New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP000730 | 1575673 = | 81 (0.910) | 7 (0.080) | 5/248 | NT | 8.2% | coding (1844/6201 nt) | hlgB | possible bacteriophage tail protein |
? | CP000730 | 1575710 = | 78 (0.920) | coding (1807/6201 nt) | hlgB | possible bacteriophage tail protein |
TTTTAGCCTTGATTGAAGCGGGACCAGATAAAATTAATAGCTATAGTAAATCCTTAAAGAATTCCAATGGCGAAAGTAAAAAAGCAGCAGATTTGATGAAAGATAATCTCAAAGGCGCTCTGGAACAATTAGGTGGCGCTTTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1575817‑1575673 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgaGATTATCTTTCATCAAATCTGCTGCTTTTTTACTTTCGCCATTGGAATTCTTTAAGGATTTACTATAGCTATTAATTTTATCTGGTCCCGCTTCAATCAAGGCTAAAAATCCACTTGCTGCTTCAGTACCAACTATTGT > CP000730/1575710‑1575848 TTTTAGCCTTGATTGAAGCGGGACCAGATAAAATTAATAGCTATAGTAAATCCTTAAAGAATTCCAATGGCGAAAGTAAAAAAGCAGCAGATTTGATGAAAGATAATCTCAAAGGCGCTCTGGAACAATTAGGTGGCGCTT < 2:639847/141‑1 TTTAGCCTTGATTGAAGCGGGACCAGATAAAATTAATAGCTATAGTAAATCCTTAAAGAATTCCAATGGCGAAAGTAAAAAAGCAGCAGATTTGATGAAAGATAATCTCAAAGGCGCTCTGGAACAATTAGGTGGCGCTTT > 2:801720/1‑141 TTAGCCTTGATTGAAGCGGGACCAGATAAAATTAATAGCTATAGTAAATCCTTAAAGAATTCCAATGGCGAAAGTAAAAAAGCAGCAGATTTGATGAAAGATAATCTCAAAGGCGCTCTGGAACAATTAGGTGGCGCTTTT < 1:34352/141‑1 TTAGCCTTGATTGAAGCGGGACCAGATAAAATTAATAGCTATAGTAAATCCTTAAAGAATTCCAATGGCGAAAGTAAAAAAGCAGCAGATTTGATGAAAGATAATCTCAAAGGCGCTCTGGAACAATTAGGTGGCGCTTTT < 1:857633/141‑1 TAGCCTTGATTGAAGCGGGACCAGATAAAATTAATAGCTATAGTAAATCCTTAAAGAATTCCAATGGCGAAAGTAAAAAAGCAGCAGATTTGATGAAAGATAATCTCAAAGGCGCTCTGGAACAATTAGGTGGCGCTTTTG < 1:552465/141‑1 AGCCTTGATTGAAGCGGGACCAGATAAAATAAATAGCTATAGTAACTCCTTAAAGAATTCCAATGGCGAAAGTAAAAAAGCAGCAGATTTGATGAAAGATAATCTCAAAGGCGCTCTGGAACAATTAGGTGGCGCTTTTGA < 2:590845/141‑1 ATCTCAAAGGCGCTCTGGAACAATTAGGTGGCGCTTTTGAGATTATCTTTCATCAAATCTGCTGCTTTTTTACTTTCGCCATTGGAATTCTTTAAGGATTTACTATAGCTATTAATTTTATCTGGTCCCGCTTCAATCAAG > 1:465208/1‑141 AGGCGCTCTGGAACAATTAGGTGGCGCTTTTGAGATTATCTTTCATCAAATCTGCTGCTTTTTTACTTTCGCCATTGGAATTCTTTAAGGATTTACTATAGCTATTAATTTTATCTGGTCCCGCTTCAATCAAGGCTAAAA > 2:668891/1‑141 AGGCGCTCTGGAACAATTAGGTGGCGCTTTTGAGATTATCTTTCATCAAATCTGCTGCTTTTTTACTTTCGCCATTGGAATTCTTTAAGGATTTAC < 1:122625/96‑1 AGGCGCTCTGGAACAATTAGGTGGCGCTTTTGAGATTATCTTTCATCAAATCTGCTGCTTTTTTACTTTCGCCATTGGAATTCTTTAAGGATTTAC > 2:122625/1‑96 GCGCTCTGGAACAATTAGGTGGCGCTTTTGAGATTATCTTTCATCAAATCTGCTGCTTTTTTACTTTCGTCATTGGAATTCTTTAAGGAGTTACTATAGCTATTAATTTTATCTGGTCCCGCTTCAATCCAGGCTAAAAAT > 2:154874/1‑141 TGGAACAATTAGGTGGCGCTTTTGAGATTATCTTTCATCAAATCTGCTGCTTTTTTACTTTCGCCATTGGAATTCTTTAAGGATTTACTATAGCTATTAATTTTATCTGGTCCCGCTTCAATCAAGGCTAAAAATCCACTT > 1:1064118/1‑141 TGGAACAATTAGGTGGCGCTTTTGAGATTATCTTTCATCAAATCTGCTGCTTTTTTACTTTCGCCATTGGAATTCTTTAAGGATTTACTATAGCTATTAATTTTATCTGGTCCCGCTTCAATCAAGGCTAAAAATCCACTT > 1:1064285/1‑141 TTGAGATTATCTTTCATCAACTCTGCTGCTTTTTTACTTTCGCCATTGGAATTCTTTAAGGATTTACTATAGCTATTAATTTTATCTGGTCCCGCTTCAATCAAGGCTAAAAATCCACTTGCTGCTTCAGTACCAACTATT > 2:483365/1‑141 TTGAGATTATCTTTCATCAAATCTGCTGCTTTTTTACTTTCGCCATTGGAATTCTTTAAGGATTTACTATAGCTATTAATTTTATCTGGTCCCGCTTCAATCAAGGCTAAAAATCCACTTGCTGCTTCAGTACCAACTATT > 1:924918/1‑141 GAGATTATCTTTCATCAAATCTGCTGCTTTTTTACTTTCGCCATTGGAATTCTTTAAGGATTTACTATAGCTATTAATTTTATCTGGTCCCGCTTCAATCAAGGCTAAAAATCCACTTGCTGCTTCAGTACCAACTATTGT < 2:931579/141‑1 TTTTAGCCTTGATTGAAGCGGGACCAGATAAAATTAATAGCTATAGTAAATCCTTAAAGAATTCCAATGGCGAAAGTAAAAAAGCAGCAGATTTGATGAAAGATAATCTCAAAGGCGCTCTGGAACAATTAGGTGGCGCTTTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1575817‑1575673 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgaGATTATCTTTCATCAAATCTGCTGCTTTTTTACTTTCGCCATTGGAATTCTTTAAGGATTTACTATAGCTATTAATTTTATCTGGTCCCGCTTCAATCAAGGCTAAAAATCCACTTGCTGCTTCAGTACCAACTATTGT > CP000730/1575710‑1575848 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |