| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 365,528 | C→T | 5.1% | G367D (GGT→GAT) | USA300HOU_0334 ← | SSS family solute:sodium (Na+) symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 365,528 | 0 | C | T | 5.1% | 313.5 / 3.7 | 98 | G367D (GGT→GAT) | USA300HOU_0334 | SSS family solute:sodium (Na+) symporter |
| Reads supporting (aligned to +/- strand): ref base C (38/55); new base T (2/3); total (40/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.61e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
CGAATAATCCAGTCACAAACAAGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAATGGTGGCATCTCAGTCAAA > CP000730/365388‑365668 | cGAATAATCCAGTCACAAACAAGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATTATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTAc > 2:876761/1‑141 (MQ=255)cGAATAATCCAGTCACAAACAAGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTAc > 1:797302/1‑141 (MQ=255)cGAATAATCCAGTCACAAACAAGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTAc < 2:1078215/141‑1 (MQ=255) gAATAATCCAGTCACAAACAAGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTAcc > 1:607000/1‑141 (MQ=255) gAATAATCCAGACACAAACAAGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTAcc < 2:238027/141‑1 (MQ=255) aataatCCAGTCACAAACAAGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCt < 1:936542/141‑1 (MQ=255) ataatCCAGTCACAAACAAGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCtt > 2:472688/1‑141 (MQ=255) aatCCAGTCACAAACAAGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCtttt > 1:390792/1‑141 (MQ=255) atCCAGTCACAAACAAGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTc < 2:737608/141‑1 (MQ=255) cAGTCACAAACAAGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCga < 2:775084/141‑1 (MQ=255) acaaacaaGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGaagaag > 1:512410/1‑141 (MQ=255) caaacaaGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGc > 2:88632/1‑141 (MQ=255) acaaGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGtt > 1:185568/1‑141 (MQ=255) caaGAATAAATCCCATAAGTCATTTNAATTAGANGCANTTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAANCGTTg > 1:79441/1‑141 (MQ=255) caaGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTg < 2:62782/141‑1 (MQ=255) aTAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATGATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTATCTTTTCCGAAGAAGCGTTGCTTaa > 2:535671/1‑141 (MQ=255) tAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAAt > 1:112661/1‑141 (MQ=255) aaaTCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAACCCGACAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATg < 1:19702/141‑1 (MQ=255) aaaTCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATg > 2:627933/1‑141 (MQ=255) aaTCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGt < 1:428978/141‑1 (MQ=255) aaTCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGt < 2:686188/141‑1 (MQ=255) aaTCCCATAAGTCACTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCGTTTCCGAAGAAGCGTTGCTTAATGt < 1:359917/141‑1 (MQ=255) cccTTAAGTCATGTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCACTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGa < 2:224901/141‑1 (MQ=255) cccATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCACTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGa < 2:745346/141‑1 (MQ=255) ccATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGAt > 1:872388/1‑141 (MQ=255) ccATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGAt > 2:434890/1‑141 (MQ=255) aTAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTg < 2:302102/141‑1 (MQ=255) gTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAAt < 2:1021319/141‑1 (MQ=255) tGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGc < 1:666766/141‑1 (MQ=255) tGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGc > 1:221229/1‑141 (MQ=255) gAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATGATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTATCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCa < 1:865888/141‑1 (MQ=255) aaTTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAg > 2:410383/1‑141 (MQ=255) aaGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAg < 2:694591/141‑1 (MQ=255) aaGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAg < 2:936570/141‑1 (MQ=255) aGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGa < 2:958761/141‑1 (MQ=255) aGCAATTAAGTAGAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGa < 2:795507/141‑1 (MQ=255) aaTTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAAtt < 1:714693/141‑1 (MQ=255) aaTTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAAtt > 1:900222/1‑141 (MQ=255) aaTTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAAtt > 1:140292/1‑141 (MQ=255) aaTTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAAtt < 2:808836/141‑1 (MQ=255) aTTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGCAAAGTTGATTAATGACGATTGAAATACAAGCAGATATAGAAttt < 2:322496/141‑1 (MQ=255) aTTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAAttt > 1:887992/1‑141 (MQ=255) aaGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTaaa > 2:640037/1‑141 (MQ=255) aaGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTaaa > 1:498293/1‑141 (MQ=255) aGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTaaaa > 2:850576/1‑140 (MQ=255) gTATAGTGACATTCCAAAACCGAAAATACCTGCACTGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACt > 1:639775/1‑141 (MQ=255) tataGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAAAGTGCAAAGTTAAATTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTa > 2:762296/1‑141 (MQ=255) cATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAAt > 2:342818/1‑141 (MQ=255) aTTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTACTGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATg > 1:630914/1‑141 (MQ=255) aTTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATg < 1:66608/141‑1 (MQ=255) tCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGt < 1:804813/141‑1 (MQ=255) cAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAg < 1:404987/141‑1 (MQ=255) aaCCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACt > 2:1068215/1‑141 (MQ=255) aCCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACtg < 1:242371/141‑1 (MQ=255) ccGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACtgt > 2:67429/1‑141 (MQ=255) ccGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACtgt > 2:1026869/1‑141 (MQ=255) aaaTACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATACAATTTAAACTAGATGAAATGGTAGACTGTGCAg < 1:564788/141‑1 (MQ=255) aaTACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAgc > 1:85167/1‑141 (MQ=255) tACCTGCAATGATGATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTATCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAgcgg < 2:256990/141‑1 (MQ=255) tACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAgcgg < 2:519670/141‑1 (MQ=255) ccTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAgcggcg < 2:175221/141‑1 (MQ=255) ccTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAgcggcg < 1:661969/141‑1 (MQ=255) cTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGa < 2:872388/141‑1 (MQ=255) gCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAgccattttc < 2:679870/141‑8 (MQ=255) aaTGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAgccattttcgc < 2:254155/141‑10 (MQ=255) gATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGc < 1:831805/141‑1 (MQ=255) ataagaATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGCCTGTGCAGCGGCGACAACGGCt < 2:753613/141‑1 (MQ=255) gataatGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTATCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGc < 1:774310/140‑1 (MQ=255) taatGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCaa > 2:341371/1‑141 (MQ=255) aatGAAACGTGCACAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAAAGGCTGCAAt > 2:1024301/1‑141 (MQ=255) aatGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAAt > 1:343662/1‑141 (MQ=255) tGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATaa < 2:702024/141‑1 (MQ=255) aaaCGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGt < 1:229992/141‑1 (MQ=255) aaCGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTa > 2:423363/1‑141 (MQ=255) aaCGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTa > 2:302263/1‑141 (MQ=255) aaCGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTa < 2:669358/141‑1 (MQ=255) cGTGCAAAGTTAACTTCGTGTCGCTCGCTATCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATACGTAAt > 1:416527/1‑141 (MQ=255) gCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCt > 2:828849/1‑141 (MQ=255) aaaGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGc > 1:265680/1‑141 (MQ=255) aaGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCt < 2:591932/141‑1 (MQ=255) aaGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCt < 2:715505/141‑1 (MQ=255) aaGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCt < 1:595943/141‑1 (MQ=255) aaGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGGGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCt < 1:845825/141‑1 (MQ=255) aaGTTAACTTCGTGTCGCTCACTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCt > 2:45029/1‑141 (MQ=255) ttAACTTCGTGTCGCGCGCTACCTTGTGCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGAGATAGAAGTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAAGAAGTAATCCTGCTACa < 2:212856/141‑1 (MQ=255) aCTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAAt < 1:117544/141‑1 (MQ=255) cTTCGTGTCTCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAAtg < 2:188716/141‑1 (MQ=255) tCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAAtggt < 1:459191/141‑1 (MQ=255) cGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAAtggtg < 2:972183/141‑1 (MQ=255) gtgtCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAGTCCTGCTACAAAtggtgg < 1:298630/141‑1 (MQ=255) gtgtCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAAtggtgg < 2:123310/141‑1 (MQ=255) cgctcgctACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAAtggtggaaaa < 2:953729/141‑5 (MQ=255) cgctcgctACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAATGGTGGCAtc < 2:721422/141‑1 (MQ=255) gctcgctACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAATGGTGGCAtct > 1:489404/1‑141 (MQ=255) tcgctACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAATGGTGGCATCTCa < 1:593889/141‑1 (MQ=255) gctACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAATGGTGGCATCTCAGt < 2:457682/141‑1 (MQ=255) ctACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAATGGTGGCATCTCAGTc < 1:497219/141‑1 (MQ=255) aCCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAATGGTGGCATCTCAGTCaa > 2:448916/1‑141 (MQ=255) aCCTTTTCCGAAGAAGCGTTGCTTAATGTCGACTGAAATACAAGCAGATATAGAAATTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAATGGTGGCATCTCAGTCaa < 1:812709/141‑1 (MQ=255) ccTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAATGGTGGCATCTCGGTCaaa < 2:215081/141‑1 (MQ=255) | CGAATAATCCAGTCACAAACAAGAATAAATCCCATAAGTCATTTGAATTAGAAGCAATTAAGTATAGTGACATTCCAAAACCGAAAATACCTGCAATGATAATAATGAAACGTGCAAAGTTAACTTCGTGTCGCTCGCTACCTTTTCCGAAGAAGCGTTGCTTAATGTCGATTGAAATACAAGCAGATATAGAATTTAAACTAGATGAAATGGTAGACTGTGCAGCGGCGAAAATGGCTGCAATAAGTAATCCTGCTACAAATGGTGGCATCTCAGTCAAA > CP000730/365388‑365668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |