New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP000730 | 2141638 = | 51 (0.930) | 3 (0.060) | 3/242 | NT | 5.9% | coding (450/1617 nt) | groEL | chaperone GroEL |
? | CP000730 | 2141666 = | 47 (0.900) | coding (422/1617 nt) | groEL | chaperone GroEL |
CTTCTAGTTCAGTGTTTAGTCCATTTGATTCTTCAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACATTTTTCAAGCCTTCTTGAATCATTGCTTGAGCT > CP000730/2141529‑2141806 | cTTCTAGTTCAGTGTTTAGTCCATTTGATTCTTCAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCAtttt > 2:248690/1‑141 (MQ=255) gTTCAGTGTTTAGTCCATTTGATTCTTCAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTAtttt > 1:552380/1‑141 (MQ=255) ttCAGTGTTTAGTCCATTTGATTCTTCAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTc > 2:273399/1‑141 (MQ=255) tCAGTGTTTAGTCCATTTGATTCTTCAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCa < 1:177751/141‑1 (MQ=255) gtggtgcgaacccagttggtttacgacaaggtatcgacaaagcagttaaagttgctgttgaagcgttacatgaaaattctcaaaaagttgaaaataaaaaTGAAAT‑‑CGCACCTACTTGCGCAATTTCAttttt > 1:645867‑M1/101‑133 (MQ=255) gtggtgcgaacccagttggtttacgacaaggtatcgacaaagcagttaaagttgctgttgaagcgttacatgaaaattctcaaaaagttgaaaataaaaaTGAAAT‑‑CGCACCTACTTGCGCAATTTCAttttt < 2:645867‑M1/33‑1 (MQ=255) ttAGTCCATTTGATTCTTCAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACttttt > 2:371057/1‑141 (MQ=255) tAGTCCATTTGATTCTTCAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTg < 2:552380/141‑1 (MQ=255) aGTCCATTTGATTCTTCAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTga < 1:150522/141‑1 (MQ=255) gTCCATTTGATTCTTCAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTgag < 1:259017/141‑1 (MQ=255) gTCCATTTGATTCTTCAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTgag > 2:163491/1‑141 (MQ=255) aacccagttggtttacgacaaggtatcgacaaagcagttaaagttgctgttgaagcgttacatgaaaattctcaaaaagttgaaaataaaaatgaaatcgcacctacttgcgcaatttcaTTTTTATTTTCAACTTTTTga < 1:508254‑M2/21‑1 (MQ=255) cATTTGATTCTTCAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAAt > 1:355175/1‑141 (MQ=255) ttGATTCTTCAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAAtttt < 2:229766/141‑1 (MQ=255) ttcttcAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCAtt > 2:596066/1‑140 (MQ=255) tcttcAATTGTAATGACACCATCGTTACCTACTTTTTCCATTGCTTCAGAACTATAACGTCCAAATACTTCATCTGCTGCTGAAAT‑‑CACACCTACTTGCGCAATTTCATTTCTATTTTCTACTTTTTGATATTTTTCATGt > 2:163702/1‑141 (MQ=255) ttcAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTaa > 1:425239/1‑141 (MQ=255) aTTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCt > 1:196471/1‑141 (MQ=255) tGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGACGTATAACGGCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTc > 2:367146/1‑141 (MQ=255) gTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTCCTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCa > 2:72089/1‑141 (MQ=255) gACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGc < 2:277234/141‑1 (MQ=255) ccATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACt > 1:515064/1‑141 (MQ=255) cGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTaa < 1:13707/141‑1 (MQ=255) cGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTaa < 1:528019/141‑1 (MQ=255) gTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAAc < 1:432056/141‑1 (MQ=255) gTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAAc < 1:146718/141‑1 (MQ=255) gTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAAc > 2:119359/1‑141 (MQ=255) gTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAAc < 2:341708/141‑1 (MQ=255) aCCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGc < 2:394598/141‑1 (MQ=255) cTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCtt < 1:97925/141‑1 (MQ=255) cTACTTTTTCCATAGCATCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCtt > 2:101367/1‑141 (MQ=255) ttttCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAAGAGCAACTTTAACTGCTTTGTCg > 1:591240/1‑141 (MQ=255) ccATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTCTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATAc > 2:659516/1‑141 (MQ=255) ttttCAGAAATATAACGTCCAATTTCTTTATCTGCTGCTGAAAT‑‑CGGACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCATCTTTAACTGCTTTGTCGATACCTTGt > 2:602012/3‑141 (MQ=255) cAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACATTAACTGCTTTGTCGATACCTTGTCGTa > 1:628750/1‑141 (MQ=255) aGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTaa < 1:273399/141‑1 (MQ=255) gAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTaaa > 1:214874/1‑141 (MQ=255) aatgtccagctccttcATCTGCTGCTGAAAA‑‑CGCACGTACTTGCGCAAGTGCTTTGTTATTTTCACCTTTTTGATTAGTTCAATGTATTGCTTCCAAAGCGACTTTAAGCGCGTTGTCGAGACCTTGCCGTATACGAACTg > 2:280724/13‑141 (MQ=255) aaCGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTg < 2:522581/141‑1 (MQ=255) tcaaaaagttgaaaataaaaaTGAAATTGCGCAAGTAGGTGCG‑‑ATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGtt < 1:508254‑M1/120‑1 (MQ=255) ccAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTc < 2:226658/141‑1 (MQ=255) ttcttcATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGATAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGcacc < 2:157669/141‑1 (MQ=255) tCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTa < 2:88723/141‑1 (MQ=255) ctgctgctgAAAT‑‑CGCGCCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTaa < 2:422647/141‑1 (MQ=255) ctgctgctgAAAT‑‑CGCACCTACTTGCGCAATTTGATTTTTATTTTCAACTTTTTGAGATTTTTCATGTAACGCTTCAACCGCAACTCTAACTGCTTTGTCTATACCTTGTCGTAAACCACCTGGGTTCGCACCACTTGTaa < 2:536487/141‑1 (MQ=255) gctgctgAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACa > 1:368445/1‑141 (MQ=255) aaaaatgaaattgcgcaagtaggtgcgatttcaTTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGcaccac > 1:645867‑M2/34‑133 (MQ=255) aaaaatgaaattgcgcaagtaggtgcgatttcaTTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGcaccac < 2:645867‑M2/100‑1 (MQ=255) gctgAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACAttt > 2:87425/1‑141 (MQ=255) ctgAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACAtttt > 2:691717/1‑141 (MQ=255) TGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTTATTTTTTTTTTGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCTATACCTTGTCGTAAACCAACTGAGTTCGCACCACTTGTAACAttttt < 2:637214‑M1/141‑1 (MQ=255) GAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACATTTTTc > 1:586650‑M1/1‑141 (MQ=255) AAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACATTTTTCa > 2:212638‑M1/1‑141 (MQ=255) AAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACATTTTTCa > 1:31688‑M1/1‑141 (MQ=255) AAT‑‑CGCACCTACTTGCGCAATATCATTGTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCCCACAACTtgtaacatcgttgag < 2:25155‑M1/141‑8 (MQ=255) T‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACATTTTTCAAGc < 2:230760‑M1/141‑1 (MQ=255) cACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACATTTTTCAAGCctt > 1:294811/1‑141 (MQ=255) ccTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGTTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACATTTTTCAAGCcttct < 2:101247/141‑1 (MQ=255) ccTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTGTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACATTTTTCAAGCcttct < 2:517579/141‑1 (MQ=255) cTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACATTCTTCAAGCcttctt > 2:593670/1‑141 (MQ=255) cgcAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACATTTTTCAAGCCTTCTTGAATCAt > 1:493449/1‑141 (MQ=255) atttcaTTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACATTTTTCAAGCCTTCTTGAATCATTGCt > 1:627701‑M2/7‑141 (MQ=255) tcaTTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACATTTTTCAAGCCTTGTTGAATCATTGCTTGa < 1:248690‑M2/138‑1 (MQ=255) tttttATTTTCAACTTTTTAAGAATTTTCATGTAACGCTTCAACAACAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACAATTTTCATGCCTTCTTGAATCATTGCTTGAGCt < 2:680503/141‑1 (MQ=255) | CTTCTAGTTCAGTGTTTAGTCCATTTGATTCTTCAATTGTAATGACACCATCGTTACCTACTTTTTCCATAGCTTCAGAAATATAACGTCCAATTTCTTCATCTGCTGCTGAAAT‑‑CGCACCTACTTGCGCAATTTCATTTTTATTTTCAACTTTTTGAGAATTTTCATGTAACGCTTCAACAGCAACTTTAACTGCTTTGTCGATACCTTGTCGTAAACCAACTGGGTTCGCACCACTTGTAACATTTTTCAAGCCTTCTTGAATCATTGCTTGAGCT > CP000730/2141529‑2141806 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |