Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 2,284,800 T→C 6.8% intergenic (+6468/+1564) mtlD → / ← glmM mannitol‑1‑phosphate 5‑dehydrogenase/phosphoglucosamine mutase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,284,8000TC 6.8% 282.0 / 6.7 98intergenic (+6468/+1564)mtlD/glmMmannitol‑1‑phosphate 5‑dehydrogenase/phosphoglucosamine mutase
Reads supporting (aligned to +/- strand):  ref base T (53/38);  new base C (4/3);  total (57/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 103 total aligned reads displayed.

GTGTGTGTACCACGTGCCGTTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGTTGCTTTCGGTGCTAAAT  >  CP000730/2284664‑2284940
                                                                                                                                        |                                                                                                                                            
gtgtgtgtACCACGTGCCGTTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAAttatta                                                                                                                                          >  2:203126/1‑141 (MQ=255)
   tgtgtACCACGTGCCGTTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACg                                                                                                                                       <  1:33440/141‑1 (MQ=255)
    gtgtACCACGTGCCGTTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGt                                                                                                                                      <  2:864100/141‑1 (MQ=255)
      gtACCACGTGCCTCTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTaa                                                                                                                                    >  2:496382/1‑141 (MQ=255)
        aCCACGTGCCGTTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGt                                                                                                                                  <  2:467937/141‑1 (MQ=255)
         ccACGTGCCGTTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGtt                                                                                                                                 <  2:774077/141‑1 (MQ=255)
         ccACGTGCCGTTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGtt                                                                                                                                 >  2:797738/1‑141 (MQ=255)
         ccACGTGCCGTTATCACACCTTGGCTTGTAAATGTAACTTTATTTGCATATTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGtt                                                                                                                                 >  2:837953/1‑141 (MQ=255)
           aCGTGCCGTTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTac                                                                                                                               >  2:571489/1‑141 (MQ=255)
           aCGTGCAGTTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTATCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTac                                                                                                                               >  2:85459/1‑141 (MQ=255)
            cGTGCCGTTGTCCCAACTTGGCTTGTAAATGTAACATTATTTGCAGTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGGCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATCATTAACGTAAGTTaca                                                                                                                              >  2:914396/1‑141 (MQ=255)
            cGTGCCGGTGACGCACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTATGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTaca                                                                                                                              >  2:282908/1‑141 (MQ=255)
               gCCGTTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCt                                                                                                                           >  2:880744/1‑141 (MQ=255)
               gCCGATGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGATGTAGTTAATGAATTATTAACGTAAGTTACACCt                                                                                                                           >  1:1004996/1‑141 (MQ=255)
                  gTTGTCACACCTTGGCTTGTAAATGTCACTTTATTTGCATTTTGATAATAATTAACAGTCATATTTATCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTtgt                                                                                                                        <  1:169200/141‑1 (MQ=255)
                  gTTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTtgt                                                                                                                        >  2:955113/1‑141 (MQ=255)
                  gTTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTtgt                                                                                                                        >  2:192832/1‑141 (MQ=255)
                     gTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGt                                                                                                                     <  2:750572/141‑1 (MQ=255)
                      tCACACCTTGGCTTGTAAATGTAACTTTATTTGCAGTTTGATTATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTa                                                                                                                    >  1:934507/1‑141 (MQ=255)
                       cacaCCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTaa                                                                                                                   <  2:195490/141‑1 (MQ=255)
                           ccTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGtt                                                                                                               <  2:248508/141‑1 (MQ=255)
                               ggCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACtt                                                                                                           >  2:316200/1‑141 (MQ=255)
                                gCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGt                                                                                                                                  <  1:675730/117‑1 (MQ=255)
                                gCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGt                                                                                                                                  >  2:675730/1‑117 (MQ=255)
                                         tGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTaaa                                                                                                 >  1:110561/1‑141 (MQ=255)
                                         tGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATAAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTaaa                                                                                                 <  2:581096/141‑1 (MQ=255)
                                          gTAACTTTATTTGCAGTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATCATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAAt                                                                                                >  1:965894/1‑141 (MQ=255)
                                           tAACTTTATTTGCATCTTGATCATAATTAACAGTAATATTTTTCAATCCTGTACTGTCTTCATTACCATTAGAGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTGGTGGTAATGTTACTTCATATTTAAttt                                                                                               >  2:208364/1‑141 (MQ=255)
                                            aaCTTTATTTGCAGTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATCATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTg                                                                                              <  2:319043/141‑1 (MQ=255)
                                              cTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGAt                                                                                            <  1:265463/141‑1 (MQ=255)
                                               tttATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATc                                                                                           <  1:1085005/141‑1 (MQ=255)
                                               tttATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATc                                                                                           >  1:114716/1‑141 (MQ=255)
                                               tttATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATc                                                                                           >  1:114813/1‑141 (MQ=255)
                                               tttATTTGCAGTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATCATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATc                                                                                           >  2:764832/1‑141 (MQ=255)
                                                ttATTTGCATTTTGCTCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCt                                                                                          <  2:44257/141‑1 (MQ=255)
                                                ttATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCt                                                                                          >  2:558391/1‑141 (MQ=255)
                                                 tATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTg                                                                                         <  2:1029490/141‑1 (MQ=255)
                                                  ttttGCATGTTTATCATAAGTAACATTCAGATCGGCCAACACTGTACTGTCGTCATTACCATGAGGTAAGGTTGTAGTTAATGCATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGc                                                                                        <  1:98856/140‑1 (MQ=255)
                                                  aTTTGCAGTTTTATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAAGGAATGTTGTCGTTAATGAATCATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGc                                                                                        <  1:377738/141‑1 (MQ=255)
                                                   tttGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCt                                                                                       >  2:66374/1‑141 (MQ=255)
                                                   tttGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCt                                                                                       >  1:390718/1‑141 (MQ=255)
                                                      gCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCtttt                                                                                    <  1:571489/141‑1 (MQ=255)
                                                       cATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTa                                                                                   <  2:1000032/141‑1 (MQ=255)
                                                       cATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTa                                                                                   <  2:1000261/141‑1 (MQ=255)
                                                           ttGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAAAGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTaaaaa                                                                               <  2:885685/141‑4 (MQ=255)
                                                             gATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAg                                                                             >  1:636747/1‑141 (MQ=255)
                                                             gATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAg                                                                             >  1:221180/1‑141 (MQ=255)
                                                              aTCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGc                                                                            >  1:288441/1‑141 (MQ=255)
                                                                   aaTTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCaa                                                                       >  1:287593/1‑141 (MQ=255)
                                                                     ttAACAGTCATATTTTTCACTCCTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATCATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCaaaa                                                                     <  1:429206/141‑1 (MQ=255)
                                                                      tAACAGTCATATTGTTCTATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAAt                                                                    <  2:205311/141‑1 (MQ=255)
                                                                         cAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAGATTGATCTGCTTTTAATGAAGCACCAAAATTAc                                                                 >  1:92495/1‑141 (MQ=255)
                                                                         cAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTAc                                                                 >  2:90179/1‑141 (MQ=255)
                                                                          aGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTAcc                                                                >  2:734200/1‑141 (MQ=255)
                                                                           ttCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCa                                                               <  2:551468/140‑1 (MQ=255)
                                                                            tCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCAt                                                              >  1:586556/1‑141 (MQ=255)
                                                                            tCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCAt                                                              >  1:729689/1‑141 (MQ=255)
                                                                                atTTTTCATTACTTTTCTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGtt                                                          >  2:556000/1‑141 (MQ=255)
                                                                                 tttttCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTa                                                         <  1:978135/141‑1 (MQ=255)
                                                                                 tttttCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTa                                                         <  1:616030/141‑1 (MQ=255)
                                                                                 tttttCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTa                                                         >  2:1042888/1‑141 (MQ=255)
                                                                                    ttCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCg                                                      <  1:939048/141‑1 (MQ=255)
                                                                                     tccaTACTGTACTGTCTTCATTACCATTAGGGCATGTTGTAGTTAATGAATCATTAACGTAAGTTCCACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGa                                                     >  2:327046/4‑141 (MQ=255)
                                                                                     tCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGa                                                     >  1:780516/1‑141 (MQ=255)
                                                                                         tactgtactgTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTc                                                 >  2:852545/1‑141 (MQ=255)
                                                                                         tactgtactgTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTc                                                 <  1:1038623/141‑1 (MQ=255)
                                                                                          tctgttctgtCTTCATTACCATTCGGGAATGTTGTCGTTAATGAATTATTAACTTAAGTTACACCTTGTGTTAATGTTACTTTATATTTAAATTGATCTGCTTTTAATGAAGCATCAAAATTACCATAGTTACCGATTTCa                                                >  2:299012/2‑141 (MQ=255)
                                                                                          actgtactgtCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCa                                                >  1:37780/1‑141 (MQ=255)
                                                                                           ctgtactgtCTTCATTACCATTAGGTAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAg                                               <  2:590019/141‑1 (MQ=255)
                                                                                             gtactgtCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTa                                             >  2:747677/1‑141 (MQ=255)
                                                                                               actgtCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTAtt                                           <  2:338029/141‑1 (MQ=255)
                                                                                                ctgtCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTa                                          >  2:326020/1‑141 (MQ=255)
                                                                                                ctgtCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTCTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTa                                          >  1:854843/1‑141 (MQ=255)
                                                                                                  gtCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTTCTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAAt                                        >  2:625671/1‑141 (MQ=255)
                                                                                                     ttCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGt                                     >  2:557262/1‑141 (MQ=255)
                                                                                                     ttCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGt                                     >  2:621509/1‑141 (MQ=255)
                                                                                                        aTTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTCCCGATTTCAGTATTAATAGtata                                  <  1:1068349/141‑1 (MQ=255)
                                                                                                          tACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATAtt                                >  2:206811/1‑141 (MQ=255)
                                                                                                          tACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATAtt                                <  1:92095/141‑1 (MQ=255)
                                                                                                          tACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATAtt                                <  2:5250/141‑1 (MQ=255)
                                                                                                            ccATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCt                              >  2:83175/1‑141 (MQ=255)
                                                                                                            ccATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCt                              <  1:599203/141‑1 (MQ=255)
                                                                                                              aTTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCttt                            <  2:96687/141‑1 (MQ=255)
                                                                                                               ttAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTa                           <  1:183337/141‑1 (MQ=255)
                                                                                                                 aGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTAtt                         >  1:60900/1‑141 (MQ=255)
                                                                                                                     aaTGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTa                     <  2:738332/141‑1 (MQ=255)
                                                                                                                     aaTGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTa                     >  2:7398/1‑141 (MQ=255)
                                                                                                                      aTGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAg                    >  2:474312/1‑141 (MQ=255)
                                                                                                                        gttgtAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGtt                  <  2:194992/141‑1 (MQ=255)
                                                                                                                        gttgtAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGtt                  <  1:262758/141‑1 (MQ=255)
                                                                                                                            tAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGTTGCtt              >  2:13238/1‑141 (MQ=255)
                                                                                                                             aGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGTTGCttt             >  1:142886/1‑141 (MQ=255)
                                                                                                                             aGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGTTGCttt             >  1:189255/1‑141 (MQ=255)
                                                                                                                                 aaTGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGTTGCTTTCGGt         >  2:421710/1‑141 (MQ=255)
                                                                                                                                     aaTTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGTTGCTTTCGGTGCTa     >  2:483544/1‑141 (MQ=255)
                                                                                                                                     aaTTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGTTGCTTTCGGTGCTa     <  1:326020/141‑1 (MQ=255)
                                                                                                                                      attattAACGTAAGTTACACCTTGTGGTAATGTTACTTCCTATTGAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGTTGCTTTCGGTGCTaa    >  1:792635/1‑141 (MQ=255)
                                                                                                                                        tattaACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGTTGCTTTCGGTGCTAAAt  >  2:701948/1‑141 (MQ=255)
                                                                                                                                        tattaACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGTTGCTTTCGGTGCTAAAt  <  1:734200/141‑1 (MQ=255)
                                                                                                                                        tattaACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATAACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGTTGCTTTCGGTGCTAAAt  <  2:802607/141‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                            
GTGTGTGTACCACGTGCCGTTGTCACACCTTGGCTTGTAAATGTAACTTTATTTGCATTTTGATCATAATTAACAGTCATATTTTTCAATACTGTACTGTCTTCATTACCATTAGGGAATGTTGTAGTTAATGAATTATTAACGTAAGTTACACCTTGTGGTAATGTTACTTCATATTTAAATTGATCTGCTTTTAATGAAGCACCAAAATTACCATTGTTACCGATTTCAGTATTAATAGTATATTCTTTATTGTTAGTTGCTTTCGGTGCTAAAT  >  CP000730/2284664‑2284940

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: