BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2569653 =	129 (1.000)	6 (0.050)	5/236	NT	5.0%	intergenic (+5/+87)	fmtA/USA300HOU_2430	FmtA protein/possible epimerase/dehydratase
*	?	CP000730	2569712 =	109 (0.910)	6 (0.050)	5/236	NT	5.0%	intergenic (+64/+28)	fmtA/USA300HOU_2430	FmtA protein/possible epimerase/dehydratase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 150 total aligned reads displayed.

TAGCAATAATTGGTCTTTTGTACTGACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACC  >  CP000730/2569513‑2569793

aatattatctggaccTTTTGTACTGACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATaaaa                                                                                                                                              <  1:1505435/127‑1 (MQ=255)

 attcaacctgcgcaaccatttgaacgtggcgtaagcaatgagaagtttaaagcgcaaggtggtactctgatttatcaaacttggaaagatggcatgaatccaattaaataataatttatacgtttaatatacaaagaataa                                                                                                                                             <  2:1073507‑M1/2‑1 (MQ=255)

 aGCAATAATTGGTCTTTTGTACTGACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATaaaaa                                                                                                                                             >  1:1514774/1‑141 (MQ=255)

  gCAATAATTGGTCTTTTGTACTGACTTGGCTACCAATAGAAATTACATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATaaaaaa                                                                                                                                            <  1:326510/141‑1 (MQ=255)

   tcaacctgcgcaaccatttgaacgtggcgtaagcaatgagacgtttaaagcgccaggtggtactctgatttatcaaacttggaaagatggcatgaatccaattaaataataatttatccgtttaatatacaaagaatAAAg                                                                                                                                           >  1:989854‑M1/138‑141 (MQ=255)

      taatTGGTCTTTTGTACTGACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACt                                                                                                                                        <  1:952518/141‑1 (MQ=255)

       cctgcgcaaccatttgaacgtggcgtaagcaatgagaagtttaaagcgcaaggtggtactctgatttatcaaacttggaaagatggcatgaatccaattaaataataatttatccgtttaatatacaaagaatAAAGACtt                                                                                                                                       <  1:1383933‑M1/8‑1 (MQ=255)

       aatTGGTCTTTTGTACTGACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACtt                                                                                                                                       >  1:76442/1‑141 (MQ=255)

        atTGGTCTTTTGTACTGACTTGGCTTCCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTg                                                                                                                                      >  2:1341391/1‑141 (MQ=255)

             tCTTTTGTACTGACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGa                                                                                                                                 >  1:935239/1‑141 (MQ=255)

              ttattGTACTGACTTGACTTCCAATAGAAAATAAAGTAGCACTAATCACAACATTAATTGCCTTATTCAGTAAATTAAATGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAg                                                                                                                                <  2:1576272/138‑1 (MQ=255)

                  tGTACTGACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGt                                                                                                                            >  2:860602/1‑141 (MQ=255)

                    tACTGACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTATGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGc                                                                                                                          >  1:871241/1‑141 (MQ=255)

                     aCTGACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCg                                                                                                                         <  1:1127904/141‑1 (MQ=255)

                      ctaaCTCGGCTAACAATAGCAATTAAATTAGCACTAATCACAACATTAATTGCATTATGAAGTACATTCATTTTAAATCTGTTATTCATTCATACAAAGATAACGAAGACATAATAAATAATACTTATTCGAGCCGTACGt                                                                                                                        >  2:1394162/4‑141 (MQ=255)

                      cTGACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGt                                                                                                                        <  1:1078486/141‑1 (MQ=255)

                       tGACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGtt                                                                                                                       <  1:1066916/141‑1 (MQ=255)

                       tGACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGtt                                                                                                                       <  2:552108/141‑1 (MQ=255)

                        gACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTGTTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGttt                                                                                                                      >  2:1126001/1‑141 (MQ=255)

                        gACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGttt                                                                                                                      <  1:1639751/141‑1 (MQ=255)

                        gACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGttt                                                                                                                      <  1:1334041/141‑1 (MQ=255)

                          cTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGa                                                                                                                    >  2:297522/1‑141 (MQ=255)

                          cTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGa                                                                                                                    <  2:404360/141‑1 (MQ=255)

                          cTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGa                                                                                                                    >  2:161355/1‑141 (MQ=255)

                            tGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGata                                                                                                                  <  1:1309399/141‑1 (MQ=255)

                             ggCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGataa                                                                                                                 <  1:288422/141‑1 (MQ=255)

                             ggCTACCAATAGAAATAATCATGTCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGataa                                                                                                                 <  1:434426/141‑1 (MQ=255)

                               cTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGataata                                                                                                               <  1:1305995/141‑1 (MQ=255)

                               cTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGataata                                                                                                               <  1:935914/141‑1 (MQ=255)

                                  ccAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAatatat                                                                                                            >  1:1595098/1‑141 (MQ=255)

                                  ccAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAatataa                                                                                                            >  2:576281/1‑140 (MQ=255)

                                       aGAAATTAAATTATCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATcc                                                                                                       <  2:1594743/141‑1 (MQ=255)

                                          aattaaattaGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATACTAAAAAAGACTTGTTCGAGCCGTGCGTTTGCTAATATATCAcccccc                                                                                                    >  2:1156478/1‑138 (MQ=255)

                                           attaaattaGCACTAATCACAACATTAATTGCATTATTCATTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGa                                                                                                   >  1:1470753/1‑141 (MQ=255)

                                              aaattaGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTc                                                                                                >  2:46061/1‑141 (MQ=255)

                                              aaattaGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTc                                                                                                >  1:1537697/1‑141 (MQ=255)

                                               ttaaagcgcaaggtggtactctgatttatcaaacttggaaagatggcatgaatccaattaaataataatttatccgtttaatatacaaagaatAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCg                                                                                               >  2:1167173‑M1/94‑141 (MQ=255)

                                                attaGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGCGCCGTGCGTTTGATAATATATCATCCACGATTCGa                                                                                              >  1:1308733/1‑141 (MQ=255)

                                                attaGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGa                                                                                              >  1:957466/1‑141 (MQ=255)

                                                attaGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGa                                                                                              >  1:852833/1‑141 (MQ=255)

                                                  aagcgcaaggtggtactctgatttatcaaacttggaaagatggcatgaatccaattaaataataatttatccgtttaatatacaaagaatAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGAcc                                                                                            >  1:1261061‑M1/91‑141 (MQ=255)

                                                    gCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCaa                                                                                          >  1:362361/1‑141 (MQ=255)

                                                      gcaaggtggtactctgatttatcaaacttggaaagatggcatgaatccaattaaataataatttatccgtttaatatacaaagaatAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGt                                                                                        >  2:214784‑M1/87‑141 (MQ=255)

                                                       cTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTc                                                                                       >  2:788115/1‑141 (MQ=255)

                                                        tAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCt                                                                                      <  2:1514774/141‑1 (MQ=255)

                                                         aaTCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCtt                                                                                     <  1:58576/141‑1 (MQ=255)

                                                          aTCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCttt                                                                                    >  1:1161877/1‑141 (MQ=255)

                                                           tCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTa                                                                                   <  1:417378/141‑1 (MQ=255)

                                                            cacaACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTAt                                                                                  >  2:1283086/1‑141 (MQ=255)

                                                                acaTTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTTGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCtt                                                                              <  1:843655/141‑1 (MQ=255)

                                                                acaTTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGataata                                                                                                               >  2:501154/1‑108 (MQ=255)

                                                                  aTTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTg                                                                            <  2:1249990/141‑1 (MQ=255)

                                                                   ttAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGt                                                                           >  2:1455267/1‑141 (MQ=255)

                                                                      aTTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGACGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGtata                                                                        >  1:451467/1‑141 (MQ=255)

                                                                      aTTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGtata                                                                        >  1:32782/1‑141 (MQ=255)

                                                                       ttGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTatat                                                                       >  1:1160461/1‑141 (MQ=255)

                                                                        tGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATAtt                                                                      >  2:1059266/1‑141 (MQ=255)

                                                                           attattCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATACACGATTCGACCAAGTCTTTATTCTTTGTATATTaaa                                                                   >  2:1096085/1‑141 (MQ=255)

                                                                             aaacttggaaagatggcatgaatccaattaaataataatttatccgtttaatatacaaagaatAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACg                                                                 >  1:814262‑M1/64‑141 (MQ=255)

                                                                                tCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGAt                                                              <  1:491959/141‑1 (MQ=255)

                                                                                 cAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGGTa                                                             >  2:503720/1‑141 (MQ=255)

                                                                                 cAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATa                                                             >  1:224411/1‑141 (MQ=255)

                                                                                  aGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATaa                                                            >  2:344622/1‑141 (MQ=255)

                                                                                   gTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATaaa                                                           >  1:53224/1‑141 (MQ=255)

                                                                                   gTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATaaa                                                           <  1:1094119/141‑1 (MQ=255)

                                                                                       aTTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAattat                                                       <  2:32782/141‑1 (MQ=255)

                                                                                         tAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGAGTTTGATAATATATAATAAAAGCTACATCATAGTCTTTATTCTTTGTATATTAAACGTATAAattatta                                                     >  1:1073507/1‑141 (MQ=255)

                                                                                           aTTGTAATTCTGTTATTCCTTCATACAAAGATAACGACGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAattattatt                                                   >  2:534913/1‑141 (MQ=255)

                                                                                                aaTTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGTTAAATTATTATTTAAtt                                              >  2:902462/1‑141 (MQ=255)

                                                                                                      gTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTc                                        >  1:681193/1‑141 (MQ=255)

                                                                                                        tATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCAt                                      <  1:1059266/141‑1 (MQ=255)

                                                                                                        tATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCAt                                      <  1:1341391/141‑1 (MQ=255)

                                                                                                              ttCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATc                                >  2:1624229/1‑141 (MQ=255)

                                                                                                              ttCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATc                                >  1:882013/1‑141 (MQ=255)

                                                                                                              ttCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATc                                <  1:973599/141‑1 (MQ=255)

                                                                                                                   tgtgtgATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTcc                           <  2:854937/136‑1 (MQ=255)

                                                                                                                   aCAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTcc                           <  2:1095781/141‑1 (MQ=255)

                                                                                                                   aCAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTcc                           <  1:625963/141‑1 (MQ=255)

                                                                                                                   aCAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTcc                           <  1:1455267/141‑1 (MQ=255)

                                                                                                                     aaaGATCGCGAAGACATAAGAAAAAAGACGTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTATTTGGATTCATGCCATCTTTCCaa                         <  2:319093/141‑1 (MQ=255)

                                                                                                                       aGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTCTTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATATTTCCAAGt                       >  1:1574460/1‑141 (MQ=255)

                                                                                                                       aGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGt                       <  2:781153/141‑1 (MQ=255)

                                                                                                                        gATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGtt                      <  1:365008/141‑1 (MQ=255)

                                                                                                                           aaCGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGa                   <  1:618563/141‑1 (MQ=255)

                                                                                                                            aCGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGAt                  >  2:1167451/1‑141 (MQ=255)

                                                                                                                            aCGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGAt                  >  1:647852/1‑141 (MQ=255)

                                                                                                                            aCGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGAt                  >  2:205557/1‑141 (MQ=255)

                                                                                                                              gAAGACATAATTAAAAAGACTTGTTCGAGCCGAGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTATATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAATTTGAtta                >  2:444711/1‑139 (MQ=255)

                                                                                                                               aaGACNTAATAAAAAATACTGGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTANTTGGATTCATGCCATCTTTCCAAGTTTGATaaa               <  1:236154/141‑1 (MQ=255)

                                                                                                                                aGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAAt              <  2:731046/141‑1 (MQ=255)

                                                                                                                                 gACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATc             >  1:297251/1‑141 (MQ=255)

                                                                                                                                 gACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATc             <  1:1561291/141‑1 (MQ=255)

                                                                                                                                  aCATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCa            >  1:1300251/1‑141 (MQ=255)

                                                                                                                                  aCATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCa            <  2:902284/141‑1 (MQ=255)

                                                                                                                                   cATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCag           >  1:476235/1‑141 (MQ=255)

                                                                                                                                      aataaAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGt        <  1:138742/141‑1 (MQ=255)

                                                                                                                                      aataaAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATATAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGt        >  1:42065/1‑141 (MQ=255)

                                                                                                                                       ataaAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCACGTTTGATAAATCAGAGTa       >  1:1260928/1‑141 (MQ=255)

                                                                                                                                         aaaaaaGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTacc     <  2:277441/141‑1 (MQ=255)

                                                                                                                                            AAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGGTAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTaccacc  <  1:1652866‑M1/141‑1 (MQ=255)

TAGCAATAATTGGTCTTTTGTACTGACTTGGCTACCAATAGAAATTAAATTAGCACTAATCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACC  >  CP000730/2569513‑2569793

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.