Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 1,052,436 G→A 6.1% I324I (ATC→ATT)  sspB ← C47 family staphopain B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007301,052,4360GA 6.1% 248.2 / 4.4 82I324I (ATC→ATT) sspBC47 family staphopain B
Reads supporting (aligned to +/- strand):  ref base G (35/42);  new base A (2/3);  total (37/45)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.33e-01

GCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGTTGCACAATTAGGAAGGT  >  CP000730/1052296‑1052575
                                                                                                                                            |                                                                                                                                           
gCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAgg                                                                                                                                             <  2:727739/141‑1 (MQ=255)
    cTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCa                                                                                                                                         <  2:879020/141‑1 (MQ=255)
    cTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCa                                                                                                                                         <  1:627604/141‑1 (MQ=255)
           tGATAATTCTGTAGCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTcc                                                                                                                                  >  2:154156/1‑141 (MQ=255)
            gATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCt                                                                                                                                 <  2:121356/141‑1 (MQ=255)
            gATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCt                                                                                                                                 <  1:698744/141‑1 (MQ=255)
              tAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTAc                                                                                                                               <  1:163718/141‑1 (MQ=255)
              tAATACTGTATCCCAAGGATTCCAGTAAATAAGTGTTTCTTGGTCATTAATTTTAGCATTACCAACAGCTGCTAGCGCATGTCATAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTAc                                                                                                                               <  2:218798/141‑1 (MQ=255)
                aTTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACAt                                                                                                                             <  2:908269/141‑1 (MQ=255)
                 ttCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACAtt                                                                                                                            <  2:452355/141‑1 (MQ=255)
                   cTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTAt                                                                                                                          >  2:650552/1‑141 (MQ=255)
                     gTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCt                                                                                                                        >  2:207098/1‑141 (MQ=255)
                      tATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCtt                                                                                                                       <  1:730089/141‑1 (MQ=255)
                      tATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCtt                                                                                                                       <  2:1023058/141‑1 (MQ=255)
                       aTCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGGGCATGTCCTAAATGTGGATCATTAGGGTTTTGAGATACACTTTGTGCAAGAATCATAATTCCTACATTATCttt                                                                                                                      <  2:788744/141‑1 (MQ=255)
                        tCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCtttt                                                                                                                     <  1:584351/141‑1 (MQ=255)
                         cccAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTg                                                                                                                    <  1:891469/141‑1 (MQ=255)
                         cccAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTg                                                                                                                    <  2:185995/141‑1 (MQ=255)
                             aGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAg                                                                                                                <  2:557270/141‑1 (MQ=255)
                              ggATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGt                                                                                                               <  2:29123/141‑1 (MQ=255)
                                   ccAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATc                                                                                                          <  1:356108/141‑1 (MQ=255)
                                   ccAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATc                                                                                                          >  1:552258/1‑141 (MQ=255)
                                    cAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCa                                                                                                         <  2:307225/141‑1 (MQ=255)
                                    cAGTAAATAAGTTTTTCTAGGCCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTAGCTTTTGGAAGTTGATCa                                                                                                         >  2:237403/1‑141 (MQ=255)
                                      gTAAATAAGTTTTTCTTGGTCATTAATTTTAGCAGTACCAACAACTGCGAGCGCTTGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAAc                                                                                                       <  2:1059499/141‑1 (MQ=255)
                                         aaTAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTg                                                                                                    <  1:242356/141‑1 (MQ=255)
                                           tAAGTTTTTCTTGGTCATTAATTTTAGCATTACCTACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGtt                                                                                                  <  2:495905/141‑1 (MQ=255)
                                             aGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCa                                                                                                >  2:1059262/1‑141 (MQ=255)
                                             aGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGGTCa                                                                                                >  2:137268/1‑141 (MQ=255)
                                             aGTTTTTCTTGGTCATTAATTGTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGTGATACACTTTGTGCGAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCa                                                                                                <  2:1008171/141‑1 (MQ=255)
                                              gTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAACGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCat                                                                                               >  1:934865/1‑141 (MQ=255)
                                                     ttGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATgg                                                                                        >  2:67917/1‑141 (MQ=255)
                                                      tGGTCATTAATTTTAGCATTACCAACAACTGCTAGGGCATGTCCTAAATGTGGATCATTAGGGTTTTGAGATACACTTTGTGCAAGAATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGt                                                                                       >  1:669741/1‑141 (MQ=255)
                                                      tGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGt                                                                                       >  2:603826/1‑141 (MQ=255)
                                                       ggTCATTAATTTTAGCATTACCAACAACTGCTAGGGCATGTCCTAAATGTGGATCATTAGGGTTTTGAGATACACTTTGTGCAAGAATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTa                                                                                      <  1:534245/141‑1 (MQ=255)
                                                           aTTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGTTACGcc                                                                                  >  2:486709/1‑141 (MQ=255)
                                                              aaTTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCcttc                                                                               >  2:825008/1‑141 (MQ=255)
                                                                ttttAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTATTCATATGATGGTACGCattctt                                                                             >  2:267781/1‑141 (MQ=255)
                                                                     gCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATaa                                                                        >  1:948371/1‑141 (MQ=255)
                                                                         tACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGaa                                                                    <  1:49851/141‑1 (MQ=255)
                                                                            caacaaCTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAatat                                                                 <  2:975540/141‑1 (MQ=255)
                                                                            caacaaCTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAatat                                                                 <  2:930019/141‑1 (MQ=255)
                                                                             aacaacTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATAtc                                                                >  2:347905/1‑141 (MQ=255)
                                                                               caacTGCTAGGGCATGTCCTAAATGTGGATCATTAGGGTTTTGAGATACACTTTGTGCAAGAATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATAtctc                                                              <  1:56712/141‑1 (MQ=255)
                                                                               caacTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATAtctc                                                              >  1:436523/1‑141 (MQ=255)
                                                                               caacTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATAtctc                                                              <  2:704942/141‑1 (MQ=255)
                                                                                 acTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTg                                                            <  1:895962/141‑1 (MQ=255)
                                                                                   tGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGcc                                                          >  2:877265/1‑141 (MQ=255)
                                                                                    gttAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCt                                                         <  1:427709/139‑1 (MQ=255)
                                                                                     cTAGGGCATGTCCTAAATGTGGATCATTAGGGTTTTGAGATACACTTTGTGCAAGAATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATTTGATGGTACGCCTTCTTGATAATGAATATCTCTGCCtt                                                        >  2:615041/1‑141 (MQ=255)
                                                                                     cTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCtt                                                        >  2:953084/1‑141 (MQ=255)
                                                                                         cgcATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGa                                                    <  1:218619/141‑1 (MQ=255)
                                                                                               tCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGAACATAATTCCTACATTCTCTTTTGTAAGTTGATCAACTTGTTCATATTATGGTACGCCTTCTTGATAATGAGTATCTCTGCCTTGTGATTTAcc                                              >  1:291867/1‑141 (MQ=255)
                                                                                                 cTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGt                                            <  1:913635/141‑1 (MQ=255)
                                                                                                   aaaTGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTAt                                          >  1:873581/1‑141 (MQ=255)
                                                                                                     aTGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTc                                        <  2:166962/141‑1 (MQ=255)
                                                                                                        tgGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAAt                                     >  1:406383/1‑141 (MQ=255)
                                                                                                         gggTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGAGCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATc                                    <  2:1048166/141‑1 (MQ=255)
                                                                                                          ggTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCa                                   >  2:74086/1‑141 (MQ=255)
                                                                                                          ggTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCa                                   >  2:588528/1‑141 (MQ=255)
                                                                                                           gTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCAt                                  <  2:1053927/141‑1 (MQ=255)
                                                                                                           gTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATACCTCTGCCTTGTGATTTACCGTATTCAATCAt                                  <  1:630067/141‑1 (MQ=255)
                                                                                                              aTTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTg                               <  2:1069935/141‑1 (MQ=255)
                                                                                                              aTTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTg                               >  2:304453/1‑141 (MQ=255)
                                                                                                                 aGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGAtt                            <  1:1013341/141‑1 (MQ=255)
                                                                                                                   ggTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTTAATCATTTGATTAg                          >  1:1060426/1‑141 (MQ=255)
                                                                                                                   ggTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAg                          >  1:776454/1‑141 (MQ=255)
                                                                                                                   ggTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAg                          <  1:853334/141‑1 (MQ=255)
                                                                                                                     ttttGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAggg                        >  2:827108/1‑141 (MQ=255)
                                                                                                                        tGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTTCTTACGGAAt                     >  2:129747/1‑141 (MQ=255)
                                                                                                                           gaTACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGtt                  >  1:334448/1‑141 (MQ=255)
                                                                                                                           gaTACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGtt                  >  1:349786/1‑141 (MQ=255)
                                                                                                                             tACATTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGACTTCTTGATAATGAATATCTCTGCCTTGGGATTTACCGTATTCAATCATTTGATTaaaggcaggtaa                <  2:476827/141‑12 (MQ=255)
                                                                                                                                acTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGTTGcaca             <  2:685820/141‑1 (MQ=255)
                                                                                                                                   ttGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGTTGCACAAtt          >  1:742040/1‑141 (MQ=255)
                                                                                                                                    tgtgCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGTTGCACAATTa         >  1:230083/1‑141 (MQ=255)
                                                                                                                                    tgtgCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGTTGCACAATTa         <  2:606831/141‑1 (MQ=255)
                                                                                                                                     gtgCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGTTGCACAATTAg        >  2:684374/1‑141 (MQ=255)
                                                                                                                                       gCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGTTGCACAATTAGGa      <  1:436664/141‑1 (MQ=255)
                                                                                                                                       gCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGTTGCACAATTAGGa      <  2:635351/141‑1 (MQ=255)
                                                                                                                                         aaGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATCATGAATATCTCTGCCTTGTGATTTACCGTCTTCAATCATTTGATTAGGTACTGTTGCACAATTacgcag    >  2:822656/1‑136 (MQ=255)
                                                                                                                                         aaGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGTTGCACCATTAGGAAg    <  2:427688/141‑1 (MQ=255)
                                                                                                                                         aaGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGTTGCACAATTAGGAAg    >  2:680871/1‑141 (MQ=255)
                                                                                                                                           ggATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGTTGCACAATTAGGAAGGt  <  1:650552/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                           
GCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCATTTGATTAGGGAATGTTGCACAATTAGGAAGGT  >  CP000730/1052296‑1052575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑