New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 267655084 (0.960)4 (0.050)
+TTAG
4/248 NT 4.7% intergenic (‑22/+25) ilvB2/cidB pyruvate oxidase/hypothetical membrane protein
?CP000730 2676551 = 84 (0.950)intergenic (‑23/+24) ilvB2/cidB pyruvate oxidase/hypothetical membrane protein
Rejected: Frequency below/above cutoff threshold.

TGTACGTAAACTATCGACTACTGCGTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCATTTCTAGTGCTTTAGCTGT  >  CP000730/2676412‑2676691
                                                                                                                                           |                                                                                                                                            
tGTACGTAAACTATCGACTACTGCGTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTg                                                                                                                                             >  2:446057/1‑141 (MQ=255)
cgtaaactatcgacaactgcgtcgattgagtctcctggaataccatacaagtgatctatatcccatgcttgtaatgctttaactaatgcttcatttgcttttatttttgccattattactaatagcctccctttcttagtg                                                                                                                                             >  2:193398‑M2/140‑141 (MQ=255)
 gTACGTAAACTATCGACTACTGCGTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGt                                                                                                                                            >  1:432480/1‑141 (MQ=255)
    cGTAAACTATCGACTACTGCGTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTAGTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTa                                                                                                                                         >  1:11009/1‑141 (MQ=255)
     gTAAACTATCGACTACTGCGTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTAt                                                                                                                                        <  2:22820/141‑1 (MQ=255)
      tAAACTATCGACTACTGCGTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATc                                                                                                                                       >  1:202872/1‑141 (MQ=255)
       aaaCTATCGACTACTGCGTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCa                                                                                                                                      <  2:55688/141‑1 (MQ=255)
           tATCGACTACTGCGTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCAtttt                                                                                                                                  >  2:936984/1‑141 (MQ=255)
           tATCGACTACTGCGTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCAtttt                                                                                                                                  <  2:632338/141‑1 (MQ=255)
           tATCGACTACTGCGTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCAtttt                                                                                                                                  >  2:529898/1‑141 (MQ=255)
              cGACTACTGCGTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTCTaaa                                                                                                                               >  1:140066/1‑141 (MQ=255)
               gACTACTGCGTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAat                                                                                                                              >  2:455233/1‑141 (MQ=255)
                acgcagtagTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTCTCATTTTAAata                                                                                                                             >  1:573617/9‑141 (MQ=255)
                      cgattgagtctcctggaataccatacaagtgatctatatcccatgcttgtaatgctttaactaatgcttcatttgcttttatttttgccattattactaatagcctccctttcttagTGTCTATCATTTTAAATATCTaaa                                                                                                                       >  1:164988‑M2/118‑141 (MQ=255)
                         tCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTa                                                                                                                    >  2:556350/1‑141 (MQ=255)
                         agctaagtgTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTa                                                                                                                    <  2:965805/133‑1 (MQ=255)
                          cGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTaa                                                                                                                   <  1:446057/141‑1 (MQ=255)
                             ttGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAg                                                                                                                >  1:294498/1‑141 (MQ=255)
                              tGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGa                                                                                                               <  2:367591/141‑1 (MQ=255)
                                     ccTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAAtaataa                                                                                                        <  2:401019/141‑1 (MQ=255)
                                     ccTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTATATCATTTTAAATATCTAAATTAATAGAAtaataa                                                                                                        >  1:699649/1‑141 (MQ=255)
                                       tGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATaaaa                                                                                                      <  1:196985/141‑1 (MQ=255)
                                       ataccatacaagtgatctatatcccatgcttgtaatgctttaactaatgcttcatttgcttttatttttgccattattactaatagcctccctttcttagTGTCTATCATTTTAAATATCTAAATTAATAGAATAATaaaa                                                                                                      <  1:443276‑M2/41‑1 (MQ=255)
                                           aTACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTCTTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATATAATACTAAAATTAg                                                                                                  >  2:840342/1‑141 (MQ=255)
                                           aTACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAg                                                                                                  >  1:750630/1‑141 (MQ=255)
                                             aCCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGaa                                                                                                >  2:302847/1‑141 (MQ=255)
                                              ccATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAAc                                                                                               >  1:306233/1‑141 (MQ=255)
                                               cATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACa                                                                                              >  1:688940/1‑141 (MQ=255)
                                               cATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACa                                                                                              >  2:12939/1‑141 (MQ=255)
                                                aTACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAg                                                                                             >  1:834856/1‑141 (MQ=255)
                                                  aCAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGt                                                                                           <  1:307350/141‑1 (MQ=255)
                                                       tGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTaa                                                                                      <  2:459940/141‑1 (MQ=255)
                                                        gATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAac                                                                                     >  1:77207/1‑141 (MQ=255)
                                                         aTCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTTCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAACTTAGAACAGGTATTAaca                                                                                    >  2:38009/1‑141 (MQ=255)
                                                         aTCTATATCCCATGATTGTAATGCTTTAACTAATGCATCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAAGAAATAaca                                                                                    >  2:288938/1‑141 (MQ=255)
                                                              tatCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCGTTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGaa                                                                               >  1:821505/1‑141 (MQ=255)
                                                                  ccATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAAGACtcagataa                                                                           >  2:742525/1‑134 (MQ=255)
                                                                    aTGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACtaata                                                                         >  1:474262/1‑141 (MQ=255)
                                                                     tGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACtaataa                                                                        <  1:722946/141‑1 (MQ=255)
                                                                      gCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAAc                                                                       <  2:658106/141‑1 (MQ=255)
                                                                      gCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTAGTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAAc                                                                       >  1:783751/1‑141 (MQ=255)
                                                                       cTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACt                                                                      <  1:142157/141‑1 (MQ=255)
                                                                          tgctctaacgaatgcttcatttgcttttattgtggccattattactaatagtctccctgtcttagTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCa                                                                   <  1:321992‑M2/76‑1 (MQ=255)
                                                                          gTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTTTTTTTTTTTCTAATAGACACCCTTTCAGTCTATCATTTTAAATATCTAAATTAATAGAATCATATACTTAGAACAGGCCTTAACACTGAACTAATAACTGCa                                                                   >  2:1066621/1‑141 (MQ=255)
                                                                          gTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCa                                                                   >  1:112129/1‑141 (MQ=255)
                                                                           tAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAGCTAATAACTGCAg                                                                  <  1:28553/141‑1 (MQ=255)
                                                                           tAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAg                                                                  <  1:339144/141‑1 (MQ=255)
                                                                            aaTGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGt                                                                 <  1:207699/141‑1 (MQ=255)
                                                                            aaTGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGt                                                                 <  1:276110/141‑1 (MQ=255)
                                                                            aaTGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGt                                                                 <  2:527828/141‑1 (MQ=255)
                                                                               gCTTTATCTAATGCTTCATTTGCGTTTATTTTTGCCATTATTACTAATAGCCTCCCTTCCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTACTAACTGCAGTTaa                                                              <  2:967188/141‑1 (MQ=255)
                                                                                cTTTAACTAATGCTTCATTTCCTTTTATTTTTTTCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTaaa                                                             >  2:1087348/1‑141 (MQ=255)
                                                                                 tttAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCCGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAAcaagtgctccta                                                            >  2:535976/1‑130 (MQ=255)
                                                                                   tAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAatc                                                          >  2:894941/1‑141 (MQ=255)
                                                                                    aaCTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAatca                                                         >  1:614952/1‑141 (MQ=255)
                                                                                    aaCTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTCTAAAGATCTAAATTAATAGAAGAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAatca                                                         >  1:487144/1‑141 (MQ=255)
                                                                                     aCTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAatcat                                                        <  1:622785/141‑1 (MQ=255)
                                                                                       tAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATcc                                                      <  2:163539/141‑1 (MQ=255)
                                                                                       tAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATcc                                                      >  1:991823/1‑141 (MQ=255)
                                                                                         aTGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCa                                                    >  2:353709/1‑141 (MQ=255)
                                                                                          tGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCaa                                                   >  2:161738/1‑141 (MQ=255)
                                                                                                aTTTGCTTTTATTTTTTTCTTTATTTCTAATAGCCTCCCGCTCTGGCTATCATTTTCAATATCTAAATTAATAGAATAATAAAATTCGAACAGGAATTAACACTGAACTAATAACTGTAGTTAAAATCATCCCAATTGaaa                                             >  2:880353/1‑140 (MQ=255)
                                                                                                        ttATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCa                                     >  2:455106/1‑141 (MQ=255)
                                                                                                          aTTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCAcc                                   <  2:74885/141‑1 (MQ=255)
                                                                                                          aTTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCAcc                                   >  1:403362/1‑141 (MQ=255)
                                                                                                           ttttttTCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTTAATTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCg                                  >  2:12461/1‑141 (MQ=255)
                                                                                                           tttttGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCg                                  >  1:352775/1‑141 (MQ=255)
                                                                                                             tttGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGa                                <  2:920973/141‑1 (MQ=255)
                                                                                                               tGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGAtt                              <  1:440499/141‑1 (MQ=255)
                                                                                                                gCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTc                             <  1:1701/141‑1 (MQ=255)
                                                                                                                gCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCACAATTGAACCAAATGCACCGGAATc                             >  1:684211/1‑141 (MQ=255)
                                                                                                                  cATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCaa                           >  2:755726/1‑141 (MQ=255)
                                                                                                                    ttattaCTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAata                         >  1:495685/1‑141 (MQ=255)
                                                                                                                     tattaCTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTACTAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAatat                        <  1:298964/141‑1 (MQ=255)
                                                                                                                     tattaCTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAatat                        >  2:650734/1‑141 (MQ=255)
                                                                                                                     tattaCTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAatat                        <  2:776845/141‑1 (MQ=255)
                                                                                                                         aCTAATAGCCTCCCTTTCCGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCAt                    >  2:880989/1‑141 (MQ=255)
                                                                                                                          cTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCAtt                   >  2:653202/1‑141 (MQ=255)
                                                                                                                          cTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCAtt                   >  1:610808/1‑141 (MQ=255)
                                                                                                                           tAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCAttt                  >  1:428318/1‑141 (MQ=255)
                                                                                                                           tAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCAttt                  <  1:1087348/141‑1 (MQ=255)
                                                                                                                           tAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCAttt                  <  2:764165/141‑1 (MQ=255)
                                                                                                                           tAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAAAATCCAttt                  >  2:324690/1‑141 (MQ=255)
                                                                                                                            aaTAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCATTTc                 >  2:853473/1‑141 (MQ=255)
                                                                                                                             aTAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCATTTCt                >  1:862111/1‑141 (MQ=255)
                                                                                                                                ccctttcttagTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCATTTCTAGt             >  1:825013‑M2/12‑141 (MQ=255)
                                                                                                                                  cTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCATTTCTAGTGc           <  1:453251/141‑1 (MQ=255)
                                                                                                                                  cTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCATTTCTAGTGc           <  1:1003266/141‑1 (MQ=255)
                                                                                                                                   tCCCTATCTGTATATCATTTTAAACATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAACTCATCCACCTTGAACTAAATGCACCGGCTTCAATATCCATTTCTAGTGcc          <  2:1083476/141‑2 (MQ=255)
                                                                                                                                    cccTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCATTTCTAGTGCtt         >  2:750034/1‑141 (MQ=255)
                                                                                                                                    cccTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCATTTCTAGTGCtt         <  1:925974/141‑1 (MQ=255)
                                                                                                                                          cTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCATTTCTAGTGCTTTAGCtg   >  2:668256/1‑141 (MQ=255)
                                                                                                                                           tGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCATTTCTAGTGCTTTAGCtgt  <  2:432480/141‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                            
TGTACGTAAACTATCGACTACTGCGTCGATTGAGTCTCCTGGAATACCATACAAGTGATCTATATCCCATGCTTGTAATGCTTTAACTAATGCTTCATTTGCTTTTATTTTTGCCATTATTACTAATAGCCTCCCTTTCTGTCTATCATTTTAAATATCTAAATTAATAGAATAATAAAATTAGAACAGGTATTAACACTGAACTAATAACTGCAGTTAAAATCATCCCAATTGAACTAAATGCACCGGATTCAATATCCATTTCTAGTGCTTTAGCTGT  >  CP000730/2676412‑2676691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.