| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 648,427 | A→T | 5.3% | A90A (GCA→GCT) | mvaD → | diphosphomevalonate decarboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 648,427 | 0 | A | T | 5.3% | 296.2 / 6.4 | 95 | A90A (GCA→GCT) | mvaD | diphosphomevalonate decarboxylase |
| Reads supporting (aligned to +/- strand): ref base A (46/43); new base T (2/3); total (49/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.61e-01 | |||||||||||
AACGAAAGTCACTTTTAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTGTCAGATAAGGATTTATCGAGATTGGCGCGAA > CP000730/648289‑648566 | aaCGAAAGTCACTTTTAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGa < 2:836393/141‑1 (MQ=255) cGAAAGTCACTTTTAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGaaa > 1:744615/1‑141 (MQ=255) gAAAGTCACTTTTAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAAt < 2:1009651/141‑1 (MQ=255) aaaGTCACTTTTAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAAtt > 1:778614/1‑141 (MQ=255) aaGTCACTTTTAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTg > 2:208653/1‑141 (MQ=255) gTCACTTTTAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGaa > 1:328419/1‑141 (MQ=255) gTCACTTTTAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGaa > 1:665268/1‑141 (MQ=255) tCACTTTTAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGaaa > 2:744983/1‑141 (MQ=255) tCACTTTTAACGACCAGTTAACACAGGAGCAATTTTGGTTGAATGGAGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTAAAAATATATGGATATAGTCAGAAATAGAGCTGGCATCTATTGGTATGCAGAAATTGaaa > 2:617815/1‑141 (MQ=255) tCACTCTTAGCGACCAGTTAACACAGGATCAATCTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGAGATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCCGAAATTGaaa > 2:392925/1‑141 (MQ=255) aCTTTTAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGc < 2:623391/141‑1 (MQ=255) ttttAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGa < 1:101386/141‑1 (MQ=255) tttAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGAc < 1:904247/141‑1 (MQ=255) ttAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACa < 1:450438/141‑1 (MQ=255) aCGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGCTATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAAtt < 2:363218/141‑1 (MQ=255) cGACCAGTTAACACAGGATCAATTTTGGTTGAACGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAAttt < 2:356548/141‑1 (MQ=255) gACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAAtttt > 2:1065792/1‑141 (MQ=255) gACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAAtttt > 2:577228/1‑141 (MQ=255) ccAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGt > 1:265668/1‑141 (MQ=255) acAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGt < 2:188395/140‑1 (MQ=255) aatacaGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAAc < 1:161363/138‑1 (MQ=255) aaCACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAAc > 1:264557/1‑141 (MQ=255) aaCACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAAc < 2:699214/141‑1 (MQ=255) acacAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAAca > 1:165990/1‑141 (MQ=255) acacAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAAca > 2:1026305/1‑141 (MQ=255) cacaGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAAcag > 1:208616/1‑141 (MQ=255) caGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCTGAANTTGAAAGCGACANTTTTGTACCAAcagca < 1:729962/141‑1 (MQ=255) caGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCTGAAATTGAAAGCGACAATTTTGTACCAAcagca < 1:1027247/141‑1 (MQ=255) caGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAAcagca > 1:1086675/1‑141 (MQ=255) aGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAAcagcag < 1:166409/141‑1 (MQ=255) ggATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGCTATTGTCAGAAATAGAGCTGCCATCGATTGGTTTGAAGCAATTTAAAGCGACAACTTTGTACCAAgagcagc < 2:39168/141‑1 (MQ=255) ggATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAAcagcagc > 2:950356/1‑141 (MQ=255) gATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAAcagcagca > 2:969477/1‑141 (MQ=255) tCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGAAgg > 1:194217/1‑141 (MQ=255) tCAACTTTGGTTGAATGGTGAAAAGGTTAGTGGCAACGAATTAGAGAAAATTTCCAATTATATGGATATCGCTAGAAGTAGTGCTGGTGCCGAGTCGTAGGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAgg > 1:1028059/1‑141 (MQ=255) cAATTTTGGTTGTATTGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAggg > 2:979730/1‑141 (MQ=255) cAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAggg > 2:520619/1‑141 (MQ=255) aaTTTTGGTTGAATGGTGAAAAGGTTAGTGGCAATGAATTAGAGTAAATTTCAATATATATGGATTTTGTCAGGAATAGAGCTGGCTTCGATTGGTAGGCAGATCTTGAAAGCGACAATTTTGTACCAACTGCAGCAGGGt < 2:138053/141‑1 (MQ=255) aaTTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATTCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGt < 1:442763/141‑1 (MQ=255) ttttGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCCGCAGGGTTg > 2:855969/1‑141 (MQ=255) tttGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTgg < 1:244847/141‑1 (MQ=255) ttGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGc < 1:154432/141‑1 (MQ=255) tGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGCTATTGTCAGAAATAGAGCTGGCATCGACTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGggctggct > 1:835033/1‑141 (MQ=255) tGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCt > 2:984795/1‑141 (MQ=255) tGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTGCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCt > 2:313246/1‑141 (MQ=255) tGGATGAATGGTGTGAAGGGAAGAGGCAGAGCATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAACTGCAAGCGACAATCTTGTACCAGCAGCAGCAGGGTTGCCt > 2:209054/1‑141 (MQ=255) gTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTc > 1:866893/1‑141 (MQ=255) ttGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCa < 2:231922/141‑1 (MQ=255) tGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCAt < 2:725236/141‑1 (MQ=255) gTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCaa > 2:265921/1‑141 (MQ=255) aaaGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAgcgc > 1:44388/1‑141 (MQ=255) aaGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCa > 2:987075/1‑141 (MQ=255) gTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCTGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCAGCAAGCGCatat < 1:718390/141‑1 (MQ=255) ttAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATg > 2:392421/1‑141 (MQ=255) ttAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATg < 2:493278/141‑1 (MQ=255) aGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCa < 1:295122/141‑1 (MQ=255) aGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCa > 2:157687/1‑141 (MQ=255) gCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCtt > 1:101049/1‑141 (MQ=255) cAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTCGGCTTCATCTGCAAGCGCATATGCAGCttt < 1:139569/141‑1 (MQ=255) aaaGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCa > 1:642427/1‑129 (MQ=255) aaaGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCa < 2:642427/129‑1 (MQ=255) aTTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTagcagc > 1:135421/1‑141 (MQ=255) aTTAGAGAAAATTTCAAAAGATATAGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGGTGGCTTCATCGGCAAGCGCATATGCAGCTTTagcagc < 1:1077581/141‑1 (MQ=255) tAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTagcagcag > 1:151982/1‑141 (MQ=255) tAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTagcagcag < 1:928074/141‑1 (MQ=255) gagaAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCt > 2:328273/1‑141 (MQ=255) gaAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTg < 1:520619/141‑1 (MQ=255) aaaTTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTa < 1:442329/141‑1 (MQ=255) aaTTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTGGCAGAAGCTTGTaa < 2:209391/141‑1 (MQ=255) aaTTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTaa < 1:979730/141‑1 (MQ=255) tttCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATc < 2:55597/141‑1 (MQ=255) cAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAg > 1:504509/1‑141 (MQ=255) aaaaTATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAgc > 1:86628/1‑141 (MQ=255) aaaTATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAgcg < 1:409117/141‑1 (MQ=255) aaTATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAgcgc < 2:33212/141‑1 (MQ=255) ggATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTCGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACAt > 1:836013/1‑141 (MQ=255) tatTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCa < 1:309194/141‑1 (MQ=255) tatTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCa < 1:309195/141‑1 (MQ=255) atTGTCAGAAATAGAGCTGTCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAg < 1:732526/141‑1 (MQ=255) tGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAACGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCt < 1:853394/141‑1 (MQ=255) gTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTg < 2:224917/141‑1 (MQ=255) tCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTGt < 1:445068/141‑1 (MQ=255) cAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTGTc > 1:790351/1‑141 (MQ=255) gagCTGGCATCGATTGGTATGCTGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCAGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCACTAGACTTGCAGCTGTCAGATAAgg > 1:200196/1‑141 (MQ=255) gagCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTGTCAGATAAgg > 2:784854/1‑141 (MQ=255) gagCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTGTCAGATAAgg > 2:756563/1‑141 (MQ=255) gagCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGATAGCCATCCAGCTGTCAGATAAgg < 2:222213/141‑1 (MQ=255) ggCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTGTCAGATAAGGATTTa > 2:561182/1‑141 (MQ=255) gCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTGTCAGATAAGGATTTAt < 2:673542/141‑1 (MQ=255) cATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTGTCAGATAAGGATTTATc < 1:982999/141‑1 (MQ=255) cATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTGTCAGATAAGGATTTATc < 1:780144/141‑1 (MQ=255) cGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTGTCAGATAAGGATTTATCgag > 1:393592/1‑141 (MQ=255) tGGTATGCTGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCAGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCACTAGACTTGCAGCTGTCAGATAAGGATTTATCGAGATTg > 2:725189/1‑141 (MQ=255) gCATAAATTGAAAGCTACAATTTTGGACCAACATCATCAGGGGTTGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTGTCATATAAGGATTTATCGAGATTGGCGCGa < 1:593572/141‑1 (MQ=255) cAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTGTCAGATAAGGATTTATCGAGATTGGCGCGaa > 2:625539/1‑141 (MQ=255) | AACGAAAGTCACTTTTAACGACCAGTTAACACAGGATCAATTTTGGTTGAATGGTGAAAAGGTTAGTGGCAAAGAATTAGAGAAAATTTCAAAATATATGGATATTGTCAGAAATAGAGCTGGCATCGATTGGTATGCAGAAATTGAAAGCGACAATTTTGTACCAACAGCAGCAGGGTTGGCTTCATCGGCAAGCGCATATGCAGCTTTAGCAGCAGCTTGTAATCAAGCGCTAGACATGCAGCTGTCAGATAAGGATTTATCGAGATTGGCGCGAA > CP000730/648289‑648566 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |