| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 90,248 | Δ1 bp | 6.5% | intergenic (‑1292/+1453) | USA300HOU_0086 ← / ← USA300HOU_0089 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 90,248 | 0 | A | . | 6.5% | 236.7 / 11.2 | 77 | intergenic (‑1292/+1453) | USA300HOU_0086/USA300HOU_0089 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (35/36); new base . (3/2); total (39/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
AATAAAATAGAAGTATTAGATACTTTATTGCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAATATGACGTTAATTCTATAAATGATGTCAGA > CP000730/90109‑90380 | aaTAAAATAGATGTATTAGTTACTTTATTGCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATGTTTAGAACTAAGTAATATGATACTCGTGTTAGATGATATGCTCGACGTCAat < 1:509298/141‑1 (MQ=255) aTAAAATAGAAGTATTAGATACTTTATTGCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAata > 2:963235/1‑141 (MQ=255) aaTAGAAGTATTAGATACTTTATTGCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTNTTAGATGATATGCTCGACGTCAatatata < 1:730766/141‑1 (MQ=255) aTAGAAGTATTAGATACTTTATTGCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAatatatat > 1:89070/1‑141 (MQ=255) gAAGTATTAGATACTTTATTGCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAatatatatata > 1:1022016/1‑141 (MQ=255) aaTACTTTATTGCTAAAATAACTATCGCATTCTTCAACTACTGAAAATATATCTTTAGATATATCAAGATTTTTACAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCtt < 2:1057845/140‑1 (MQ=255) aTACTTTATTGCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCttt > 2:189458/1‑141 (MQ=255) aCTTTATTGCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTa < 1:1056710/141‑1 (MQ=255) cTTTATTGCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCA‑‑ATATATATATAAATTCTTTTaaaa > 1:96225/1‑141 (MQ=255) ttATTGCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTaaaa > 1:387671/1‑141 (MQ=255) aTTGCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAaat < 1:167352/141‑1 (MQ=255) tGCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAaataa < 1:871182/141‑1 (MQ=255) gCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAaataat > 2:823451/1‑141 (MQ=255) cTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAataata < 1:375243/141‑1 (MQ=255) caCTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAACTAATCCATTaga > 2:482289/2‑141 (MQ=255) aaCTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTaga > 2:599819/1‑141 (MQ=255) aaCTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCA‑‑ATATATATATAAATTCTTTTAAAAATAATACATTAgaga < 1:182354/141‑1 (MQ=255) tATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGAc > 2:1056556/1‑141 (MQ=255) tATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGAc > 1:515594/1‑141 (MQ=255) tATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGAc > 2:669060/1‑141 (MQ=255) tATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGAc > 2:494869/1‑141 (MQ=255) tCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCACTATATATATATAAATTCTTTTAAAAATAATACATTAGAGACAt > 1:581450/1‑141 (MQ=255) tCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACAt > 2:755390/1‑141 (MQ=255) tCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACAt < 2:29544/141‑1 (MQ=255) tCGAATACTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACAt < 2:527883/141‑1 (MQ=255) cGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACAtt < 1:268253/141‑1 (MQ=255) tcttcAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATg < 1:47802/141‑1 (MQ=255) cttcAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGc > 2:360220/1‑141 (MQ=255) tcAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGa > 1:665142/1‑141 (MQ=255) aaCTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACt < 1:40339/141‑1 (MQ=255) aCTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTg > 2:994102/1‑141 (MQ=255) aCTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTg > 1:273867/1‑141 (MQ=255) cTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCA‑‑ATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATc > 2:379026/1‑141 (MQ=255) aCAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATc < 1:805919/141‑1 (MQ=255) cAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATcc < 1:691025/141‑1 (MQ=255) aGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCt < 1:1085216/141‑1 (MQ=255) aaaaTATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGa < 1:679353/141‑1 (MQ=255) aaaTATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGaa < 2:563858/141‑1 (MQ=255) atatatCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGt < 2:1085988/141‑1 (MQ=255) tatCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGa > 1:46197/1‑141 (MQ=255) tatCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGa < 2:852691/141‑1 (MQ=255) atCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGAt < 1:983921/141‑1 (MQ=255) tCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGATACATTTGATGCGACTGATTCTTAAGTTGAtt > 2:616729/1‑141 (MQ=255) ataGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACa > 2:223826/1‑141 (MQ=255) aGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATc < 2:701879/141‑1 (MQ=255) atatatCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCAc < 1:622681/141‑1 (MQ=255) tatatCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACt < 2:1058534/141‑1 (MQ=255) tatatCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACt < 1:1046517/141‑1 (MQ=255) tatatCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACt < 1:596348/141‑1 (MQ=255) tCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGaaa > 2:266508/1‑141 (MQ=255) cAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCA‑‑ATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAg < 2:494446/141‑1 (MQ=255) aaGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAaataa < 2:244926/86‑1 (MQ=255) aaGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAaataa > 1:244926/1‑86 (MQ=255) aGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAg < 2:379436/141‑1 (MQ=255) aTTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGga < 1:931653/141‑1 (MQ=255) tttttAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGgag > 1:961426/1‑141 (MQ=255) tttAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTAAATCAATGACATAGGAGAt > 2:1024299/1‑141 (MQ=255) agcaCTAAGTAATATGAAACTCTTGTTAGATGATATGCTCGACGCCAATATATATATATAAATTATTTTAAATATAATACATTAGAGACATTTGATGCGACTGCTCCTGAAGTTGATTCCATCACTAAAATAGGAGACTAc > 2:829538/4‑141 (MQ=255) aGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGGTTAc > 1:832496/1‑141 (MQ=255) aGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCAATGAAATAGGAGATTAc > 2:315130/1‑141 (MQ=255) aGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTCGATTACATCACTGAAATAGGAGATTAc > 2:727680/1‑141 (MQ=255) gAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACt < 2:903026/141‑1 (MQ=255) aaCTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGCGATTACtt > 2:361839/1‑141 (MQ=255) aaCTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACtt > 2:201215/1‑141 (MQ=255) cTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACttat > 2:38842/1‑141 (MQ=255) tAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACttatt > 1:673641/1‑141 (MQ=255) aGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTaa < 1:189458/141‑1 (MQ=255) aGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACAGTAGAGACATTTGATGCGACTAATTCTGAAGTTGATTACATCACTGTAATAGGAGATTACTTATTaa > 2:822349/1‑141 (MQ=255) gTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTaaa > 1:521263/1‑141 (MQ=255) atatGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAata > 2:1065551/1‑141 (MQ=255) atGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAATATg < 1:313279/141‑1 (MQ=255) aTACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAATATGACg < 1:593049/141‑1 (MQ=255) ctTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAATATGACGTTAAt < 1:1009026/141‑1 (MQ=255) ctTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAATATGACGTTAAt < 1:944355/141‑1 (MQ=255) tAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAATATGACGTTAATTCtat < 1:1056556/141‑1 (MQ=255) atgatATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAATATGACGTTAATTCTATaaa > 2:956550/1‑141 (MQ=255) gCTCGACGTCA‑‑ATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAATATGACGTTAATTCTATAAATGATGTCAg > 2:781790/1‑141 (MQ=255) tCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGTTGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGAAGATTACTTATTAAAATCTGACGTTAATTCTATAAATGGTGTCAg > 2:894467/1‑141 (MQ=255) tCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAATATGACGTTAATTCTATAAatgatg < 1:515086/137‑1 (MQ=255) tCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAATATGACGTTAATTCTATAAatgatg > 2:515086/1‑137 (MQ=255) tCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAATATGACGTTAATTCTATAAATGATGTCAg < 2:974700/141‑1 (MQ=255) cGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAATATGACGTTAATTCTATAAATGATGTCAGa < 2:105678/141‑1 (MQ=255) | AATAAAATAGAAGTATTAGATACTTTATTGCTAAAAAAACTATCGAATTCTTCAACTACAGAAAATATATCTATAGATATATCAAGATTTTTAGAACTAAGTAATATGATACTCTTGTTAGATGATATGCTCGACGTCAATATATATATATAAATTCTTTTAAAAATAATACATTAGAGACATTTGATGCGACTGATCCTGAAGTTGATTACATCACTGAAATAGGAGATTACTTATTAAAATATGACGTTAATTCTATAAATGATGTCAGA > CP000730/90109‑90380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |