BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	1,512,101	C→T	8.6%	T96T (ACG→ACA)	ypbR ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	1,512,101	0	C	T	8.6%	311.3 / 11.6	107	T96T (ACG→ACA)	ypbR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (49/47); new base T (7/2); total (57/50)
Fisher's exact test for biased strand distribution p-value = 1.70e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 109 total aligned reads displayed.

TTTGAATCAACACCTGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCGATTTACCTGCAGA  >  CP000730/1511961‑1512241

tttGAATCAACACCTGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATAc                                                                                                                                              <  1:1044034/141‑1 (MQ=255)

  tGAATCAACACCTGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGt                                                                                                                                            >  1:970900/1‑141 (MQ=255)

   gAATCAACACCTGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATATGtt                                                                                                                                           >  1:418571/1‑141 (MQ=255)

    aaTCAACACCTGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGttt                                                                                                                                          >  2:243303/1‑141 (MQ=255)

    aaTCAACACCTGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGttt                                                                                                                                          >  2:400048/1‑141 (MQ=255)

     aTCAACACCTGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATATGTTTg                                                                                                                                         >  1:711556/1‑141 (MQ=255)

     aTCAACACCTGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTg                                                                                                                                         >  1:8334/1‑141 (MQ=255)

       cAACACCTGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGAt                                                                                                                                       >  2:108124/1‑141 (MQ=255)

        aaCACCTGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGAtt                                                                                                                                      >  1:797035/1‑141 (MQ=255)

         acacCTGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATATGTTTGATTc                                                                                                                                     >  1:719600/1‑141 (MQ=255)

             cTGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCa                                                                                                                                 >  1:594914/1‑141 (MQ=255)

              tGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCg                                                                                                                                    >  2:813993/1‑137 (MQ=255)

              tGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCg                                                                                                                                    <  1:813993/137‑1 (MQ=255)

               ggTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATAAGTTTGATTCGGCaaa                                                                                                                               >  2:32257/1‑141 (MQ=255)

                 tgtATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAAtt                                                                                                                             >  1:995654/1‑141 (MQ=255)

                  gtATCTTGCAACGTAAACCCATTTTCAAATTTATCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTa                                                                                                                            >  1:975923/1‑141 (MQ=255)

                  gtATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTa                                                                                                                            >  1:129611/1‑141 (MQ=255)

                  gtATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTa                                                                                                                            >  2:396484/1‑141 (MQ=255)

                  gtATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTa                                                                                                                            >  2:602898/1‑141 (MQ=255)

                          cAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCaataat                                                                                                                    <  2:472240/141‑1 (MQ=255)

                            aCGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATActat                                                                                                                  >  1:599756/1‑141 (MQ=255)

                              gTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCg                                                                                                                <  1:640953/141‑1 (MQ=255)

                               tAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATATGTTTGATTCGGCAAATTAGCAATAATATCGt                                                                                                               >  1:392641/1‑141 (MQ=255)

                               tAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGt                                                                                                               <  2:980537/141‑1 (MQ=255)

                               tAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGt                                                                                                               <  1:1035533/141‑1 (MQ=255)

                               tAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGt                                                                                                               >  1:1048899/1‑141 (MQ=255)

                                  aCCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGAt                                                                                                            <  2:946175/141‑1 (MQ=255)

                                      aTTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTc                                                                                                        <  1:114699/141‑1 (MQ=255)

                                      aTTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTc                                                                                                        <  1:1081880/141‑1 (MQ=255)

                                      aTTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAAGTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTc                                                                                                        <  2:703194/141‑1 (MQ=255)

                                       ttttCAAATTTAGCTAATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTTGTCTTAAGTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATAGCGTGATTGTcg                                                                                                       <  2:1033030/141‑2 (MQ=255)

                                        tttCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATAGTGATTGTCTg                                                                                                      >  2:1078579/1‑141 (MQ=255)

                                          tCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATATGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGaa                                                                                                    <  2:142931/141‑1 (MQ=255)

                                           cAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGaaa                                                                                                   >  2:842642/1‑141 (MQ=255)

                                            aaaTTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAAc                                                                                                  >  2:346496/1‑141 (MQ=255)

                                             aaTTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACt                                                                                                 >  1:696237/1‑141 (MQ=255)

                                              aTTTAGCTGATTGAAAATTAATTTCTACAGATTAATCCCCGACACTCTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTg                                                                                                <  1:209693/141‑1 (MQ=255)

                                                ttATCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATCCGTTTGATTCGGCGAATTGCCAATAATATCGTGATTGTCTGAAACTGac                                                                                              <  2:864964/141‑1 (MQ=255)

                                                ttAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGac                                                                                              <  1:589565/141‑1 (MQ=255)

                                                    cTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACaa                                                                                          >  2:524548/1‑141 (MQ=255)

                                                            aaaTTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTa                                                                                  <  2:530512/141‑1 (MQ=255)

                                                              attaattTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTAtt                                                                                <  2:741394/141‑1 (MQ=255)

                                                                taattTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTaa                                                                              >  2:1047358/1‑140 (MQ=255)

                                                                taattTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTAc                                                                              <  1:717261/141‑1 (MQ=255)

                                                                 aattTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCGTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACt                                                                             <  1:556934/141‑1 (MQ=255)

                                                                   tttCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTg                                                                           <  1:1026681/141‑1 (MQ=255)

                                                                   tttCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTg                                                                           <  1:960571/141‑1 (MQ=255)

                                                                   tttCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATCACTTg                                                                           >  1:968335/1‑141 (MQ=255)

                                                                    ttCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGt                                                                          >  2:656002/1‑141 (MQ=255)

                                                                           aaTTCAACGTCGACATTTTGGCGATTTATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGt                                                                   <  2:199664/140‑1 (MQ=255)

                                                                            aTTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTa                                                                  >  2:1067401/1‑141 (MQ=255)

                                                                             gtCAACGTCGACAATTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTAc                                                                 >  2:979223/2‑141 (MQ=255)

                                                                               cAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAg                                                               >  2:1041392/1‑141 (MQ=255)

                                                                               cAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAg                                                               <  2:288889/141‑1 (MQ=255)

                                                                                aaCGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAgg                                                              <  2:685539/141‑1 (MQ=255)

                                                                                aaCGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAgg                                                              >  1:267024/1‑141 (MQ=255)

                                                                                aaCGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAgg                                                              >  1:348562/1‑141 (MQ=255)

                                                                                aaCGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAgg                                                              <  1:158638/141‑1 (MQ=255)

                                                                                 aCGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATATGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAggg                                                             >  1:436602/1‑140 (MQ=255)

                                                                                 aCGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATATGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGt                                                             <  2:169348/141‑1 (MQ=255)

                                                                                 aCGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGt                                                             >  1:767320/1‑141 (MQ=255)

                                                                                 aCGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGt                                                             <  2:352757/141‑1 (MQ=255)

                                                                                   gTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGa                                                           <  1:133338/141‑1 (MQ=255)

                                                                                     cGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAAc                                                         >  2:65952/1‑141 (MQ=255)

                                                                                          ttttGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGt                                                    >  1:705639/1‑141 (MQ=255)

                                                                                            ttGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTaa                                                  <  1:337051/141‑1 (MQ=255)

                                                                                              ggCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGa                                                <  1:32450/141‑1 (MQ=255)

                                                                                                cGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGata                                              >  2:1017339/1‑141 (MQ=255)

                                                                                                      aTTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGt                                        <  1:619493/141‑1 (MQ=255)

                                                                                                          cccTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCaa                                    >  2:312807/1‑141 (MQ=255)

                                                                                                             ttACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATta                                 >  2:821500/1‑141 (MQ=255)

                                                                                                               aCTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATtaat                               >  2:903926/1‑141 (MQ=255)

                                                                                                                cTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATNTCTTGTTCAATtaata                              <  1:1053871/141‑1 (MQ=255)

                                                                                                                cTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATtaata                              <  2:558895/141‑1 (MQ=255)

                                                                                                                cTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATtaata                              >  1:268052/1‑141 (MQ=255)

                                                                                                                  tcatcaTAATTAGATAATTTGGCATATGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATaaa                            >  2:1054971/1‑141 (MQ=255)

                                                                                                                  tcatcaTAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATaaa                            <  2:333130/141‑1 (MQ=255)

                                                                                                                    atcatAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAAtt                          >  1:166274/1‑141 (MQ=255)

                                                                                                                       atAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTAt                       >  2:326477/1‑141 (MQ=255)

                                                                                                                          aTTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAg                    >  2:833186/1‑141 (MQ=255)

                                                                                                                          aTTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAg                    <  2:556197/141‑1 (MQ=255)

                                                                                                                           ttAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAgt                   <  1:5528/141‑1 (MQ=255)

                                                                                                                             aGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAgtgt                 >  2:934000/1‑141 (MQ=255)

                                                                                                                             aGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAgtgt                 >  2:1053391/1‑141 (MQ=255)

                                                                                                                              gATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTc                >  1:364959/1‑141 (MQ=255)

                                                                                                                               aTAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCg               <  1:357344/141‑1 (MQ=255)

                                                                                                                               aTAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCg               <  1:104629/141‑1 (MQ=255)

                                                                                                                               aTAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCg               <  1:448743/141‑1 (MQ=255)

                                                                                                                               aTAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCg               <  2:317366/141‑1 (MQ=255)

                                                                                                                               aTAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCg               <  1:718746/141‑1 (MQ=255)

                                                                                                                                      ggCATAGGTTTGATGGGGCAGATTAGAAATAATATCGTGATTGTCTGAAACTGACACAATAGAAGTATTACGTGTTGTTGATAGTGGGGAACTGGGTAAGAGATCTTGTTAAATTAATATTTTTATCATTGTCGATTGAca        <  2:217956/141‑2 (MQ=255)

                                                                                                                                      ggCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCGATTTAcc        >  1:1039827/1‑141 (MQ=255)

                                                                                                                                       gCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCGATTTACCt       >  2:323034/1‑141 (MQ=255)

                                                                                                                                       gCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCGATTTACCt       >  2:822751/1‑141 (MQ=255)

                                                                                                                                       gCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCGATTCACCt       >  1:777303/1‑141 (MQ=255)

                                                                                                                                        cATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCGATTTACCTg      <  1:133152/141‑1 (MQ=255)

                                                                                                                                        cATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCGATTTACCTg      <  1:951805/141‑1 (MQ=255)

                                                                                                                                          tACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCGATTTACCTGCa    <  1:524548/141‑1 (MQ=255)

                                                                                                                                           aCGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCGATTTACCTGCAg   <  1:990410/141‑1 (MQ=255)

                                                                                                                                            cGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTAGTTGGTACAGCTGCTCTTCGTAAGATATCAACTCCAATTAATAAATTTATCAGTGTCGATTTACCTGCAGa  >  1:158026/1‑141 (MQ=255)

TTTGAATCAACACCTGGTGTATCTTGCAACGTAAACCCATTTTCAAATTTAGCTGATTGAAAATTAATTTCTACAGATTCAACGTCGACATTTTGGCGATTCATTTCCCTTACTTCATCATAATTAGATAATTTGGCATACGTTTGATTCGGCAAATTAGCAATAATATCGTGATTGTCTGAAACTGACACAATAGCAGTATTACTTGTCGTTGGTACAGGTGAACTTGGTAAGATATCTTGTTCAATTAATAAATTTATCAGTGTCGATTTACCTGCAGA  >  CP000730/1511961‑1512241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`