Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 618,558 T→C 6.5% S1220S (AGT→AGC sdrD → Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730618,5580TC 6.5% 402.6 / 5.1 152S1220S (AGT→AGCsdrDSer‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrD
Reads supporting (aligned to +/- strand):  ref base T (73/67);  new base C (7/5);  total (80/72)
Fisher's exact test for biased strand distribution p-value = 7.69e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 155 total aligned reads displayed.

TCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGA  >  CP000730/618418‑618698
                                                                                                                                            |                                                                                                                                            
tCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGt                                                                                                                                              >  1:1226049/1‑141 (MQ=255)
  aGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGa                                                                                                                                            <  2:931062/141‑1 (MQ=255)
   gattCAGATGGCGACGCAGATTCAGACAGCGACTCAGATTCAGACAGCGACACAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGAc                                                                                                                                           <  2:1534565/138‑1 (MQ=255)
   gACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGACTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGATTCAGATAGtagc                                                                                                                                           >  2:1560668/1‑138 (MQ=255)
       cAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGCGACtcag                                                                                                                                       <  1:1311212/141‑1 (MQ=255)
        aGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGCGACTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGCGACtcaga                                                                                                                                      >  2:177988/1‑141 (MQ=255)
         gATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGATTCAGACTCAGACAGCGACTCAGACTCAGACAGTGATTCAGATTCAGACAGCGACtcagat                                                                                                                                     <  1:202540/141‑1 (MQ=11)
           tAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACtcagattc                                                                                                                                   <  1:1179078/141‑1 (MQ=255)
           tAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACtcagattc                                                                                                                                   >  1:573704/1‑141 (MQ=255)
           tAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGACTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACtcagattc                                                                                                                                   >  2:1041880/1‑141 (MQ=255)
                    agattcagacagcgactcagattcagacagcgactcAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGa                                                                                                                          <  1:901297/141‑1 (MQ=255)
                    agattcagacagcgactcagattcagacagcgactcAGACTCAGATAGCGACTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACACAGATAGCGACTCAGATTCAGATAGCGa                                                                                                                          >  2:1614464/1‑141 (MQ=255)
                     gattcagacagcgactcagattcagacagcgactcaGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGAc                                                                                                                         <  1:891067/141‑1 (MQ=255)
                      attcagacagcgactcagattcagacagcgactcagACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACt                                                                                                                        <  2:1083643/141‑1 (MQ=255)
                      actcagacagcgattcagattcagacagcgactcagaCTCGGATAGCGATTCAGATTCAGATAGCGATTCGGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACt                                                                                                                        >  2:1213417/3‑141 (MQ=11)
                       ttcagacagcgactcagattcagacagcgacacagaCTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTc                                                                                                                       <  2:343966/141‑1 (MQ=255)
                         cagacagcgactcagattcagacagcgactcagaCTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGCGACTCAGACTCAGATAGCGACTCAGATTCAGATAGCGACTCAg                                                                                                                     >  2:1573561/1‑141 (MQ=255)
                           gacagcgactcagattcagacagcgactcagaCTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGAt                                                                                                                   <  1:1006133/141‑1 (MQ=255)
                             cagcgactcagattcagacagcgactcagaCTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTc                                                                                                                 <  1:1418682/141‑1 (MQ=255)
                                cgactcagattcagacagcgactcagaCTCAGCTAGTGATTCAGACGCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGa                                                                                                              <  1:1562258/141‑1 (MQ=255)
                                cgactcagattcagacagcgactcagaCTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGa                                                                                                              <  1:639933/141‑1 (MQ=255)
                                cgactcagattcagacagcgacacagaCTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGa                                                                                                              <  2:398300/141‑1 (MQ=255)
                                            agccagcgagtcagaTTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGa                                                                                                  <  1:1213543/138‑1 (MQ=255)
                                            agacagcgactcagaCTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGa                                                                                                  >  1:347589/1‑141 (MQ=255)
                                             gacagcgactcagaCTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGAc                                                                                                 <  1:1176133/141‑1 (MQ=255)
                                              acagcgactcagaCTCAGATAGTGATTCAGACTCAGATAACGACTCAGATTCAGACAGCGACACAGACGCAGACAGCGCCTCAGACGTAGATAGTGATTCGCATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACt                                                                                                >  1:1613537/1‑141 (MQ=14)
                                               cagcgactcagaCTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACCCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTc                                                                                               <  1:1292414/141‑1 (MQ=255)
                                               cagcgactcagaCTCAGATAGTGATTCAGACTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTc                                                                                               <  1:494765/141‑1 (MQ=255)
                                               cagcgactcagaCGCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTGAGATTCAGATAGCGACTCAGATTCGAATAGCGATTCAGACTc                                                                                               >  1:435636/1‑141 (MQ=255)
                                                     ctcagactcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGCGACTCAGACTCAGATAGCGACTCAGAATCAGATAGCGACCGAGATTCAGAAAGCGATTCAGACTCAGATAg                                                                                         >  2:231477/1‑141 (MQ=14)
                                                     ctcagactcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGACTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAg                                                                                         >  2:45242/1‑141 (MQ=255)
                                                     ctcagactcagaTAGTGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAg                                                                                         <  2:688948/141‑1 (MQ=255)
                                                      tcagactcagaTAGTGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGCGACACAGACACAGACAGCGATTCAGACACAGATAgg                                                                                        >  2:1546808/1‑140 (MQ=11)
                                                        agactcagaTGGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGa                                                                                      <  2:1002515/141‑1 (MQ=255)
                                                         gactcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGAc                                                                                     <  1:735963/141‑1 (MQ=255)
                                                         gactcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGAc                                                                                     <  1:603991/141‑1 (MQ=255)
                                                         gactcagaTAGTGACTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGAc                                                                                     <  1:636382/141‑1 (MQ=255)
                                                         gactcagaTAGCGATCCAGACTCAGATAGCGGCTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGAc                                                                                     <  2:844641/141‑1 (MQ=255)
                                                          actcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACt                                                                                    >  1:1200418/1‑141 (MQ=255)
                                                           ctcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGATTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACtc                                                                                   <  1:879913/141‑1 (MQ=255)
                                                            tcagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACtca                                                                                  <  1:1369682/141‑1 (MQ=255)
                                                             cagaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACtcag                                                                                 >  1:637769/1‑141 (MQ=255)
                                                              agaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACtcaga                                                                                <  1:1560668/141‑1 (MQ=255)
                                                              agaTAGTGATTCAGACTCAGATAGCGACTCAGATGCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACtcaga                                                                                >  1:1486447/1‑141 (MQ=255)
                                                               gaTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGACTCAGATAACGACTCGGACGCAGATAGCGACTCAGACCCAGATAGCGACgcagat                                                                               >  2:456167/1‑141 (MQ=11)
                                                               gaTAGTGATTCAGACTCAGATAGCGACTCAGAATCAGAAGGCGGCTGAGACGCGGACAGGGACTGGGACGCGGATAGTGATTCAGAGTCGGAGAGCGATTCAGAATCGGACAGCGATTCAGACTCAGATAGCGATtcagaa                                                                               >  2:12793/1‑140 (MQ=2)
                                                                 tagcgactcagattcagatAGTGATTCAGACTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACtcagattc                                                                             >  2:740387/8‑141 (MQ=11)
                                                                   gTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGACTCAGATAGCGACTCAGACTCAGACAGCGATTCAGACTCAGATAGAGAAtcagattcag                                                                           >  2:398975/1‑141 (MQ=14)
                                                                    tGATTCTGACTCAGATAGCGACTCAGATGTAGATAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACtcagattcaga                                                                          <  2:1147153/141‑1 (MQ=255)
                                                                    tGATTCAGTCTCAGTTAGCGACTCAGTTTCAGAATTCGACTTAACATCTGACCGCGACTCAGACCCAGATAGTGACTCAGATGCAGATAGTGACTCAGATTCGGACAGCGATACAGACTCAGATAGCGACtcagattcaga                                                                          <  2:1312974/141‑1 (MQ=17)
                                                                     gATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACtcagattcagat                                                                         >  1:723230/1‑141 (MQ=255)
                                                                       ttCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGCGACTCAGACTCAGATAGTGACTCAGACTCAGATAGCGACTCAGACTCAGATAGCGATTCAGACTCAGATAGCGACTCAGATACAGATAg                                                                       >  2:1656317/1‑141 (MQ=14)
                                                                       ttCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCCGATTCAGATAGCGACACAGAACCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAg                                                                       >  1:1238723/1‑141 (MQ=255)
                                                                       ttCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAg                                                                       <  1:1037488/141‑1 (MQ=255)
                                                                                aGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGa                                                              <  1:979140/141‑1 (MQ=255)
                                                                                    aGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGa                                                                    <  1:1173690/131‑1 (MQ=255)
                                                                                    aGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGa                                                                    >  2:1173690/1‑131 (MQ=255)
                                                                                      cGACTCCGATTCCGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGa                                                        <  2:1511228/141‑1 (MQ=255)
                                                                                      cGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGa                                                        <  2:498963/141‑1 (MQ=255)
                                                                                      cGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGACTCAGATAGCGACTCAGACTCGGACAGCGAATCAGACTCAGATAGCGACCCAGATTCAGATAGCGATTGGGACTCAGa                                                        >  2:1587126/1‑141 (MQ=14)
                                                                                       gACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGa                                                                    <  1:1482777/128‑1 (MQ=255)
                                                                                       gACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGa                                                                    >  2:1482777/1‑128 (MQ=255)
                                                                                         cTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAg                                                     <  1:474699/141‑1 (MQ=255)
                                                                                         cTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACCCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATGCGGACGGCGATTGAGACACAGATAGCGACTCAGATTCAGACAGCGATTCGGACTCAGATAg                                                     >  2:697539/1‑141 (MQ=17)
                                                                                           cAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTc                                                                 <  2:1383698/127‑1 (MQ=255)
                                                                                           cAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTc                                                                 >  1:1383698/1‑127 (MQ=255)
                                                                                            aGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGACTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGATTCGGACTCAGATAGCGa                                                  >  1:1114303/1‑141 (MQ=255)
                                                                                               ttCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtc                                               <  1:1391985/141‑1 (MQ=255)
                                                                                                  agacagcgactcagactcagacagcgactcagactcAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcaga                                            >  1:1106594/1‑141 (MQ=255)
                                                                                                  agacagcgactcagactcagacagcgactcagactcAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcaga                                            <  2:525190/141‑1 (MQ=255)
                                                                                                   gacagcgactcagactcagacagcgactcagactcaGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTTAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagat                                           >  1:202379/1‑141 (MQ=255)
                                                                                                   gacagcgactcagactcagacagcgactcagactcaGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagat                                           >  1:1290549/1‑141 (MQ=255)
                                                                                                   gacagcgactcagactcagacagcgactcagactcaGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGATAGCGACtcagat                                           >  2:813687/1‑141 (MQ=255)
                                                                                                     cagcgactcagactcagacagcgactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagattc                                         >  1:1418071/1‑141 (MQ=255)
                                                                                                       gcgactcagactcagacagcgactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagattcag                                       >  1:767872/1‑141 (MQ=255)
                                                                                                         gactcagactcagacagcgactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagattcagat                                     <  1:1321121/141‑1 (MQ=255)
                                                                                                           ctcagactcagacagcgactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAg                                   <  1:692929/141‑1 (MQ=255)
                                                                                                           ctcagactcagacagcgactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGATAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAg                                   >  2:371072/1‑141 (MQ=255)
                                                                                                             cagactcagacagcgactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTg                                 >  1:61038/1‑141 (MQ=255)
                                                                                                              aggctcagacagcgactcaggttcagaTAGCGACTCAGAATCAGATAGCGATTCGGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGa                                <  1:1028278/138‑1 (MQ=11)
                                                                                                               gactcagacagcgactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGAt                               >  1:1608020/1‑141 (MQ=255)
                                                                                                                   cagacagcgactcagactcagaTAGTGACTCAGACTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAg                           >  2:746827/1‑141 (MQ=255)
                                                                                                                    agacagcgactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGa                          >  2:228136/1‑141 (MQ=255)
                                                                                                                    agacagcgactcagactcagaTAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGa                          <  2:1004730/141‑1 (MQ=255)
                                                                                                                       ctgcgactgagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTc                       <  2:28235/139‑1 (MQ=14)
                                                                                                                       cagcgactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTGAGACTCAGATAGCGAATCAGAGGCAGATAGCGAGACAGACTCAGATAGCGACTCAGATGCAGATAGTGATACAGACTc                       >  2:880342/1‑141 (MQ=17)
                                                                                                                       cagcgactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCGGATAGTGATTCAGACTc                       >  1:645511/1‑141 (MQ=255)
                                                                                                                       cagcgactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTc                       <  1:262482/141‑1 (MQ=255)
                                                                                                                       cagcgactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGAATCAGATAGTGATTCAGACTc                       >  1:179573/1‑141 (MQ=255)
                                                                                                                        agtgactcagattcagaCAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCa                      <  2:1608011/138‑1 (MQ=255)
                                                                                                                          cgactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGa                    >  1:1000683/1‑141 (MQ=255)
                                                                                                                           gactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGAt                   >  1:1452204/1‑141 (MQ=255)
                                                                                                                           gactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGAt                   >  1:152813/1‑141 (MQ=255)
                                                                                                                           gactcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGACTCAGATAGTGATTCAGACTCAGAt                   >  1:91714/1‑141 (MQ=255)
                                                                                                                            actcagactcagaTAGTGACTCAGAATCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATa                  <  2:484879/141‑1 (MQ=255)
                                                                                                                             ctcagactcagaTGGTGACTCAGACTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAg                 <  2:644100/141‑1 (MQ=255)
                                                                                                                             ctcagactcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAg                 >  2:1414064/1‑141 (MQ=255)
                                                                                                                                 gactcagaTAGTGACTCAGATTCAGATAGCGACTCAGAGGCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGAc             >  1:44493/1‑141 (MQ=255)
                                                                                                                                   ctcagaTAGTGACTCAGATTCAGATAGCGACTCAGATTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTc           <  2:82373/141‑1 (MQ=255)
                                                                                                                                          aGTGACACAGATTCAGATACCGACTCAGATTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCCGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCa    <  2:519944/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                            
TCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGTGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGA  >  CP000730/618418‑618698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: