Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 2,448,498 C→T 7.5% intergenic (‑257/+20) hipO ← / ← hutI M20D subfamily peptidase/imidazolonepropionase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,448,4980CT 7.5% 492.9 / 21.2 160intergenic (‑257/+20)hipO/hutIM20D subfamily peptidase/imidazolonepropionase
Reads supporting (aligned to +/- strand):  ref base C (77/71);  new base T (8/4);  total (85/75)
Fisher's exact test for biased strand distribution p-value = 3.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.02e-01

Only 100 of 165 total aligned reads displayed.

AGACAGTTGTTTAATAATATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCATGATTTGGTGCATCCCAAATTAC  >  CP000730/2448358‑2448637
                                                                                                                                            |                                                                                                                                           
aGACAGTTTTTTAATAATATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACGACAAAAAGCTCTAAACATTAGTTTAAACCAATGc                                                                                                                                             >  2:1074582/1‑141 (MQ=255)
aGACAGTTGTTTAATAATATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGc                                                                                                                                             >  1:295722/1‑141 (MQ=255)
 gACAGTTGTTTAATAATATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATGCAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCt                                                                                                                                            >  1:490781/1‑141 (MQ=255)
 gACAGTTGTTTAATAATATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCt                                                                                                                                            >  1:376490/1‑141 (MQ=255)
 gACAGTTGTTTAATAAGATCGTAAGACTGTTGTCAAACTATTCTAACTTTTATAAATGAGCCTCTATACAAAAACGGGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAACTCTAAACATTAGTGTAAACCAATGCt                                                                                                                                            >  2:414880/1‑141 (MQ=255)
  aCAGTTGTTTAATAATATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCtt                                                                                                                                           <  2:1270021/141‑1 (MQ=255)
  aCAGTTGTTTAATAATATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCtt                                                                                                                                           <  2:1584033/141‑1 (MQ=255)
      ttgttTAATAATATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAGCATTGGTTTAAACTAATGTTTagag                                                                                                                                       <  2:683680/141‑1 (MQ=39)
         tttAATAATATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCtt                                                                                                                                    <  2:64802/141‑1 (MQ=255)
          ttAATAATATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCttt                                                                                                                                   >  1:1656236/1‑141 (MQ=255)
          ttAATAATATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCttt                                                                                                                                   <  1:1289360/141‑1 (MQ=255)
           taataaTATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTc                                                                                                                                  >  1:1492131/1‑141 (MQ=255)
            aataatATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCt                                                                                                                                 <  2:1067762/141‑1 (MQ=255)
            aataatATCGTAACACCGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCt                                                                                                                                 <  2:44741/141‑1 (MQ=255)
             ataataTCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTa                                                                                                                                >  2:1476074/1‑141 (MQ=255)
             ataataTCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTa                                                                                                                                <  2:357796/141‑1 (MQ=255)
                       aaCACTGTTGTCCAACTATTCTAACTTTTATAATTTAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTAt                                                                                                                      <  1:896182/141‑1 (MQ=255)
                       aaCACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTAt                                                                                                                      <  1:640005/141‑1 (MQ=255)
                       aaCACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTAt                                                                                                                      <  1:718903/141‑1 (MQ=255)
                         cacTGTTGTCAAACTATTCTAAGTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGc                                                                                                                    <  1:1395597/141‑1 (MQ=255)
                         cacTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGc                                                                                                                    <  2:1038959/141‑1 (MQ=255)
                             gttgtCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTGAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTa                                                                                                                <  1:877556/141‑1 (MQ=255)
                             gttgtCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTa                                                                                                                >  1:184470/1‑141 (MQ=255)
                             gttgtCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTa                                                                                                                >  1:1366123/1‑141 (MQ=255)
                                   aaaCTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGAt                                                                                                          >  2:782616/1‑141 (MQ=255)
                                   aaaCTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGAt                                                                                                          <  2:1238022/141‑1 (MQ=255)
                                   aaaCTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGAt                                                                                                          <  2:616474/141‑1 (MQ=255)
                                   aaaCTATTCTAACTTTTATAATTGAGACTCGATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGAt                                                                                                          <  1:1188545/141‑1 (MQ=255)
                                     aCTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATAc                                                                                                        >  2:899100/1‑141 (MQ=255)
                                       tATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACtg                                                                                                      <  2:168719/141‑1 (MQ=255)
                                         ttCTAACTTTTATAATTGAGACCCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTACTTATTTTCTGCTTTACAAGATACtgtg                                                                                                    >  1:1361453/1‑141 (MQ=255)
                                          tCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTgtgt                                                                                                   >  1:1418053/1‑141 (MQ=255)
                                           cTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGtt                                                                                                  <  1:586761/141‑1 (MQ=255)
                                            tAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTa                                                                                                 >  1:1488571/1‑141 (MQ=255)
                                            tAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTa                                                                                                 >  1:1561164/1‑141 (MQ=255)
                                             aaCTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTAt                                                                                                >  1:846566/1‑141 (MQ=255)
                                              aCTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATc                                                                                               <  1:592438/141‑1 (MQ=255)
                                                ttttATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTa                                                                                             >  1:1338168/1‑141 (MQ=255)
                                                  ttATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACg                                                                                           <  2:467829/141‑1 (MQ=255)
                                                  ttATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACg                                                                                           >  2:1220486/1‑141 (MQ=255)
                                                   tataATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGa                                                                                          >  1:379140/1‑141 (MQ=255)
                                                    ataATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGAt                                                                                         <  2:1369274/141‑1 (MQ=255)
                                                     taATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATg                                                                                        >  1:910516/1‑141 (MQ=255)
                                                     taATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATg                                                                                        >  1:179209/1‑141 (MQ=255)
                                                     taATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATg                                                                                        >  1:418421/1‑141 (MQ=255)
                                                     taATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATg                                                                                        >  1:1058943/1‑141 (MQ=255)
                                                         tGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCt                                                                                    >  1:800548/1‑141 (MQ=255)
                                                          ttttctctATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTTAATCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCtt                                                                                   >  2:847575/5‑141 (MQ=255)
                                                            gaCTCGATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATNACCTTAc                                                                                 >  2:1244121/1‑141 (MQ=255)
                                                             aCTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTAcc                                                                                >  1:16926/1‑141 (MQ=255)
                                                                   taCAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTc                                                                                                                                  >  2:1631245/1‑85 (MQ=255)
                                                                   taCAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCttt                                                                          >  1:113543/1‑141 (MQ=255)
                                                                   taCAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCttt                                                                          >  1:562254/1‑141 (MQ=255)
                                                                      aaaaaCGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTtaat                                                                       <  2:1492131/141‑1 (MQ=255)
                                                                        aaaCGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTtaataa                                                                     >  2:606512/1‑141 (MQ=255)
                                                                            gtgtTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTTTTTTTTTTTTTTTCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACttt                                                                 >  2:240781/1‑141 (MQ=255)
                                                                            gtgtTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACttt                                                                 >  2:249879/1‑141 (MQ=255)
                                                                            gtgtTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATGATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACttt                                                                 >  1:1570032/1‑141 (MQ=255)
                                                                              gtTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACttttt                                                               <  1:509009/141‑1 (MQ=255)
                                                                               ttCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTc                                                              >  2:953572/1‑141 (MQ=255)
                                                                                     aaTATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACATTCCCGTCTTTAATAACTTTTTCTGCGtg                                                        >  2:1167589/1‑141 (MQ=255)
                                                                                         taCTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGtgattg                                                    <  1:643440/141‑1 (MQ=255)
                                                                                           cTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGtgattgat                                                  <  2:915671/141‑1 (MQ=255)
                                                                                            ttGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTGTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATa                                                 >  2:100329/1‑141 (MQ=255)
                                                                                             tGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATAc                                                <  1:764569/141‑1 (MQ=255)
                                                                                                    aCAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATg                                         >  2:745998/1‑141 (MQ=255)
                                                                                                    aCAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATg                                         >  1:110662/1‑141 (MQ=255)
                                                                                                     cAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGa                                        >  1:266668/1‑141 (MQ=255)
                                                                                                        aCCACAAAAAGCTCTAAACATTAGTTTAAACCANTGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGatat                                     >  1:1468883/1‑141 (MQ=255)
                                                                                                         ccACAAAAAGCTCTAAACATTAGTCTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATg                                    <  2:130579/141‑1 (MQ=255)
                                                                                                           acaAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGata                                      <  2:1287259/137‑1 (MQ=255)
                                                                                                           acaAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGata                                      >  1:1287259/1‑137 (MQ=255)
                                                                                                           acaAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGa                                  >  1:28196/1‑141 (MQ=255)
                                                                                                            tagaaaGCTCTAAGCATTGGTTTAAACTAATGTTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTtaa                                                                        >  1:1630402/4‑102 (MQ=25)
                                                                                                            tagaaaGCTCTAAGCATTGGTTTAAACTAATGTTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTtaa                                                                        <  2:1630402/99‑1 (MQ=25)
                                                                                                              aaaaGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAata                               >  2:1597155/1‑141 (MQ=255)
                                                                                                              aaaaGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAata                               <  1:1260638/141‑1 (MQ=255)
                                                                                                               aaaGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATGTGGAatat                              >  1:77257/1‑141 (MQ=255)
                                                                                                                 aGCTCTAAGCATTGGTTTAAACTAATGTTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATACGCAatatat                            >  2:503175/1‑141 (MQ=38)
                                                                                                                   ctctAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTc                          <  1:1174207/141‑1 (MQ=255)
                                                                                                                   ctctAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTc                          <  2:704560/141‑1 (MQ=255)
                                                                                                                   ctctAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTc                          <  1:432154/141‑1 (MQ=255)
                                                                                                                   ctctAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTAATTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTc                          <  2:786786/141‑1 (MQ=255)
                                                                                                                    tctAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCa                         >  1:1625074/1‑141 (MQ=255)
                                                                                                                      taagcATTGGTTTAAACTAATGTTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCATg                       >  1:1024766/5‑141 (MQ=255)
                                                                                                                        agcATTGGTTTAAACTAATGTTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATg                                         <  2:845786/119‑1 (MQ=39)
                                                                                                                        agcATTGGTTTAAACTAATGTTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATg                                         >  1:845786/3‑121 (MQ=39)
                                                                                                                        aaCATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCATGAt                     >  1:1579153/1‑141 (MQ=255)
                                                                                                                          cATTGGTTTAAACTAATGTTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCATGAttt                   >  1:902440/1‑141 (MQ=255)
                                                                                                                          cATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTCATACCAAAATGATATGGAATATATTCATGAttt                   <  1:864344/141‑1 (MQ=255)
                                                                                                                            ttggTTTAAACTAATGTTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCATGATTTgg                 >  1:627966/4‑141 (MQ=255)
                                                                                                                             tAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCATGATTTGGt                >  2:1378267/1‑141 (MQ=255)
                                                                                                                                   aaaCCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCATGATTTGGTGCATcc          <  2:395186/141‑1 (MQ=255)
                                                                                                                                    aaCCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGCATATATTCATGATTTGGTGCATccc         >  2:1092034/1‑141 (MQ=255)
                                                                                                                                      ccAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCATGATTTGGTGCATCCCaa       <  2:865487/141‑1 (MQ=255)
                                                                                                                                      ccAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCATGATTTGGTGCATCCCaa       <  1:1431154/141‑1 (MQ=255)
                                                                                                                                           gCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCATGATTTGGTGCATCCCAAATTAc  <  2:1097109/141‑1 (MQ=255)
                                                                                                                                           gCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCATGATTTGGTGCATCCCAAATTAc  <  2:800548/141‑1 (MQ=255)
                                                                                                                                           gCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCATGATTTGGTGCATCCCAAATTAc  <  1:42720/141‑1 (MQ=255)
                                                                                                                                            cTTAGAGCTTTCTAATTATCTTATGCTTTAAAAGATACTGTGTTATCTACGATGAcc                                                                                     <  1:1195850/57‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                           
AGACAGTTGTTTAATAATATCGTAACACTGTTGTCAAACTATTCTAACTTTTATAATTGAGACTCTATACAAAAACGTGTTCTCGAATATACTTGTTTTTACAAACCACAAAAAGCTCTAAACATTAGTTTAAACCAATGCTTAGAGCTTTCTAATTATTTTATGCTTTAAAAGATACTGTGTTATCTACGATGACCTTACCGTCTTTAATAACTTTTTCTGCGTGATTGATACCAAAATGATATGGAATATATTCATGATTTGGTGCATCCCAAATTAC  >  CP000730/2448358‑2448637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: