acgatttaaatttagtcgtgtaatgtaggcattggttgaggatttacaataattatctggacataatatttgtaccagtatggtgttataAATTAGAATATATGGCTCTAGAAATAGGTTTTTCAAGAGCCat                                                                                                      <  1:799667‑M1/43‑1 (MQ=255)

                                                  aGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAAt                                                                                            <  1:968656/141‑1 (MQ=255)

                                                   gCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGCAATAGGTTTTTCAAGAGCCATATATTCTAAtt                                                                                           <  2:895058/141‑1 (MQ=255)

                                                          aatttagtcgtgtaatgtaggcattggttgaggatttacaataattatctggacataatatttgtaccagtatggtgttataAATTAGAATATATGGCTCTAGAAATAGGTttttcaagagccatatatatgtacctttat                                                                                      <  1:342063‑M1/59‑13 (MQ=255)

                                                           tGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAacac                                                                                   <  1:712582/141‑1 (MQ=255)

                                                           tGCTTCACCAGATGCACCACCTGCTGAATCAAGCATCCACCCTAATTTATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTATTTCAAAAGCCATACATTCTAATTTATAacac                                                                                   >  2:936219/1‑141 (MQ=255)

                                                            gCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACAcc                                                                                  <  1:631521/141‑1 (MQ=255)

                                                             cTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCa                                                                                 <  1:1167754/141‑1 (MQ=255)

                                                             cTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCa                                                                                 >  1:560654/1‑141 (MQ=255)

                                                                  ccAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTg                                                                            >  1:1176148/1‑141 (MQ=255)

                                                                  ccAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTg                                                                            >  2:1500601/1‑141 (MQ=255)

                                                                     gATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATAGTCTAATTTATAACACCATACTGGtt                                                                         >  2:414357/1‑140 (MQ=255)

                                                                     gATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATAGTCTAATTTATAACACCATACTGGTa                                                                         >  2:1537902/1‑141 (MQ=255)

                                                                       tGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACa                                                                       >  2:818609/1‑141 (MQ=255)

                                                                       tGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACa                                                                       <  2:1352774/141‑1 (MQ=255)

                                                                        gCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACaa                                                                      >  1:1442968/1‑141 (MQ=255)

                                                                         caccacCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACaaa                                                                     <  1:250954/141‑1 (MQ=255)

                                                                         caccacCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACaaa                                                                     >  2:1578127/1‑141 (MQ=255)

                                                                           ccaccTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAata                                                                   <  1:1316643/141‑1 (MQ=255)

                                                                           ccaccTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCAACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTACTTTATAACACAATACTGGTACAAatc                                                                   >  2:325598/1‑140 (MQ=255)

                                                                                  ctgAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCTATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTc                                                            <  1:180080/141‑1 (MQ=255)

                                                                                  ctgAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGaaa                                                                                                                         <  1:528944/80‑1 (MQ=255)

                                                                                    gAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCa                                                          >  2:627482/1‑141 (MQ=255)

                                                                                    gAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCa                                                          >  1:672721/1‑141 (MQ=255)

                                                                                       tCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGAt                                                       <  2:677247/141‑1 (MQ=255)

                                                                                       tCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGAt                                                       <  2:732792/141‑1 (MQ=255)

                                                                                            tgtCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAatta                                                  <  1:1020546/141‑1 (MQ=255)

                                                                                            tgtCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAatta                                                  <  2:727773/141‑1 (MQ=255)

                                                                                            tgtCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAatta                                                  >  2:353249/1‑141 (MQ=255)

                                                                                             gtCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAattat                                                 >  1:372010/1‑141 (MQ=255)

                                                                                             gtCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAattat                                                 <  1:1522383/141‑1 (MQ=255)

                                                                                             gtCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAattat                                                 >  2:1234336/1‑141 (MQ=255)

                                                                                               ccACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTg                                               >  2:240072/1‑141 (MQ=255)

                                                                                               ccACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTg                                               <  2:10657/141‑1 (MQ=255)

                                                                                                cACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGt                                              >  2:1279499/1‑141 (MQ=255)

                                                                                                 aCCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTa                                             <  1:1130650/141‑1 (MQ=255)

                                                                                                  cccTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTaa                                            >  1:734522/1‑141 (MQ=255)

                                                                                                   ccTAATTGATAAAACTACTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTaaa                                           >  2:1216564/1‑141 (MQ=255)

                                                                                                    cTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCGTACTGGTACAAATATTATGTCCAGATAATTATTGTAAAt                                          <  2:525346/141‑1 (MQ=255)

                                                                                                      aaTTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATcc                                        >  1:1654973/1‑141 (MQ=255)

                                                                                                       aTTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCt                                       <  1:927136/141‑1 (MQ=255)

                                                                                                        ttGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTc                                      <  1:956565/141‑1 (MQ=255)

                                                                                                            tAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTATAAATAGGGTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATTTCCAGAGAATTATTGTAGATCCTCAAcc                                  >  2:576910/1‑141 (MQ=255)

                                                                                                             aaaaCTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAAt                                                                                            <  2:1181907/82‑1 (MQ=255)

                                                                                                              aaaCTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCaa                                >  1:1332402/1‑141 (MQ=255)

                                                                                                                  tGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGcc                            <  2:1254870/141‑1 (MQ=255)

                                                                                                                  tGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGcc                            <  2:777235/141‑1 (MQ=255)

                                                                                                                   gCTCCGACTCGTCCACCTGACTTTGAATTAGAA‑A‑ATGGCTCTAGAGATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTcttccggtgcct                           <  2:1110855/141‑12 (MQ=255)

                                                                                                                   gCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTTAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCt                           >  1:337074/1‑141 (MQ=255)

                                                                                                                     tCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTAc                         >  1:128005/1‑141 (MQ=255)

                                                                                                                     tCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTAc                         >  1:945830/1‑141 (MQ=255)

                                                                                                                              tCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTc                                      <  2:449421/119‑1 (MQ=255)

                                                                                                                              tCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTc                                      >  1:449421/1‑119 (MQ=255)

                                                                                                                              tCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGa                >  1:1530505/1‑141 (MQ=255)

                                                                                                                              tCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGa                <  1:347799/141‑1 (MQ=255)

                                                                                                                              tCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGa                >  1:1468291/1‑141 (MQ=255)

                                                                                                                               ccACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGAc               <  2:301478/141‑1 (MQ=255)

                                                                                                                               ccACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGAc               <  1:246658/141‑1 (MQ=255)

                                                                                                                               ccACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATACGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGAc               >  1:1194293/1‑141 (MQ=255)

                                                                                                                                cACCTCACTTTCAATTAGAA‑A‑ATGGATCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGACt              >  2:655247/1‑141 (MQ=255)

                                                                                                                                 aCCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGACTa             <  2:1185979/141‑1 (MQ=255)

                                                                                                                                       cTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGACTAAATTTa       <  1:1216564/141‑1 (MQ=255)

                                                                                                                                          tCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGACTAAATTTAAAt    >  1:1182297/1‑141 (MQ=255)

                                                                                                                                           cAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGACTAAATTTAAATc   <  1:843105/141‑1 (MQ=255)

                                                                                                                                            AATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGACTAAATTTAAATCg  >  1:720727‑M1/1‑141 (MQ=255)

ATAAATGGATTTGAATTTCGTTTTAAAAACAACTTTTGTCCATCTTGTTCAGCCATATATGCTTCACCAGATGCACCACCTGCTGAATCAAGTGTCCACCCTAATTGATAAAACTGCTCCAACTCGTCCACCTCACTTTCAATTAGAA‑A‑ATGGCTCTAGAAATAGGTTTTTCAAGAGCCATATATTCTAATTTATAACACCATACTGGTACAAATATTATGTCCAGATAATTATTGTAAATCCTCAACCAATGCCTACATTACACGACTAAATTTAAATCG  >  CP000730/1870392‑1870672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.