| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 547170 | 33 (0.600) | 4 (0.080) | 4/238 | NT | 11.6% | intergenic (+70/‑187) | hpt/ftsH | hypoxanthine phosphoribosyltransferase/cell division protein FtsH |
| ? | CP000730 | = 547176 | 30 (0.580) | intergenic (+76/‑181) | hpt/ftsH | hypoxanthine phosphoribosyltransferase/cell division protein FtsH | |||||
ACGGTTTAGATTATCGTGAATTATACCGAAACTTACCATATATCGGTACGTTAAAACCTGAAGTGTATTCAAATTAATTTTTTAATCAATTTCAGTTATTATTACTATGCGTTTGAGAAATAATAGTGTAGACTCAAAAATATGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/547024‑547170‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atatgaaaTACATTTTTCATATTTTTGAGTCTACACTATTATTTCTCAAACGCATAGTAATAATAACTGAAATTGATTAAAAAATTAATTTGAATA < CP000730/547176‑547089 ACGGTTTAGATTATCGTGAATTATACCGAAACTTACCATATATCGGTACGTTAAAACCTGAAGTGTATTCAAATTAATTTTTTAATCAATTTCAGTTATTATTACTATGCGTTTGAGAAATAATAGTGTAGACTCAAAAAT < 1:551087/141‑1 CGTGAATTATACCGAAACTTACCATATATCGGTACGTTAAAACCTGAAGTGTATTCAAATTAATTTTTTAATCAATTTCAGTTATTATTACTATGCGTTTGAGAAATAATAGTGTAGACTCAAAAATATGAAATACATTTT < 1:55599/141‑1 ATTTTTTAATCAATTTCAGTTATTATTACTATGCGTTTGAGAAATAATAGTGTAGACTCAAAAATATGAAAAATGTATTTCATATTTTTGAGTCTACACTATTATTTCTTAAACGCATAGTAATAATAACTGAAATTGATT > 1:602395/1‑141 AATCAATTTCAGTTATTATTACTATGCGTTTGAGAAATAATAGTGTAGACTCAAAAATATGAAAAATGTATTTCATATTTTTGAGTCTACACTATTATTTTTCAAACGCATAGTAATAATAACTGAAATTGATTAAAAAAT > 1:645938/1‑141 GTTATTATTACTATGCGTTTGAGAAATAATAGTGTAGACTCAAAAATATGAAAAATGTATTTCATATTTTTGAGTCTACACTATTATTTCTCAAACGCATAGTAATAATAACTGAAATTGATTAAAAAATTAATTTGAATA > 1:516211/1‑141 ACGGTTTAGATTATCGTGAATTATACCGAAACTTACCATATATCGGTACGTTAAAACCTGAAGTGTATTCAAATTAATTTTTTAATCAATTTCAGTTATTATTACTATGCGTTTGAGAAATAATAGTGTAGACTCAAAAATATGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/547024‑547170‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atatgaaaTACATTTTTCATATTTTTGAGTCTACACTATTATTTCTCAAACGCATAGTAATAATAACTGAAATTGATTAAAAAATTAATTTGAATA < CP000730/547176‑547089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |