| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 1,868,200 | C→T | 5.1% | V132I (GTT→ATT) | ytnP ← | possible metal‑dependent hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 1,868,200 | 0 | C | T | 5.1% | 258.8 / 2.2 | 81 | V132I (GTT→ATT) | ytnP | possible metal‑dependent hydrolase |
| Reads supporting (aligned to +/- strand): ref base C (41/35); new base T (2/2); total (43/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.53e-01 | |||||||||||
CTTGATACCCAGAACCGGTTCAAAATGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTGCCAAATCAGCAATTATATGAC > CP000730/1868060‑1868340 | cTTGATACCCAGAACCGGTTCAAAATGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCacaac < 1:765595/141‑1 (MQ=255) gagaCCCAGAACCGGTTCAAAATGGTTTTCGAATAAAATCAACTTGGTACTATAATCTCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCGTGTTGCacaacacg > 2:647705/4‑139 (MQ=255) gATACCCAGAACCGGTTCAAAATGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATg > 1:416907/1‑141 (MQ=255) tACCCAGAACCGGTTCAAAATGTTTTTCGAATAAAATGAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGaa > 1:782554/1‑141 (MQ=255) aGAACCGGTTCAAAATGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCa > 2:293141/1‑141 (MQ=255) cGGTTCAAAATGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTc > 1:796687/1‑141 (MQ=255) ggTTCAAAATGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCa < 2:237713/141‑1 (MQ=255) gTTCAAAATGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTTCACAACATGAATCGCATTTTCaa > 2:271077/1‑141 (MQ=255) gTTCAAAATGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCaa > 1:279650/1‑141 (MQ=255) gTTCAAAATGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCaa > 2:213390/1‑141 (MQ=255) gTTCAAAATGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCaa < 1:733119/141‑1 (MQ=255) cAAAATGGTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGAGTTACTTCTTATATGATGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATAGAAATTTCaaaaa < 2:47868/141‑1 (MQ=255) aaaaTGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAAt > 2:798189/1‑141 (MQ=255) aaaaTGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAAt < 1:167299/141‑1 (MQ=255) aaTGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTg < 2:696677/141‑1 (MQ=255) aTGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGc < 1:351196/141‑1 (MQ=255) tGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCCGTGATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCa < 1:1062973/141‑1 (MQ=255) tCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTccc > 1:542969/1‑140 (MQ=255) tCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCt < 1:165391/141‑1 (MQ=255) cGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTg > 2:219383/1‑141 (MQ=255) cGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCGTATTTCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTg > 1:293431/1‑141 (MQ=255) ttttCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAATCTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGAt > 2:11937/4‑141 (MQ=255) aaaTCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGAt < 2:1971/141‑1 (MQ=255) aaTCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATc < 2:741054/141‑1 (MQ=255) cAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCCGt > 2:686279/1‑141 (MQ=255) cAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGt > 1:839524/1‑141 (MQ=255) aaCTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTc > 2:205160/1‑141 (MQ=255) aaCTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTc < 2:169830/141‑1 (MQ=255) aaCTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTc < 1:829143/141‑1 (MQ=255) aaCTTGTTACTAGAATCGCCTTTATACTTAAACCAGCAAGTGGTTTTGCTGCCAATATTAGTTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCAGTATTTAAAAATGGATGTCGTGCtgnaacgggc > 2:812868/1‑132 (MQ=255) tataATAGCATTTATTCTTATCCCAGTAAGTTGATTTACTTATTATATTAAGTGCAATAAACTCATGCCACTTATCTTGTTGCACAAGATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTTAAAACGgcag < 2:51946/141‑1 (MQ=255) taATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGgcagca > 1:624898/1‑141 (MQ=255) aaTCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCAt < 1:1015131/141‑1 (MQ=255) aaTCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCAt < 2:254620/141‑1 (MQ=255) tCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGa < 2:602142/141‑1 (MQ=255) gCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATc < 2:452136/141‑1 (MQ=255) cTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCCGCTTGATCAGTCAAACCGGCAGCATGATCaa < 1:804140/141‑1 (MQ=255) cTTTATTCTTATCCAAGTAAGTTAATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGTCAGCATGATCaa < 2:213101/141‑1 (MQ=255) cTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCa > 1:824454/1‑88 (MQ=255) cTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCa < 2:824454/88‑1 (MQ=255) cTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCat < 1:512339/141‑1 (MQ=255) ttATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCata > 2:978736/1‑141 (MQ=255) tCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATAtgt < 1:494849/141‑1 (MQ=255) cAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTc > 1:740811/1‑141 (MQ=255) aaGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTa < 2:131228/141‑1 (MQ=255) aGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAg > 1:970440/1‑141 (MQ=255) tGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGcac > 2:124441/1‑141 (MQ=255) tttACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATa > 1:883080/1‑141 (MQ=255) aCTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATc < 1:61049/141‑1 (MQ=255) ttcttATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCaa < 2:43445/141‑1 (MQ=255) ttcttATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCaa < 2:511656/141‑1 (MQ=255) cttATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAata > 2:620641/1‑141 (MQ=255) cttATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAata > 2:831462/1‑141 (MQ=255) atatTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATcc > 2:55216/1‑141 (MQ=255) atTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCtt < 1:514420/141‑1 (MQ=255) ttAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCttt > 1:1070221/1‑141 (MQ=255) tAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTg > 1:875998/1‑141 (MQ=255) gCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGtt > 2:1013276/1‑141 (MQ=255) aaTAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTaa > 1:1063685/1‑141 (MQ=255) aTAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTaaa > 1:833496/1‑141 (MQ=255) aTAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTaaa < 2:119597/141‑1 (MQ=255) aTAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTaaa > 2:1075427/1‑141 (MQ=255) aTAAACTCATGCCACTCATCTTGTTGCACAACATGAAGCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCGGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTaaa < 2:658852/141‑1 (MQ=255) aaCTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATta > 2:1054639/1‑141 (MQ=255) aCTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTCGCACATAATCAATATCCTTTGGCGTTAAATtat > 2:1027922/1‑141 (MQ=255) cATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAAt > 1:941393/1‑141 (MQ=255) aTGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAAtt > 1:437679/1‑141 (MQ=255) aTGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAAtt > 2:896605/1‑141 (MQ=255) tGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAAttt < 1:703214/141‑1 (MQ=255) tGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAAttt < 2:782554/141‑1 (MQ=255) tGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAAttt > 1:607363/1‑141 (MQ=255) gCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTg > 1:888021/1‑141 (MQ=255) tCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTGCCAAATCa < 1:201023/141‑1 (MQ=255) tCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTAATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTGCCAAATCa < 1:942400/141‑1 (MQ=255) cTTGTTGCACAATATGAATCGCATTTTCAAAAATTGc > 1:358698/1‑37 (MQ=255) cTTGTTGCACAATATGAATCGCATTTTCAAAAATTGc > 1:358960/1‑37 (MQ=255) cTTGTTGCACAATATGAATCGCATTTTCAAAAATTGc < 2:358698/37‑1 (MQ=255) cTTGTTGCACAATATGAATCGCATTTTCAAAAATTGc < 2:358960/37‑1 (MQ=255) cTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTGCCAAATCAg < 1:498050/141‑1 (MQ=255) cTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTGCCAAATCAg < 2:1015991/141‑1 (MQ=255) cTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTGCCAAATCAg < 1:941231/141‑1 (MQ=255) gttgCACAACATGAATCGCATTTTCAAAAATTGCATGTTCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTGCCAAATCAGCaa > 1:285529/1‑141 (MQ=255) cacaACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTGCCAAATCAGCAATtat > 2:672617/1‑141 (MQ=255) acaacaTGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTGCCAAATCAGCAATtata < 1:196032/141‑1 (MQ=255) caacaTGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTGCCAAATCAGCAATTatat > 1:253783/1‑141 (MQ=255) caacaTGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTGCCAAATCAGCAATTatat > 1:983005/1‑141 (MQ=255) caTGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTGCCAAATCAGCAATTATATGAc < 1:290487/141‑1 (MQ=255) | CTTGATACCCAGAACCGGTTCAAAATGTTTTTCGAATAAAATCAACTTGTTACTATAATCGCCTTTATTCTTATCCCAGTAAGTTGATTTACTTCTTATATTAGGTGCAATAAACTCATGCCACTCATCTTGTTGCACAACATGAATCGCATTTTCAAAAATTGCATGTCCTGCTTGATCAGTCAAACCGGCAGCATGATCAAAATGCATATGTGTCATTAGCACATAATCAATATCCTTTGGCGTTAAATTATAATTTGCCAAATCAGCAATTATATGAC > CP000730/1868060‑1868340 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |