New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1502317 =	57 (1.120)	3 (0.060)	3/270	5.2	5.3%	intergenic (‑294/+104)	ebh/norB	extracellular matrix binding protein/MFS family major facilitator transporter
	?	CP000730	1502366 =	52 (1.060)					intergenic (‑343/+55)	ebh/norB	extracellular matrix binding protein/MFS family major facilitator transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TATTGAAACACATTACAACTATGTGTTGAACAATTTATTTATGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGTTTTGTTTAGGCACAAGT  >  CP000730/1502178‑1502454                                                                                                                                            |                                                                                                                                          tATTGAAACACATTACAACTATGTGTTGAACAATTTATTTATGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATaaaaa                                                                                                                                          >  1:494520/1‑141 (MQ=255) tATTGAAACACATTACAACTATGTGTTGAACAATTTATTTATGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATaaaaa                                                                                                                                          >  1:202601/1‑141 (MQ=255)    tGAAACACATTACAACTATGTGTTGAACAATTTATTTATGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAAcc                                                                                                                                       <  2:360268/141‑1 (MQ=255)     gAAACACATTACAACTATGTGTTGAACAATTTATTTATGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCa                                                                                                                                      >  1:172825/1‑141 (MQ=255)          acaTTACAACTATGTGTTGAACAATTTATTTATGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATccc                                                                                                                                 <  1:453518/141‑1 (MQ=255)                    tATGTGTTGAACAATTTATTTATGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCAtt                                                                                                                       <  2:543298/141‑1 (MQ=255)                    tATGTGTTGAACAATCTATTTATGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCAtt                                                                                                                       <  1:470987/141‑1 (MQ=255)                      tgtgTTGAACAATTTATTTATGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTa                                                                                                                     <  1:366928/141‑1 (MQ=255)                       gtgtTGAACAATTTATTTATGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTaa                                                                                                                    <  2:55573/141‑1 (MQ=255)                            gAACAATTTATTTATGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAaataa                                                                                                               >  2:248640/1‑141 (MQ=255)                                   ttatttatGCTCCAGAATATAATAACACAAAATGTAGTGTAAGTTAAATTTAAGTTGGGATAATTGAGAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGAcaca                                                                                                        <  1:227267/141‑1 (MQ=255)                                   ttatttatGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGAcaca                                                                                                        <  1:346884/141‑1 (MQ=255)                                      tttatGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATaa                                                                                                     >  2:410759/1‑141 (MQ=255)                                      tttatGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATaa                                                                                                     >  2:435665/1‑141 (MQ=255)                                      tttatGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATaa                                                                                                     >  2:512621/1‑141 (MQ=255)                                       ttatGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTAAATTTGTGACAATTTATAAAAAGCTTAAATAAAGAAGCATGAAATAGTAATAAATGTCTAATCCCTATGTTTGTTTAAAATAATGACACATaaa                                                                                                    >  1:340183/1‑140 (MQ=255)                                        tatGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGa                                                                                                   <  1:366102/141‑1 (MQ=255)                                                   atatAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTtata                                                                                        <  2:106135/141‑1 (MQ=255)                                                    tataATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTatat                                                                                       >  2:84154/1‑141 (MQ=255)                                                    tataATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTatat                                                                                       >  2:101110/1‑141 (MQ=255)                                                      taataaCACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATAttt                                                                                     >  1:100904/1‑141 (MQ=255)                                                      taataaCACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATAttt                                                                                     >  2:535023/1‑141 (MQ=255)                                                      taataaCACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATAttt                                                                                     >  1:156144/1‑141 (MQ=255)                                                      taataaCACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATAttt                                                                                     >  2:352505/1‑141 (MQ=255)                                                        ataaCACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATAttttt                                                                                   >  1:41366/1‑141 (MQ=255)                                                        ataaCACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATAttttt                                                                                   >  1:352656/1‑141 (MQ=255)                                                          aaCACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGt                                                                                 <  2:172825/141‑1 (MQ=255)                                                           acacAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGCAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGtt                                                                                >  2:1934/1‑141 (MQ=255)                                                           acacAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGCAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGtt                                                                                >  1:139183/1‑141 (MQ=255)                                                             acaAAATATAGTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTa                                                                              <  2:296583/141‑1 (MQ=255)                                                                  atatatTGTAAGGTAAATTGAATTTGTGACAATTTATAATAAGTAGAAAGAAATTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATAtt                                                                         <  1:196551/141‑1 (MQ=255)                                                                     tatTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTa                                                                      >  1:166869/1‑141 (MQ=255)                                                                                               cAATTTATAATAATTATAAGTAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAAtt                                            >  1:274745/1‑141 (MQ=255)                                                                                               cAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAAtt                                            >  2:328344/1‑141 (MQ=255)                                                                                               cAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAAtt                                            >  2:536560/1‑141 (MQ=255)                                                                                                aaTTTATAATAATTATAAATAAAGTAGCGTAAACGAGTAATAAAAAACCAATCCCTATCTTCATTTAAAATCCACACCCATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATtc                                           <  1:198418/141‑1 (MQ=255)                                                                                                aaTTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATtc                                           <  1:212013/141‑1 (MQ=255)                                                                                                 aTTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATtct                                          >  2:239425/1‑141 (MQ=255)                                                                                                 aTTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATtct                                          >  1:198594/1‑141 (MQ=255)                                                                                                       aataatTATAAATAAAGTAGCGTAAAAAAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTa                                    <  2:190082/141‑1 (MQ=255)                                                                                                                  ataaaGCAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAg                         <  1:1934/141‑1 (MQ=255)                                                                                                                  ataaaGCAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAg                         <  2:139183/141‑1 (MQ=255)                                                                                                                       gTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCg                    >  1:175881/1‑141 (MQ=255)                                                                                                                        tAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGt                   <  1:84154/141‑1 (MQ=255)                                                                                                                        tAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGt                   <  1:101110/141‑1 (MQ=255)                                                                                                                         aGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGtt                  >  1:122987/1‑141 (MQ=255)                                                                                                                            gTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGTTTTg               <  2:463692/141‑1 (MQ=255)                                                                                                                               aaaGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGTTTTGttt            <  1:116979/141‑1 (MQ=255)                                                                                                                                aaGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGTTTTGTTTa           >  2:238595/1‑141 (MQ=255)                                                                                                                                       ataaAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGTTTTGTTTAGGCACaa    <  2:283721/141‑1 (MQ=255)                                                                                                                                       ataaAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGTTTTGTTTAGGCACaa    <  2:168976/141‑1 (MQ=255)                                                                                                                                        taaATAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGTTTTGTTTAGGCACAAg   <  1:352505/141‑1 (MQ=255)                                                                                                                                        taaAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGTTTTGTTTAGGCACAAg   <  2:100904/141‑1 (MQ=255)                                                                                                                                        taaAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGTTTTGTTTAGGCACAAg   <  1:535023/141‑1 (MQ=255)                                                                                                                                        taaAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGTTTTGTTTAGGCACAAg   <  2:156144/141‑1 (MQ=255)                                                                                                                                         aaaaaaCCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGTTTTGTTTAGGCACAAGt  >  2:434817/1‑141 (MQ=255)                                                                                                                                         aaaaaaCCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGTTTTGTTTAGGCACAAGt  >  2:441092/1‑141 (MQ=255)                                                                                                                                            |                                                                                                                                          TATTGAAACACATTACAACTATGTGTTGAACAATTTATTTATGCTCCAGAATATAATAACACAAAATATATTGTAAGGTAAATTGAATTTGTGACAATTTATAATAATTATAAATAAAGTAGCGTAAAAGAGTAATAAAAAACCAATCCCTATGTTCATTTAAAATAATGACACATAAGAATCGGTTTATATTTTTGTTTAATATTGTAGCGACTTGTATGATTTCAATTTAATTCTCAATTATCATAATTGAGTATCGTTTTGTTTAGGCACAAGT  >  CP000730/1502178‑1502454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.